Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 AL645937.2-201ENST00000396808 931 ntBASIC12.93□□□□□ -0.34
SHISA3A0PJX4 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC12.93□□□□□ -0.34
SHISA3A0PJX4 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC12.93□□□□□ -0.34
SHISA3A0PJX4 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC12.93□□□□□ -0.34
SHISA3A0PJX4 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC12.93□□□□□ -0.34
SHISA3A0PJX4 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
SHISA3A0PJX4 AC026434.2-201ENST00000506094 1078 ntBASIC12.93□□□□□ -0.34
SHISA3A0PJX4 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC12.93□□□□□ -0.34
SHISA3A0PJX4 PGAM5P1-201ENST00000518923 814 ntBASIC12.93□□□□□ -0.34
SHISA3A0PJX4 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC12.93□□□□□ -0.34
SHISA3A0PJX4 TBCE-207ENST00000543662 2117 ntAPPRIS ALT2 TSL 2 BASIC12.93□□□□□ -0.34
SHISA3A0PJX4 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC12.93□□□□□ -0.34
SHISA3A0PJX4 AL391069.4-201ENST00000609583 481 ntBASIC12.93□□□□□ -0.34
SHISA3A0PJX4 SALL4P5-201ENST00000419001 1760 ntBASIC12.93□□□□□ -0.34
SHISA3A0PJX4 KHSRPP1-201ENST00000427983 1768 ntBASIC12.93□□□□□ -0.34
SHISA3A0PJX4 GRIN1-207ENST00000371560 3640 ntAPPRIS ALT1 TSL 1 (best) BASIC12.93□□□□□ -0.34
SHISA3A0PJX4 GTF2IRD2B-203ENST00000472837 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
SHISA3A0PJX4 NEK4-202ENST00000383721 2576 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
SHISA3A0PJX4 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
SHISA3A0PJX4 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC12.93□□□□□ -0.34
SHISA3A0PJX4 RRAGD-201ENST00000359203 4042 ntTSL 2 BASIC12.93□□□□□ -0.34
SHISA3A0PJX4 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
SHISA3A0PJX4 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
SHISA3A0PJX4 ZFP36L2-201ENST00000282388 3696 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
SHISA3A0PJX4 SLC29A4-201ENST00000297195 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
SHISA3A0PJX4 TSC22D3-204ENST00000372384 2199 ntTSL 2 BASIC12.93□□□□□ -0.34
SHISA3A0PJX4 FAM219A-207ENST00000379089 3624 ntAPPRIS ALT1 TSL 3 BASIC12.93□□□□□ -0.34
SHISA3A0PJX4 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
SHISA3A0PJX4 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
SHISA3A0PJX4 MARK4-201ENST00000262891 3573 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SHISA3A0PJX4 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
SHISA3A0PJX4 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SHISA3A0PJX4 CPT1C-202ENST00000323446 2783 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
SHISA3A0PJX4 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
SHISA3A0PJX4 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC12.92□□□□□ -0.34
SHISA3A0PJX4 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
SHISA3A0PJX4 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
SHISA3A0PJX4 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
SHISA3A0PJX4 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SHISA3A0PJX4 RPL15-213ENST00000611050 2363 ntAPPRIS P1 TSL 4 BASIC12.92□□□□□ -0.34
SHISA3A0PJX4 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
SHISA3A0PJX4 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
SHISA3A0PJX4 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
SHISA3A0PJX4 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SHISA3A0PJX4 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SHISA3A0PJX4 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
SHISA3A0PJX4 NADK-202ENST00000341991 3098 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
SHISA3A0PJX4 MORC4-202ENST00000355610 3834 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
SHISA3A0PJX4 SIRPA-202ENST00000358771 3996 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
SHISA3A0PJX4 PKIG-203ENST00000372887 769 ntTSL 3 BASIC12.92□□□□□ -0.34
SHISA3A0PJX4 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SHISA3A0PJX4 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
SHISA3A0PJX4 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC12.92□□□□□ -0.34
SHISA3A0PJX4 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SHISA3A0PJX4 RPL30-202ENST00000396070 440 ntTSL 2 BASIC12.92□□□□□ -0.34
SHISA3A0PJX4 FABP5-202ENST00000396359 986 ntTSL 5 BASIC12.92□□□□□ -0.34
SHISA3A0PJX4 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
SHISA3A0PJX4 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
SHISA3A0PJX4 CENPM-205ENST00000404067 905 ntTSL 3 BASIC12.92□□□□□ -0.34
SHISA3A0PJX4 CENPM-206ENST00000407253 818 ntTSL 2 BASIC12.92□□□□□ -0.34
SHISA3A0PJX4 NR4A2-209ENST00000426264 2642 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
SHISA3A0PJX4 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC12.92□□□□□ -0.34
SHISA3A0PJX4 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC12.92□□□□□ -0.34
SHISA3A0PJX4 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC12.92□□□□□ -0.34
SHISA3A0PJX4 RN7SL618P-201ENST00000477850 296 ntBASIC12.92□□□□□ -0.34
SHISA3A0PJX4 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC12.92□□□□□ -0.34
SHISA3A0PJX4 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC12.92□□□□□ -0.34
SHISA3A0PJX4 AC092865.5-201ENST00000545435 363 ntBASIC12.92□□□□□ -0.34
SHISA3A0PJX4 AC138761.1-201ENST00000584393 385 ntBASIC12.92□□□□□ -0.34
SHISA3A0PJX4 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC12.92□□□□□ -0.34
SHISA3A0PJX4 AC107373.2-201ENST00000607735 490 ntBASIC12.92□□□□□ -0.34
SHISA3A0PJX4 SPDYE12P-201ENST00000618416 771 ntBASIC12.92□□□□□ -0.34
SHISA3A0PJX4 AC009093.7-201ENST00000623853 1223 ntBASIC12.92□□□□□ -0.34
SHISA3A0PJX4 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC12.92□□□□□ -0.34
SHISA3A0PJX4 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC12.92□□□□□ -0.34
SHISA3A0PJX4 KIAA0930-201ENST00000251993 2723 ntTSL 2 BASIC12.92□□□□□ -0.34
SHISA3A0PJX4 GDPD5-215ENST00000533805 2424 ntTSL 2 BASIC12.92□□□□□ -0.34
SHISA3A0PJX4 SYDE1-201ENST00000342784 3264 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
SHISA3A0PJX4 FIBCD1-204ENST00000448616 3119 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
SHISA3A0PJX4 AC127496.1-201ENST00000576234 3133 ntTSL 2 BASIC12.92□□□□□ -0.34
SHISA3A0PJX4 PARP1-203ENST00000366794 3958 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SHISA3A0PJX4 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
SHISA3A0PJX4 GFPT2-201ENST00000253778 3093 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SHISA3A0PJX4 SLC4A7-211ENST00000445684 4061 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
SHISA3A0PJX4 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
SHISA3A0PJX4 CAMKV-215ENST00000488336 2905 ntTSL 2 BASIC12.92□□□□□ -0.34
SHISA3A0PJX4 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
SHISA3A0PJX4 GULP1-207ENST00000409843 2643 ntAPPRIS ALT1 TSL 2 BASIC12.92□□□□□ -0.34
SHISA3A0PJX4 AL445209.1-201ENST00000607269 3491 ntBASIC12.92□□□□□ -0.34
SHISA3A0PJX4 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC12.91□□□□□ -0.34
SHISA3A0PJX4 ZSCAN16-AS1-201ENST00000600652 2163 ntTSL 2 BASIC12.91□□□□□ -0.34
SHISA3A0PJX4 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC12.91□□□□□ -0.34
SHISA3A0PJX4 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
SHISA3A0PJX4 LDB3-207ENST00000542786 1889 ntTSL 2 BASIC12.91□□□□□ -0.34
SHISA3A0PJX4 PABPC1-208ENST00000519004 2401 ntTSL 2 BASIC12.91□□□□□ -0.34
SHISA3A0PJX4 OSBP2-219ENST00000535268 3248 ntTSL 2 BASIC12.91□□□□□ -0.34
SHISA3A0PJX4 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
SHISA3A0PJX4 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
SHISA3A0PJX4 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC12.91□□□□□ -0.34
SHISA3A0PJX4 CCND3-215ENST00000511642 2394 ntTSL 2 BASIC12.91□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms