Protein–RNA interactions for Protein: P25106

ACKR3, Atypical chemokine receptor 3, humanhuman

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACKR3P25106 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC12.95□□□□□ -0.34
ACKR3P25106 AC190387.1-201ENST00000551683 408 ntBASIC12.95□□□□□ -0.34
ACKR3P25106 AC140912.1-201ENST00000577171 1054 ntBASIC12.95□□□□□ -0.34
ACKR3P25106 MIR4745-201ENST00000577608 62 ntBASIC12.95□□□□□ -0.34
ACKR3P25106 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
ACKR3P25106 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC12.95□□□□□ -0.34
ACKR3P25106 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC12.95□□□□□ -0.34
ACKR3P25106 CU634019.7-201ENST00000624153 1185 ntBASIC12.95□□□□□ -0.34
ACKR3P25106 FP236241.2-201ENST00000624906 1185 ntBASIC12.95□□□□□ -0.34
ACKR3P25106 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC12.95□□□□□ -0.34
ACKR3P25106 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
ACKR3P25106 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
ACKR3P25106 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
ACKR3P25106 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
ACKR3P25106 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
ACKR3P25106 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC12.95□□□□□ -0.34
ACKR3P25106 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
ACKR3P25106 C4B-201ENST00000425700 5237 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
ACKR3P25106 COL4A3-202ENST00000396578 8097 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
ACKR3P25106 NFKB2-204ENST00000428099 3416 ntAPPRIS ALT1 TSL 1 (best) BASIC12.95□□□□□ -0.34
ACKR3P25106 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
ACKR3P25106 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
ACKR3P25106 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC12.95□□□□□ -0.34
ACKR3P25106 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
ACKR3P25106 SLC37A4-216ENST00000538950 2032 ntTSL 5 BASIC12.95□□□□□ -0.34
ACKR3P25106 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC12.95□□□□□ -0.34
ACKR3P25106 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
ACKR3P25106 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC12.94□□□□□ -0.34
ACKR3P25106 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
ACKR3P25106 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
ACKR3P25106 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
ACKR3P25106 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
ACKR3P25106 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
ACKR3P25106 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
ACKR3P25106 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC12.94□□□□□ -0.34
ACKR3P25106 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC12.94□□□□□ -0.34
ACKR3P25106 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
ACKR3P25106 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC12.94□□□□□ -0.34
ACKR3P25106 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC12.94□□□□□ -0.34
ACKR3P25106 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
ACKR3P25106 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC12.94□□□□□ -0.34
ACKR3P25106 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
ACKR3P25106 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
ACKR3P25106 LRRC59-203ENST00000576448 1531 ntBASIC12.94□□□□□ -0.34
ACKR3P25106 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
ACKR3P25106 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
ACKR3P25106 TARDBP-201ENST00000240185 5367 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
ACKR3P25106 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC12.94□□□□□ -0.34
ACKR3P25106 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
ACKR3P25106 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
ACKR3P25106 AC027601.5-201ENST00000624065 2482 ntBASIC12.94□□□□□ -0.34
ACKR3P25106 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
ACKR3P25106 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
ACKR3P25106 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
ACKR3P25106 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC12.94□□□□□ -0.34
ACKR3P25106 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
ACKR3P25106 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
ACKR3P25106 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
ACKR3P25106 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
ACKR3P25106 ACKR1-201ENST00000368121 1240 ntBASIC12.94□□□□□ -0.34
ACKR3P25106 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
ACKR3P25106 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC12.94□□□□□ -0.34
ACKR3P25106 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC12.94□□□□□ -0.34
ACKR3P25106 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC12.94□□□□□ -0.34
ACKR3P25106 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
ACKR3P25106 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC12.94□□□□□ -0.34
ACKR3P25106 UBE3A-204ENST00000438097 8939 ntAPPRIS P3 TSL 5 BASIC12.94□□□□□ -0.34
ACKR3P25106 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC12.94□□□□□ -0.34
ACKR3P25106 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
ACKR3P25106 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
ACKR3P25106 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.34
ACKR3P25106 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC12.94□□□□□ -0.34
ACKR3P25106 AP001063.1-201ENST00000568332 529 ntBASIC12.94□□□□□ -0.34
ACKR3P25106 AC004466.1-201ENST00000599515 1080 ntBASIC12.94□□□□□ -0.34
ACKR3P25106 ATF5-205ENST00000600336 682 ntTSL 2 BASIC12.94□□□□□ -0.34
ACKR3P25106 YTHDF3-AS1-201ENST00000603538 718 ntBASIC12.94□□□□□ -0.34
ACKR3P25106 AL355385.1-201ENST00000606123 409 ntBASIC12.94□□□□□ -0.34
ACKR3P25106 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
ACKR3P25106 SCARF1-201ENST00000263071 3443 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
ACKR3P25106 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
ACKR3P25106 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
ACKR3P25106 TET2-207ENST00000513237 10166 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
ACKR3P25106 TET2-209ENST00000540549 10166 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
ACKR3P25106 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC12.94□□□□□ -0.34
ACKR3P25106 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC12.94□□□□□ -0.34
ACKR3P25106 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC12.94□□□□□ -0.34
ACKR3P25106 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
ACKR3P25106 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
ACKR3P25106 TNN-203ENST00000622870 3719 ntTSL 5 BASIC12.94□□□□□ -0.34
ACKR3P25106 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
ACKR3P25106 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
ACKR3P25106 AC015802.1-201ENST00000588104 1449 ntBASIC12.94□□□□□ -0.34
ACKR3P25106 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
ACKR3P25106 ELK4-202ENST00000357992 10239 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
ACKR3P25106 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
ACKR3P25106 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
ACKR3P25106 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC12.94□□□□□ -0.34
ACKR3P25106 LHX1-201ENST00000614239 3425 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
ACKR3P25106 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
ACKR3P25106 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC12.94□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 54.3 ms