Protein–RNA interactions for Protein: O43924

PDE6D, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta, humanhuman

Predictions only

Length 150 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6DO43924 AC018712.1-201ENST00000455767 687 ntBASIC11.54□□□□□ -0.56
PDE6DO43924 KRT18P43-201ENST00000469825 1281 ntBASIC11.54□□□□□ -0.56
PDE6DO43924 AC092910.1-201ENST00000482027 1129 ntBASIC11.54□□□□□ -0.56
PDE6DO43924 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC11.54□□□□□ -0.56
PDE6DO43924 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
PDE6DO43924 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC11.54□□□□□ -0.56
PDE6DO43924 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC11.54□□□□□ -0.56
PDE6DO43924 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC11.54□□□□□ -0.56
PDE6DO43924 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC11.54□□□□□ -0.56
PDE6DO43924 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC11.54□□□□□ -0.56
PDE6DO43924 AL049597.2-201ENST00000565575 961 ntBASIC11.54□□□□□ -0.56
PDE6DO43924 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC11.54□□□□□ -0.56
PDE6DO43924 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
PDE6DO43924 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
PDE6DO43924 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC11.54□□□□□ -0.56
PDE6DO43924 AC004877.2-201ENST00000623941 599 ntBASIC11.54□□□□□ -0.56
PDE6DO43924 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC11.54□□□□□ -0.56
PDE6DO43924 AL590644.1-201ENST00000412427 4676 ntTSL 4 BASIC11.54□□□□□ -0.56
PDE6DO43924 PIAS1-202ENST00000545237 2932 ntTSL 2 BASIC11.54□□□□□ -0.56
PDE6DO43924 OS9-206ENST00000435406 2346 ntTSL 2 BASIC11.54□□□□□ -0.56
PDE6DO43924 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC11.54□□□□□ -0.56
PDE6DO43924 ZIK1-204ENST00000597850 4181 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
PDE6DO43924 KRT8P35-201ENST00000483942 1338 ntBASIC11.54□□□□□ -0.56
PDE6DO43924 TP53INP1-202ENST00000448464 5631 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
PDE6DO43924 AP002761.4-201ENST00000565433 3361 ntBASIC11.54□□□□□ -0.56
PDE6DO43924 ARHGAP31-201ENST00000264245 9317 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
PDE6DO43924 CPT1C-202ENST00000323446 2783 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
PDE6DO43924 LIMD1-202ENST00000440097 2773 ntTSL 5 BASIC11.54□□□□□ -0.56
PDE6DO43924 OSBPL2-201ENST00000313733 4009 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
PDE6DO43924 GUSBP11-206ENST00000455485 3816 ntTSL 2 BASIC11.54□□□□□ -0.56
PDE6DO43924 TRAK1-210ENST00000613405 4672 ntTSL 2 BASIC11.54□□□□□ -0.56
PDE6DO43924 AL365181.3-201ENST00000605886 3222 ntBASIC11.54□□□□□ -0.56
PDE6DO43924 OTP-201ENST00000306422 3669 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
PDE6DO43924 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
PDE6DO43924 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
PDE6DO43924 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
PDE6DO43924 DLG4-203ENST00000399510 3975 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
PDE6DO43924 RAB40A-202ENST00000372633 3126 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
PDE6DO43924 RAB6B-201ENST00000285208 5526 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
PDE6DO43924 PTK7-205ENST00000352931 4023 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
PDE6DO43924 PLCD4-202ENST00000417849 2738 ntAPPRIS P2 TSL 5 BASIC11.53□□□□□ -0.56
PDE6DO43924 FAAP100-202ENST00000425898 2996 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
PDE6DO43924 SLC52A1-203ENST00000512825 2989 ntTSL 2 BASIC11.53□□□□□ -0.56
PDE6DO43924 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC11.53□□□□□ -0.56
PDE6DO43924 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC11.53□□□□□ -0.56
PDE6DO43924 USP6NL-205ENST00000609104 11377 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
PDE6DO43924 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
PDE6DO43924 SRA1-201ENST00000336283 2107 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
PDE6DO43924 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
PDE6DO43924 DHX34-201ENST00000328771 4372 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
PDE6DO43924 TNC-212ENST00000542877 5517 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
PDE6DO43924 DDX31-202ENST00000372153 3285 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
PDE6DO43924 NECAP2-202ENST00000443980 1929 ntTSL 2 BASIC11.53□□□□□ -0.56
PDE6DO43924 COL1A1-201ENST00000225964 6727 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
PDE6DO43924 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
PDE6DO43924 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC11.53□□□□□ -0.56
PDE6DO43924 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
PDE6DO43924 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
PDE6DO43924 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
PDE6DO43924 HIST3H2BA-201ENST00000436555 524 ntBASIC11.53□□□□□ -0.56
PDE6DO43924 HNRNPDP1-201ENST00000439535 754 ntBASIC11.53□□□□□ -0.56
PDE6DO43924 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC11.53□□□□□ -0.56
PDE6DO43924 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC11.53□□□□□ -0.56
PDE6DO43924 AC004066.1-201ENST00000502488 802 ntBASIC11.53□□□□□ -0.56
PDE6DO43924 KRT19P2-202ENST00000557173 1012 ntBASIC11.53□□□□□ -0.56
PDE6DO43924 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
PDE6DO43924 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC11.53□□□□□ -0.56
PDE6DO43924 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
PDE6DO43924 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC11.53□□□□□ -0.56
PDE6DO43924 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC11.53□□□□□ -0.56
PDE6DO43924 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
PDE6DO43924 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC11.53□□□□□ -0.56
PDE6DO43924 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC11.53□□□□□ -0.56
PDE6DO43924 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC11.53□□□□□ -0.56
PDE6DO43924 RNF43-201ENST00000407977 5516 ntAPPRIS P1 TSL 2 BASIC11.53□□□□□ -0.56
PDE6DO43924 SMARCA4-205ENST00000450717 5506 ntTSL 5 BASIC11.53□□□□□ -0.56
PDE6DO43924 NTM-202ENST00000374786 3190 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
PDE6DO43924 FAM193A-201ENST00000324666 4846 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
PDE6DO43924 TRIM69-206ENST00000559390 2486 ntAPPRIS P1 TSL 2 BASIC11.53□□□□□ -0.56
PDE6DO43924 GSE1-203ENST00000405402 4366 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
PDE6DO43924 KHSRPP1-201ENST00000427983 1768 ntBASIC11.53□□□□□ -0.56
PDE6DO43924 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC11.53□□□□□ -0.56
PDE6DO43924 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC11.53□□□□□ -0.56
PDE6DO43924 SEMA7A-202ENST00000542748 3228 ntTSL 5 BASIC11.53□□□□□ -0.56
PDE6DO43924 FBLIM1-203ENST00000375771 3498 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
PDE6DO43924 ATG9B-203ENST00000469530 3489 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
PDE6DO43924 ARAP3-203ENST00000508305 4927 ntTSL 2 BASIC11.53□□□□□ -0.56
PDE6DO43924 ATP12A-201ENST00000218548 3732 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
PDE6DO43924 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC11.53□□□□□ -0.56
PDE6DO43924 MANBA-202ENST00000505239 2577 ntTSL 2 BASIC11.53□□□□□ -0.56
PDE6DO43924 PLCB1-218ENST00000629992 3095 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
PDE6DO43924 DHX37-201ENST00000308736 4550 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
PDE6DO43924 PRKAB1-201ENST00000229328 2610 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
PDE6DO43924 RUFY4-201ENST00000344321 2352 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
PDE6DO43924 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC11.53□□□□□ -0.56
PDE6DO43924 HMGCL-203ENST00000374490 1600 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
PDE6DO43924 PSD-202ENST00000406432 3861 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
PDE6DO43924 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC11.53□□□□□ -0.56
PDE6DO43924 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC11.53□□□□□ -0.56
PDE6DO43924 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms