Protein–RNA interactions for Protein: Q9Y2E6

DTX4, E3 ubiquitin-protein ligase DTX4, humanhuman

Predictions only

Length 619 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DTX4Q9Y2E6 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
DTX4Q9Y2E6 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC13.75□□□□□ -0.21
DTX4Q9Y2E6 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
DTX4Q9Y2E6 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
DTX4Q9Y2E6 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC13.75□□□□□ -0.21
DTX4Q9Y2E6 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC13.75□□□□□ -0.21
DTX4Q9Y2E6 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
DTX4Q9Y2E6 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
DTX4Q9Y2E6 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
DTX4Q9Y2E6 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
DTX4Q9Y2E6 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
DTX4Q9Y2E6 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC13.75□□□□□ -0.21
DTX4Q9Y2E6 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC13.75□□□□□ -0.21
DTX4Q9Y2E6 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC13.75□□□□□ -0.21
DTX4Q9Y2E6 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
DTX4Q9Y2E6 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC13.75□□□□□ -0.21
DTX4Q9Y2E6 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC13.74□□□□□ -0.21
DTX4Q9Y2E6 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC13.74□□□□□ -0.21
DTX4Q9Y2E6 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
DTX4Q9Y2E6 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC13.74□□□□□ -0.21
DTX4Q9Y2E6 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC13.74□□□□□ -0.21
DTX4Q9Y2E6 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
DTX4Q9Y2E6 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
DTX4Q9Y2E6 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
DTX4Q9Y2E6 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
DTX4Q9Y2E6 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC13.74□□□□□ -0.21
DTX4Q9Y2E6 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC13.74□□□□□ -0.21
DTX4Q9Y2E6 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
DTX4Q9Y2E6 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC13.74□□□□□ -0.21
DTX4Q9Y2E6 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC13.74□□□□□ -0.21
DTX4Q9Y2E6 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
DTX4Q9Y2E6 HSD17B4-206ENST00000504811 2740 ntTSL 2 BASIC13.74□□□□□ -0.21
DTX4Q9Y2E6 KATNB1-201ENST00000379661 2664 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
DTX4Q9Y2E6 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC13.74□□□□□ -0.21
DTX4Q9Y2E6 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
DTX4Q9Y2E6 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC13.74□□□□□ -0.21
DTX4Q9Y2E6 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
DTX4Q9Y2E6 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
DTX4Q9Y2E6 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
DTX4Q9Y2E6 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
DTX4Q9Y2E6 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC13.74□□□□□ -0.21
DTX4Q9Y2E6 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
DTX4Q9Y2E6 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC13.74□□□□□ -0.21
DTX4Q9Y2E6 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
DTX4Q9Y2E6 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
DTX4Q9Y2E6 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC13.74□□□□□ -0.21
DTX4Q9Y2E6 PUDPP3-201ENST00000445368 636 ntBASIC13.74□□□□□ -0.21
DTX4Q9Y2E6 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
DTX4Q9Y2E6 CDC23-208ENST00000505120 455 ntTSL 3 BASIC13.74□□□□□ -0.21
DTX4Q9Y2E6 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC13.74□□□□□ -0.21
DTX4Q9Y2E6 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC13.74□□□□□ -0.21
DTX4Q9Y2E6 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
DTX4Q9Y2E6 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC13.74□□□□□ -0.21
DTX4Q9Y2E6 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC13.74□□□□□ -0.21
DTX4Q9Y2E6 DUX4L45-201ENST00000566406 1057 ntBASIC13.74□□□□□ -0.21
DTX4Q9Y2E6 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC13.74□□□□□ -0.21
DTX4Q9Y2E6 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC13.74□□□□□ -0.21
DTX4Q9Y2E6 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC13.74□□□□□ -0.21
DTX4Q9Y2E6 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC13.74□□□□□ -0.21
DTX4Q9Y2E6 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC13.74□□□□□ -0.21
DTX4Q9Y2E6 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
DTX4Q9Y2E6 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
DTX4Q9Y2E6 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
DTX4Q9Y2E6 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
DTX4Q9Y2E6 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
DTX4Q9Y2E6 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
DTX4Q9Y2E6 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
DTX4Q9Y2E6 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC13.74□□□□□ -0.21
DTX4Q9Y2E6 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
DTX4Q9Y2E6 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
DTX4Q9Y2E6 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
DTX4Q9Y2E6 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
DTX4Q9Y2E6 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC13.74□□□□□ -0.21
DTX4Q9Y2E6 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
DTX4Q9Y2E6 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC13.74□□□□□ -0.21
DTX4Q9Y2E6 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC13.74□□□□□ -0.21
DTX4Q9Y2E6 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
DTX4Q9Y2E6 LINC01271-201ENST00000441214 2250 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
DTX4Q9Y2E6 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
DTX4Q9Y2E6 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC13.74□□□□□ -0.21
DTX4Q9Y2E6 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
DTX4Q9Y2E6 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
DTX4Q9Y2E6 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC13.73□□□□□ -0.21
DTX4Q9Y2E6 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC13.73□□□□□ -0.21
DTX4Q9Y2E6 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
DTX4Q9Y2E6 LINC00987-201ENST00000427111 2472 ntTSL 2 BASIC13.73□□□□□ -0.21
DTX4Q9Y2E6 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
DTX4Q9Y2E6 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC13.73□□□□□ -0.21
DTX4Q9Y2E6 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
DTX4Q9Y2E6 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC13.73□□□□□ -0.21
DTX4Q9Y2E6 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC13.73□□□□□ -0.21
DTX4Q9Y2E6 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
DTX4Q9Y2E6 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC13.73□□□□□ -0.21
DTX4Q9Y2E6 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
DTX4Q9Y2E6 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
DTX4Q9Y2E6 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
DTX4Q9Y2E6 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC13.73□□□□□ -0.21
DTX4Q9Y2E6 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC13.73□□□□□ -0.21
DTX4Q9Y2E6 AC015688.4-201ENST00000580780 1647 ntBASIC13.73□□□□□ -0.21
DTX4Q9Y2E6 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 52.1 ms