Protein–RNA interactions for Protein: P04437

TCRA, T-cell receptor alpha chain V region CTL-L17, humanhuman

Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRAP04437 EDEM3-201ENST00000318130 6898 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
TCRAP04437 NRXN1-207ENST00000404971 7578 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
TCRAP04437 KCNAB2-219ENST00000602612 2396 ntTSL 2 BASIC11.33□□□□□ -0.6
TCRAP04437 C7orf57-204ENST00000435376 1925 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
TCRAP04437 C7orf57-206ENST00000539619 1927 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
TCRAP04437 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC11.33□□□□□ -0.6
TCRAP04437 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC11.33□□□□□ -0.6
TCRAP04437 ATRIP-204ENST00000412052 2721 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
TCRAP04437 GSN-209ENST00000449733 2702 ntTSL 2 BASIC11.33□□□□□ -0.6
TCRAP04437 GPT2-201ENST00000340124 3984 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
TCRAP04437 AC215219.1-201ENST00000400706 1817 ntBASIC11.33□□□□□ -0.6
TCRAP04437 MPZ-204ENST00000491222 1824 ntTSL 2 BASIC11.33□□□□□ -0.6
TCRAP04437 MST1-202ENST00000449682 2621 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
TCRAP04437 HAGLR-202ENST00000416928 4235 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
TCRAP04437 CDK20-201ENST00000325303 2175 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
TCRAP04437 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
TCRAP04437 RERG-209ENST00000546331 1383 ntTSL 2 BASIC11.33□□□□□ -0.6
TCRAP04437 SHROOM1-203ENST00000378679 4019 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
TCRAP04437 CETP-203ENST00000566128 1733 ntTSL 5 BASIC11.33□□□□□ -0.6
TCRAP04437 PCMTD2-204ENST00000369758 3212 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
TCRAP04437 PGAP2-201ENST00000278243 2062 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
TCRAP04437 NR3C1-201ENST00000231509 3556 ntAPPRIS ALT1 TSL 1 (best) BASIC11.33□□□□□ -0.6
TCRAP04437 CHD1-212ENST00000614616 8095 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
TCRAP04437 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
TCRAP04437 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC11.33□□□□□ -0.6
TCRAP04437 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
TCRAP04437 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC11.33□□□□□ -0.6
TCRAP04437 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC11.33□□□□□ -0.6
TCRAP04437 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
TCRAP04437 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
TCRAP04437 AC004945.1-201ENST00000416738 983 ntBASIC11.33□□□□□ -0.6
TCRAP04437 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC11.33□□□□□ -0.6
TCRAP04437 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC11.33□□□□□ -0.6
TCRAP04437 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
TCRAP04437 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC11.33□□□□□ -0.6
TCRAP04437 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
TCRAP04437 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC11.33□□□□□ -0.6
TCRAP04437 MIR6074-201ENST00000612054 107 ntBASIC11.33□□□□□ -0.6
TCRAP04437 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
TCRAP04437 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
TCRAP04437 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
TCRAP04437 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC11.33□□□□□ -0.6
TCRAP04437 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC11.33□□□□□ -0.6
TCRAP04437 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC11.33□□□□□ -0.6
TCRAP04437 FLJ40288-201ENST00000332558 1998 ntTSL 2 BASIC11.33□□□□□ -0.6
TCRAP04437 PSEN2-202ENST00000366783 2306 ntAPPRIS P3 TSL 5 BASIC11.33□□□□□ -0.6
TCRAP04437 NUP153-203ENST00000613258 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
TCRAP04437 PPP2R1A-201ENST00000322088 5380 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
TCRAP04437 REV1-202ENST00000393445 4686 ntAPPRIS ALT1 TSL 1 (best) BASIC11.33□□□□□ -0.6
TCRAP04437 SLC22A12-202ENST00000377567 2599 ntTSL 5 BASIC11.33□□□□□ -0.6
TCRAP04437 PATL2-208ENST00000560780 1863 ntAPPRIS ALT2 TSL 2 BASIC11.33□□□□□ -0.6
TCRAP04437 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
TCRAP04437 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
TCRAP04437 CYP4F3-201ENST00000221307 5050 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
TCRAP04437 TSEN2-202ENST00000402228 2149 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
TCRAP04437 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
TCRAP04437 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC11.33□□□□□ -0.6
TCRAP04437 SLC39A8-203ENST00000424970 4032 ntTSL 2 BASIC11.33□□□□□ -0.6
TCRAP04437 INTS14-201ENST00000313182 2393 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
TCRAP04437 GAB2-202ENST00000361507 6092 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
TCRAP04437 CPXM2-201ENST00000241305 3554 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
TCRAP04437 GMCL1-201ENST00000282570 4191 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
TCRAP04437 ZFYVE28-211ENST00000515312 3247 ntAPPRIS ALT2 TSL 2 BASIC11.33□□□□□ -0.6
TCRAP04437 PTK7-203ENST00000345201 4071 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
TCRAP04437 IRAK3-201ENST00000261233 8663 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
TCRAP04437 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
TCRAP04437 COL6A4P2-202ENST00000504443 2753 ntBASIC11.33□□□□□ -0.6
TCRAP04437 TSPEAR-AS2-202ENST00000354333 2422 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
TCRAP04437 NUTM2E-201ENST00000429984 3292 ntAPPRIS P5 TSL 5 BASIC11.33□□□□□ -0.6
TCRAP04437 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
TCRAP04437 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
TCRAP04437 TMUB2-211ENST00000589184 1837 ntTSL 5 BASIC11.32□□□□□ -0.6
TCRAP04437 CFAP46-202ENST00000368586 8278 ntAPPRIS P2 TSL 5 BASIC11.32□□□□□ -0.6
TCRAP04437 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC11.32□□□□□ -0.6
TCRAP04437 LDB3-209ENST00000623056 2314 ntTSL 5 BASIC11.32□□□□□ -0.6
TCRAP04437 CELF1-214ENST00000531165 3650 ntTSL 2 BASIC11.32□□□□□ -0.6
TCRAP04437 CILP2-201ENST00000291495 4199 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
TCRAP04437 PRR34-201ENST00000396008 2817 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
TCRAP04437 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
TCRAP04437 PATL2-201ENST00000434130 1950 ntAPPRIS P3 TSL 5 BASIC11.32□□□□□ -0.6
TCRAP04437 CROT-203ENST00000419147 2959 ntTSL 2 BASIC11.32□□□□□ -0.6
TCRAP04437 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC11.32□□□□□ -0.6
TCRAP04437 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
TCRAP04437 FAM90A12P-201ENST00000519497 2375 ntBASIC11.32□□□□□ -0.6
TCRAP04437 FAM90A24P-201ENST00000520792 2369 ntBASIC11.32□□□□□ -0.6
TCRAP04437 ARHGEF9-230ENST00000637178 2145 ntTSL 5 BASIC11.32□□□□□ -0.6
TCRAP04437 DGCR8-201ENST00000351989 4514 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
TCRAP04437 PRF1-202ENST00000441259 2533 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
TCRAP04437 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC11.32□□□□□ -0.6
TCRAP04437 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
TCRAP04437 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
TCRAP04437 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC11.32□□□□□ -0.6
TCRAP04437 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
TCRAP04437 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
TCRAP04437 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC11.32□□□□□ -0.6
TCRAP04437 CENPM-205ENST00000404067 905 ntTSL 3 BASIC11.32□□□□□ -0.6
TCRAP04437 MPV17-208ENST00000405076 603 ntTSL 5 BASIC11.32□□□□□ -0.6
TCRAP04437 CENPM-206ENST00000407253 818 ntTSL 2 BASIC11.32□□□□□ -0.6
TCRAP04437 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC11.32□□□□□ -0.6
TCRAP04437 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC11.32□□□□□ -0.6
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms