Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
ZC3H4Q9UPT8 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC17.72■□□□□ 0.43
ZC3H4Q9UPT8 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
ZC3H4Q9UPT8 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
ZC3H4Q9UPT8 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
ZC3H4Q9UPT8 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
ZC3H4Q9UPT8 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
ZC3H4Q9UPT8 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
ZC3H4Q9UPT8 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
ZC3H4Q9UPT8 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC17.72■□□□□ 0.43
ZC3H4Q9UPT8 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
ZC3H4Q9UPT8 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC17.72■□□□□ 0.43
ZC3H4Q9UPT8 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
ZC3H4Q9UPT8 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
ZC3H4Q9UPT8 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
ZC3H4Q9UPT8 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
ZC3H4Q9UPT8 ZCCHC13-201ENST00000339534 842 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
ZC3H4Q9UPT8 CUTA-203ENST00000374500 937 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
ZC3H4Q9UPT8 CACNG7-202ENST00000391766 631 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
ZC3H4Q9UPT8 CFAP36-203ENST00000403007 759 ntTSL 2 BASIC17.72■□□□□ 0.43
ZC3H4Q9UPT8 Metazoa_SRP.9-201ENST00000415635 283 ntBASIC17.72■□□□□ 0.43
ZC3H4Q9UPT8 AC034231.1-201ENST00000507251 537 ntTSL 4 BASIC17.72■□□□□ 0.43
ZC3H4Q9UPT8 LINC02228-201ENST00000507600 534 ntTSL 2 BASIC17.72■□□□□ 0.43
ZC3H4Q9UPT8 PAGE3-202ENST00000519203 577 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
ZC3H4Q9UPT8 AC068831.5-201ENST00000557387 328 ntBASIC17.72■□□□□ 0.43
ZC3H4Q9UPT8 MIR5001-201ENST00000580185 100 ntBASIC17.72■□□□□ 0.43
ZC3H4Q9UPT8 C19orf70-203ENST00000587589 577 ntTSL 5 BASIC17.72■□□□□ 0.43
ZC3H4Q9UPT8 MCEMP1-202ENST00000597445 763 ntAPPRIS ALT2 TSL 3 BASIC17.72■□□□□ 0.43
ZC3H4Q9UPT8 SIGLEC22P-201ENST00000599104 714 ntBASIC17.72■□□□□ 0.43
ZC3H4Q9UPT8 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
ZC3H4Q9UPT8 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
ZC3H4Q9UPT8 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
ZC3H4Q9UPT8 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
ZC3H4Q9UPT8 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
ZC3H4Q9UPT8 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC17.71■□□□□ 0.43
ZC3H4Q9UPT8 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
ZC3H4Q9UPT8 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
ZC3H4Q9UPT8 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC17.71■□□□□ 0.43
ZC3H4Q9UPT8 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC17.71■□□□□ 0.43
ZC3H4Q9UPT8 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC17.71■□□□□ 0.43
ZC3H4Q9UPT8 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC17.71■□□□□ 0.43
ZC3H4Q9UPT8 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC17.71■□□□□ 0.43
ZC3H4Q9UPT8 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC17.71■□□□□ 0.43
ZC3H4Q9UPT8 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
ZC3H4Q9UPT8 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
ZC3H4Q9UPT8 FAM227B-212ENST00000561064 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
ZC3H4Q9UPT8 PLAC9-203ENST00000372270 534 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.42
ZC3H4Q9UPT8 CELP-201ENST00000411440 1249 ntTSL 5 BASIC17.71■□□□□ 0.42
ZC3H4Q9UPT8 AL009181.1-201ENST00000418471 1085 ntTSL 5 BASIC17.71■□□□□ 0.42
ZC3H4Q9UPT8 NME6-208ENST00000435684 599 ntTSL 2 BASIC17.71■□□□□ 0.42
ZC3H4Q9UPT8 AL121845.1-201ENST00000447343 464 ntTSL 2 BASIC17.71■□□□□ 0.42
ZC3H4Q9UPT8 AC131206.1-201ENST00000538078 1211 ntBASIC17.71■□□□□ 0.42
ZC3H4Q9UPT8 AC015712.5-201ENST00000558568 564 ntTSL 2 BASIC17.71■□□□□ 0.42
ZC3H4Q9UPT8 USB1-205ENST00000561743 1135 ntTSL 3 BASIC17.71■□□□□ 0.42
ZC3H4Q9UPT8 AC018846.1-201ENST00000568231 183 ntBASIC17.71■□□□□ 0.42
ZC3H4Q9UPT8 RN7SL665P-201ENST00000578793 300 ntBASIC17.71■□□□□ 0.42
ZC3H4Q9UPT8 AC010976.2-201ENST00000609697 852 ntBASIC17.71■□□□□ 0.42
ZC3H4Q9UPT8 AC009145.4-201ENST00000625119 1294 ntBASIC17.71■□□□□ 0.42
ZC3H4Q9UPT8 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.42
ZC3H4Q9UPT8 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.42
ZC3H4Q9UPT8 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
ZC3H4Q9UPT8 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.42
ZC3H4Q9UPT8 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC17.71■□□□□ 0.42
ZC3H4Q9UPT8 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ZC3H4Q9UPT8 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ZC3H4Q9UPT8 TEKT4P2-202ENST00000559466 1312 ntBASIC17.7■□□□□ 0.42
ZC3H4Q9UPT8 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
ZC3H4Q9UPT8 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ZC3H4Q9UPT8 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
ZC3H4Q9UPT8 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ZC3H4Q9UPT8 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC17.7■□□□□ 0.42
ZC3H4Q9UPT8 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC17.7■□□□□ 0.42
ZC3H4Q9UPT8 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ZC3H4Q9UPT8 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ZC3H4Q9UPT8 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ZC3H4Q9UPT8 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC17.7■□□□□ 0.42
ZC3H4Q9UPT8 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC17.7■□□□□ 0.42
ZC3H4Q9UPT8 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
ZC3H4Q9UPT8 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ZC3H4Q9UPT8 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC17.7■□□□□ 0.42
ZC3H4Q9UPT8 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ZC3H4Q9UPT8 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ZC3H4Q9UPT8 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
ZC3H4Q9UPT8 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ZC3H4Q9UPT8 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
ZC3H4Q9UPT8 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
ZC3H4Q9UPT8 NHP2P1-201ENST00000335274 462 ntBASIC17.7■□□□□ 0.42
ZC3H4Q9UPT8 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ZC3H4Q9UPT8 GSTT2B-202ENST00000404172 819 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
ZC3H4Q9UPT8 AC098934.1-203ENST00000442868 1262 ntBASIC17.7■□□□□ 0.42
ZC3H4Q9UPT8 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
ZC3H4Q9UPT8 RPL9-203ENST00000449470 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ZC3H4Q9UPT8 RN7SL582P-201ENST00000491078 279 ntBASIC17.7■□□□□ 0.42
ZC3H4Q9UPT8 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC17.7■□□□□ 0.42
ZC3H4Q9UPT8 TGFB3-204ENST00000556285 1280 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
ZC3H4Q9UPT8 RPL13A-213ENST00000621674 1098 ntTSL 5 BASIC17.7■□□□□ 0.42
ZC3H4Q9UPT8 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
ZC3H4Q9UPT8 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC17.7■□□□□ 0.42
ZC3H4Q9UPT8 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ZC3H4Q9UPT8 AC012508.2-201ENST00000567613 1472 ntBASIC17.69■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 74.5 ms