Protein–RNA interactions for Protein: P16410

CTLA4, Cytotoxic T-lymphocyte protein 4, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTLA4P16410 GSN-209ENST00000449733 2702 ntTSL 2 BASIC13.17□□□□□ -0.3
CTLA4P16410 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC13.17□□□□□ -0.3
CTLA4P16410 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CTLA4P16410 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CTLA4P16410 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CTLA4P16410 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CTLA4P16410 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
CTLA4P16410 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC13.17□□□□□ -0.3
CTLA4P16410 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CTLA4P16410 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
CTLA4P16410 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC13.17□□□□□ -0.3
CTLA4P16410 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC13.17□□□□□ -0.3
CTLA4P16410 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC13.17□□□□□ -0.3
CTLA4P16410 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC13.17□□□□□ -0.3
CTLA4P16410 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CTLA4P16410 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC13.17□□□□□ -0.3
CTLA4P16410 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
CTLA4P16410 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
CTLA4P16410 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CTLA4P16410 VPS18-202ENST00000558474 873 ntTSL 3 BASIC13.17□□□□□ -0.3
CTLA4P16410 GREM1-201ENST00000560677 623 ntTSL 4 BASIC13.17□□□□□ -0.3
CTLA4P16410 RN7SL48P-201ENST00000579283 293 ntBASIC13.17□□□□□ -0.3
CTLA4P16410 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC13.17□□□□□ -0.3
CTLA4P16410 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC13.17□□□□□ -0.3
CTLA4P16410 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
CTLA4P16410 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC13.17□□□□□ -0.3
CTLA4P16410 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CTLA4P16410 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC13.17□□□□□ -0.3
CTLA4P16410 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC13.17□□□□□ -0.3
CTLA4P16410 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC13.17□□□□□ -0.3
CTLA4P16410 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
CTLA4P16410 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
CTLA4P16410 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
CTLA4P16410 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CTLA4P16410 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC13.17□□□□□ -0.3
CTLA4P16410 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CTLA4P16410 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
CTLA4P16410 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
CTLA4P16410 RN7SL832P-201ENST00000607781 1756 ntBASIC13.17□□□□□ -0.3
CTLA4P16410 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC13.17□□□□□ -0.3
CTLA4P16410 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CTLA4P16410 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC13.17□□□□□ -0.3
CTLA4P16410 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC13.17□□□□□ -0.3
CTLA4P16410 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC13.17□□□□□ -0.3
CTLA4P16410 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC13.17□□□□□ -0.3
CTLA4P16410 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CTLA4P16410 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CTLA4P16410 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
CTLA4P16410 FKBP4P6-201ENST00000457486 1332 ntBASIC13.16□□□□□ -0.3
CTLA4P16410 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CTLA4P16410 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CTLA4P16410 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CTLA4P16410 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC13.16□□□□□ -0.3
CTLA4P16410 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC13.16□□□□□ -0.3
CTLA4P16410 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
CTLA4P16410 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CTLA4P16410 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CTLA4P16410 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC13.16□□□□□ -0.3
CTLA4P16410 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
CTLA4P16410 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
CTLA4P16410 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CTLA4P16410 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC13.16□□□□□ -0.3
CTLA4P16410 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
CTLA4P16410 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CTLA4P16410 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CTLA4P16410 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
CTLA4P16410 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC13.16□□□□□ -0.3
CTLA4P16410 PNKD-204ENST00000436005 978 ntTSL 5 BASIC13.16□□□□□ -0.3
CTLA4P16410 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC13.16□□□□□ -0.3
CTLA4P16410 AL391280.1-201ENST00000506969 1062 ntBASIC13.16□□□□□ -0.3
CTLA4P16410 NEU3-203ENST00000529024 581 ntTSL 3 BASIC13.16□□□□□ -0.3
CTLA4P16410 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC13.16□□□□□ -0.3
CTLA4P16410 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC13.16□□□□□ -0.3
CTLA4P16410 COX11-202ENST00000571584 1108 ntTSL 2 BASIC13.16□□□□□ -0.3
CTLA4P16410 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CTLA4P16410 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC13.16□□□□□ -0.3
CTLA4P16410 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC13.16□□□□□ -0.3
CTLA4P16410 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC13.16□□□□□ -0.3
CTLA4P16410 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC13.16□□□□□ -0.3
CTLA4P16410 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
CTLA4P16410 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CTLA4P16410 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CTLA4P16410 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CTLA4P16410 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CTLA4P16410 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
CTLA4P16410 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CTLA4P16410 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
CTLA4P16410 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CTLA4P16410 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
CTLA4P16410 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC13.16□□□□□ -0.3
CTLA4P16410 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CTLA4P16410 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CTLA4P16410 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
CTLA4P16410 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
CTLA4P16410 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CTLA4P16410 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
CTLA4P16410 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CTLA4P16410 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CTLA4P16410 AC215219.1-201ENST00000400706 1817 ntBASIC13.16□□□□□ -0.3
CTLA4P16410 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC13.15□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms