Protein–RNA interactions for Protein: P28329

CHAT, Choline O-acetyltransferase, humanhuman

Predictions only

Length 748 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHATP28329 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
CHATP28329 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC12.73□□□□□ -0.37
CHATP28329 SMIM14-201ENST00000295958 6483 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CHATP28329 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CHATP28329 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC12.73□□□□□ -0.37
CHATP28329 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC12.73□□□□□ -0.37
CHATP28329 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC12.73□□□□□ -0.37
CHATP28329 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC12.73□□□□□ -0.37
CHATP28329 SUSD6-201ENST00000342745 5388 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CHATP28329 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
CHATP28329 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC12.73□□□□□ -0.37
CHATP28329 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
CHATP28329 GDPGP1-202ENST00000558017 5323 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
CHATP28329 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CHATP28329 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
CHATP28329 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
CHATP28329 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC12.72□□□□□ -0.37
CHATP28329 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
CHATP28329 UBA5-202ENST00000356232 3705 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CHATP28329 ZFYVE28-211ENST00000515312 3247 ntAPPRIS ALT2 TSL 2 BASIC12.72□□□□□ -0.37
CHATP28329 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CHATP28329 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC12.72□□□□□ -0.37
CHATP28329 DSE-201ENST00000331677 7237 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
CHATP28329 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC12.72□□□□□ -0.37
CHATP28329 GLIS3-201ENST00000324333 6667 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
CHATP28329 MED14-201ENST00000324817 7984 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CHATP28329 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CHATP28329 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
CHATP28329 DNM1-212ENST00000627543 4734 ntAPPRIS ALT1 TSL 5 BASIC12.72□□□□□ -0.37
CHATP28329 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CHATP28329 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CHATP28329 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CHATP28329 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
CHATP28329 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC12.72□□□□□ -0.37
CHATP28329 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC12.72□□□□□ -0.37
CHATP28329 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC12.72□□□□□ -0.37
CHATP28329 FAM86GP-201ENST00000448322 971 ntBASIC12.72□□□□□ -0.37
CHATP28329 RHOA-206ENST00000454011 889 ntTSL 2 BASIC12.72□□□□□ -0.37
CHATP28329 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC12.72□□□□□ -0.37
CHATP28329 FTH1-202ENST00000526640 786 ntTSL 2 BASIC12.72□□□□□ -0.37
CHATP28329 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC12.72□□□□□ -0.37
CHATP28329 ARL16-202ENST00000570561 768 ntTSL 2 BASIC12.72□□□□□ -0.37
CHATP28329 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC12.72□□□□□ -0.37
CHATP28329 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC12.72□□□□□ -0.37
CHATP28329 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC12.72□□□□□ -0.37
CHATP28329 AL049840.4-201ENST00000602422 811 ntBASIC12.72□□□□□ -0.37
CHATP28329 ADCY7-208ENST00000566433 2535 ntTSL 5 BASIC12.72□□□□□ -0.37
CHATP28329 ZNF541-202ENST00000314121 4631 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
CHATP28329 C11orf87-201ENST00000327419 5884 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CHATP28329 NXPH1-201ENST00000405863 2921 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CHATP28329 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
CHATP28329 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC12.72□□□□□ -0.37
CHATP28329 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CHATP28329 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CHATP28329 PRR34-201ENST00000396008 2817 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CHATP28329 CICP8-201ENST00000455800 2813 ntBASIC12.72□□□□□ -0.37
CHATP28329 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
CHATP28329 SMARCA5-201ENST00000283131 7923 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CHATP28329 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
CHATP28329 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC12.72□□□□□ -0.37
CHATP28329 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC12.72□□□□□ -0.37
CHATP28329 NFKB2-204ENST00000428099 3416 ntAPPRIS ALT1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CHATP28329 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC12.72□□□□□ -0.37
CHATP28329 PPP5D1-201ENST00000414155 1882 ntAPPRIS P5 TSL 2 BASIC12.72□□□□□ -0.37
CHATP28329 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CHATP28329 SRGAP3-201ENST00000360413 8415 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
CHATP28329 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC12.72□□□□□ -0.37
CHATP28329 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
CHATP28329 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
CHATP28329 KRT8P14-201ENST00000414254 1442 ntBASIC12.71□□□□□ -0.37
CHATP28329 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
CHATP28329 RIMBP2-201ENST00000261655 6321 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
CHATP28329 GABRB3-219ENST00000636466 4509 ntTSL 5 BASIC12.71□□□□□ -0.37
CHATP28329 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
CHATP28329 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC12.71□□□□□ -0.37
CHATP28329 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC12.71□□□□□ -0.37
CHATP28329 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
CHATP28329 CALHM1-201ENST00000329905 3053 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
CHATP28329 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
CHATP28329 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
CHATP28329 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC12.71□□□□□ -0.37
CHATP28329 NHLH2-202ENST00000369506 7226 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
CHATP28329 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
CHATP28329 HECTD1-203ENST00000553700 9080 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
CHATP28329 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
CHATP28329 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
CHATP28329 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
CHATP28329 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
CHATP28329 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
CHATP28329 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
CHATP28329 NUS1P3-201ENST00000423502 862 ntBASIC12.71□□□□□ -0.37
CHATP28329 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC12.71□□□□□ -0.37
CHATP28329 WDR53-203ENST00000429115 683 ntTSL 2 BASIC12.71□□□□□ -0.37
CHATP28329 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
CHATP28329 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC12.71□□□□□ -0.37
CHATP28329 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC12.71□□□□□ -0.37
CHATP28329 RARRES2P5-201ENST00000564013 466 ntBASIC12.71□□□□□ -0.37
CHATP28329 PRR29-204ENST00000577953 565 ntTSL 4 BASIC12.71□□□□□ -0.37
CHATP28329 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC12.71□□□□□ -0.37
CHATP28329 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC12.71□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms