Protein–RNA interactions for Protein: Q96SN8

CDK5RAP2, CDK5 regulatory subunit-associated protein 2, humanhuman

Predictions only

Length 1,893 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2Q96SN8 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
CDK5RAP2Q96SN8 METTL17-201ENST00000339374 1749 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
CDK5RAP2Q96SN8 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC17.05■□□□□ 0.32
CDK5RAP2Q96SN8 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CDK5RAP2Q96SN8 IGHV3-49-201ENST00000390625 439 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
CDK5RAP2Q96SN8 CHID1-202ENST00000429789 1289 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CDK5RAP2Q96SN8 AL591242.1-203ENST00000434329 374 ntTSL 3 BASIC17.05■□□□□ 0.32
CDK5RAP2Q96SN8 AC253536.4-201ENST00000440539 267 ntBASIC17.05■□□□□ 0.32
CDK5RAP2Q96SN8 AC084030.1-201ENST00000455068 561 ntTSL 4 BASIC17.05■□□□□ 0.32
CDK5RAP2Q96SN8 RN7SL8P-201ENST00000461771 266 ntBASIC17.05■□□□□ 0.32
CDK5RAP2Q96SN8 AC006435.2-201ENST00000574290 846 ntTSL 5 BASIC17.05■□□□□ 0.32
CDK5RAP2Q96SN8 AC024361.2-201ENST00000574471 898 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CDK5RAP2Q96SN8 IGFLR1-211ENST00000592889 782 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CDK5RAP2Q96SN8 AL133467.4-201ENST00000602953 725 ntBASIC17.05■□□□□ 0.32
CDK5RAP2Q96SN8 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
CDK5RAP2Q96SN8 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CDK5RAP2Q96SN8 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CDK5RAP2Q96SN8 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
CDK5RAP2Q96SN8 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CDK5RAP2Q96SN8 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CDK5RAP2Q96SN8 L2HGDH-201ENST00000261699 1377 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CDK5RAP2Q96SN8 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CDK5RAP2Q96SN8 AC232323.1-201ENST00000540724 2099 ntBASIC17.04■□□□□ 0.32
CDK5RAP2Q96SN8 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC17.04■□□□□ 0.32
CDK5RAP2Q96SN8 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
CDK5RAP2Q96SN8 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CDK5RAP2Q96SN8 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC17.04■□□□□ 0.32
CDK5RAP2Q96SN8 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC17.04■□□□□ 0.32
CDK5RAP2Q96SN8 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC17.04■□□□□ 0.32
CDK5RAP2Q96SN8 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CDK5RAP2Q96SN8 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CDK5RAP2Q96SN8 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CDK5RAP2Q96SN8 TCEA3-201ENST00000374601 1197 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CDK5RAP2Q96SN8 LY6G6E-227ENST00000409239 776 ntAPPRIS ALT2 TSL 4 BASIC17.04■□□□□ 0.32
CDK5RAP2Q96SN8 PSMA1-202ENST00000418988 1266 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CDK5RAP2Q96SN8 AC022001.2-201ENST00000607849 580 ntTSL 2 BASIC17.04■□□□□ 0.32
CDK5RAP2Q96SN8 AC092171.5-201ENST00000608012 942 ntBASIC17.04■□□□□ 0.32
CDK5RAP2Q96SN8 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC17.04■□□□□ 0.32
CDK5RAP2Q96SN8 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CDK5RAP2Q96SN8 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CDK5RAP2Q96SN8 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CDK5RAP2Q96SN8 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC17.04■□□□□ 0.32
CDK5RAP2Q96SN8 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CDK5RAP2Q96SN8 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
CDK5RAP2Q96SN8 SERPINB9P1-202ENST00000545177 1375 ntTSL 3 BASIC17.04■□□□□ 0.32
CDK5RAP2Q96SN8 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CDK5RAP2Q96SN8 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CDK5RAP2Q96SN8 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
CDK5RAP2Q96SN8 TPO-203ENST00000346956 2923 ntTSL 5 BASIC17.03■□□□□ 0.32
CDK5RAP2Q96SN8 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CDK5RAP2Q96SN8 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
CDK5RAP2Q96SN8 AL627231.1-201ENST00000394467 1125 ntBASIC17.03■□□□□ 0.32
CDK5RAP2Q96SN8 AL139125.1-201ENST00000420395 557 ntTSL 3 BASIC17.03■□□□□ 0.32
CDK5RAP2Q96SN8 NSD2-209ENST00000436793 835 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CDK5RAP2Q96SN8 UPK1A-AS1-201ENST00000443196 795 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CDK5RAP2Q96SN8 NCK1-AS1-203ENST00000474250 827 ntTSL 2 BASIC17.03■□□□□ 0.32
CDK5RAP2Q96SN8 AC091390.4-201ENST00000484974 491 ntTSL 3 BASIC17.03■□□□□ 0.32
CDK5RAP2Q96SN8 AC010285.2-201ENST00000510240 569 ntTSL 4 BASIC17.03■□□□□ 0.32
CDK5RAP2Q96SN8 AC025154.2-203ENST00000550214 1031 ntTSL 2 BASIC17.03■□□□□ 0.32
CDK5RAP2Q96SN8 AC087045.2-201ENST00000606279 1003 ntBASIC17.03■□□□□ 0.32
CDK5RAP2Q96SN8 AC073352.2-201ENST00000609385 439 ntBASIC17.03■□□□□ 0.32
CDK5RAP2Q96SN8 AC103691.2-201ENST00000618824 433 ntBASIC17.03■□□□□ 0.32
CDK5RAP2Q96SN8 DNAJC17-212ENST00000627802 428 ntTSL 4 BASIC17.03■□□□□ 0.32
CDK5RAP2Q96SN8 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CDK5RAP2Q96SN8 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
CDK5RAP2Q96SN8 DNASE1L2-204ENST00000567494 1301 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CDK5RAP2Q96SN8 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CDK5RAP2Q96SN8 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CDK5RAP2Q96SN8 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
CDK5RAP2Q96SN8 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
CDK5RAP2Q96SN8 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CDK5RAP2Q96SN8 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC17.03■□□□□ 0.32
CDK5RAP2Q96SN8 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
CDK5RAP2Q96SN8 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC17.03■□□□□ 0.32
CDK5RAP2Q96SN8 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
CDK5RAP2Q96SN8 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC17.03■□□□□ 0.32
CDK5RAP2Q96SN8 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CDK5RAP2Q96SN8 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CDK5RAP2Q96SN8 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CDK5RAP2Q96SN8 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CDK5RAP2Q96SN8 ZNF460-202ENST00000537645 2037 ntTSL 2 BASIC17.03■□□□□ 0.32
CDK5RAP2Q96SN8 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CDK5RAP2Q96SN8 AC093151.3-202ENST00000445073 709 ntTSL 3 BASIC17.03■□□□□ 0.32
CDK5RAP2Q96SN8 DCST1-AS1-201ENST00000452962 822 ntTSL 2 BASIC17.03■□□□□ 0.32
CDK5RAP2Q96SN8 AC092535.3-201ENST00000504969 468 ntTSL 3 BASIC17.03■□□□□ 0.32
CDK5RAP2Q96SN8 HMGCLL1-208ENST00000508459 884 ntTSL 2 BASIC17.03■□□□□ 0.32
CDK5RAP2Q96SN8 PTGR1-209ENST00000538962 1200 ntTSL 2 BASIC17.03■□□□□ 0.32
CDK5RAP2Q96SN8 AL132994.1-201ENST00000554098 400 ntBASIC17.03■□□□□ 0.32
CDK5RAP2Q96SN8 AC115099.1-201ENST00000570413 362 ntTSL 3 BASIC17.03■□□□□ 0.32
CDK5RAP2Q96SN8 PLIN5-202ENST00000586133 907 ntTSL 3 BASIC17.03■□□□□ 0.32
CDK5RAP2Q96SN8 SRD5A3-AS1-211ENST00000599135 737 ntTSL 5 BASIC17.03■□□□□ 0.32
CDK5RAP2Q96SN8 C15orf59-AS1-202ENST00000615095 1224 ntTSL 5 BASIC17.03■□□□□ 0.32
CDK5RAP2Q96SN8 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CDK5RAP2Q96SN8 USP39-220ENST00000613444 2161 ntTSL 2 BASIC17.03■□□□□ 0.32
CDK5RAP2Q96SN8 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CDK5RAP2Q96SN8 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC17.02■□□□□ 0.32
CDK5RAP2Q96SN8 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CDK5RAP2Q96SN8 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CDK5RAP2Q96SN8 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CDK5RAP2Q96SN8 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms