Protein–RNA interactions for Protein: P49959

MRE11, Double-strand break repair protein MRE11, humanhuman

Predictions only

Length 708 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11P49959 SIGLEC9-201ENST00000250360 1690 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
MRE11P49959 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
MRE11P49959 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
MRE11P49959 TCAM1P-207ENST00000485295 1537 ntBASIC17.42■□□□□ 0.38
MRE11P49959 UBE2D3-210ENST00000453744 3990 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
MRE11P49959 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
MRE11P49959 LRSAM1-203ENST00000373322 2849 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
MRE11P49959 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
MRE11P49959 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
MRE11P49959 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
MRE11P49959 KRT8P37-201ENST00000451609 1420 ntBASIC17.42■□□□□ 0.38
MRE11P49959 POLD4-201ENST00000312419 918 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
MRE11P49959 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
MRE11P49959 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
MRE11P49959 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
MRE11P49959 AC079776.1-201ENST00000401540 1152 ntBASIC17.42■□□□□ 0.38
MRE11P49959 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC17.42■□□□□ 0.38
MRE11P49959 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC17.42■□□□□ 0.38
MRE11P49959 FAM185BP-201ENST00000443595 716 ntBASIC17.42■□□□□ 0.38
MRE11P49959 AC097493.3-201ENST00000509725 367 ntBASIC17.42■□□□□ 0.38
MRE11P49959 TSFM-210ENST00000550559 897 ntTSL 5 BASIC17.42■□□□□ 0.38
MRE11P49959 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
MRE11P49959 AC003101.2-201ENST00000612557 442 ntBASIC17.42■□□□□ 0.38
MRE11P49959 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC17.42■□□□□ 0.38
MRE11P49959 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC17.42■□□□□ 0.38
MRE11P49959 AL645728.2-201ENST00000641974 660 ntBASIC17.42■□□□□ 0.38
MRE11P49959 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
MRE11P49959 ARID4B-201ENST00000264183 4995 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
MRE11P49959 ITGB4-203ENST00000450894 5645 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
MRE11P49959 TIGD6-201ENST00000296736 4006 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
MRE11P49959 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
MRE11P49959 DDX31-202ENST00000372153 3285 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
MRE11P49959 GIPR-205ENST00000590918 3289 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
MRE11P49959 ARMC5-201ENST00000268314 3612 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
MRE11P49959 MAN2C1-216ENST00000563622 2961 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
MRE11P49959 FAM98A-201ENST00000238823 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
MRE11P49959 ANKMY1-208ENST00000405002 3304 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
MRE11P49959 ABCG8-201ENST00000272286 2665 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
MRE11P49959 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
MRE11P49959 AC011298.1-201ENST00000407635 3398 ntTSL 2 BASIC17.42■□□□□ 0.38
MRE11P49959 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC17.42■□□□□ 0.38
MRE11P49959 REXO1L6P-201ENST00000603433 1515 ntBASIC17.42■□□□□ 0.38
MRE11P49959 SLC9B1-201ENST00000296422 1879 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
MRE11P49959 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
MRE11P49959 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
MRE11P49959 CBFA2T3-201ENST00000268679 4477 ntAPPRIS P4 TSL 1 (best) BASIC17.41■□□□□ 0.38
MRE11P49959 FIBCD1-202ENST00000372338 3253 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
MRE11P49959 SCARB2-227ENST00000640957 3255 ntAPPRIS ALT1 TSL 5 BASIC17.41■□□□□ 0.38
MRE11P49959 CETP-203ENST00000566128 1733 ntTSL 5 BASIC17.41■□□□□ 0.38
MRE11P49959 IL1RAPL2-202ENST00000372582 2985 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
MRE11P49959 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
MRE11P49959 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
MRE11P49959 REXO1L4P-201ENST00000605109 1937 ntBASIC17.41■□□□□ 0.38
MRE11P49959 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC17.41■□□□□ 0.38
MRE11P49959 TMEM201-201ENST00000340305 3851 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
MRE11P49959 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
MRE11P49959 L3MBTL1-206ENST00000427442 3157 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
MRE11P49959 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
MRE11P49959 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
MRE11P49959 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
MRE11P49959 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
MRE11P49959 ADAMTS10-201ENST00000270328 4194 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
MRE11P49959 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
MRE11P49959 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
MRE11P49959 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
MRE11P49959 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
MRE11P49959 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
MRE11P49959 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
MRE11P49959 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC17.41■□□□□ 0.38
MRE11P49959 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC17.41■□□□□ 0.38
MRE11P49959 AL592309.1-201ENST00000443127 649 ntBASIC17.41■□□□□ 0.38
MRE11P49959 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC17.41■□□□□ 0.38
MRE11P49959 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC17.41■□□□□ 0.38
MRE11P49959 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC17.41■□□□□ 0.38
MRE11P49959 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC17.41■□□□□ 0.38
MRE11P49959 AC061975.2-201ENST00000581722 295 ntBASIC17.41■□□□□ 0.38
MRE11P49959 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC17.41■□□□□ 0.38
MRE11P49959 MIR6787-201ENST00000616675 61 ntBASIC17.41■□□□□ 0.38
MRE11P49959 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC17.41■□□□□ 0.38
MRE11P49959 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
MRE11P49959 AC068075.1-201ENST00000519714 1832 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
MRE11P49959 RUFY4-201ENST00000344321 2352 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
MRE11P49959 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
MRE11P49959 MCM9-202ENST00000316316 5101 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
MRE11P49959 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
MRE11P49959 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
MRE11P49959 PVR-205ENST00000425690 3325 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
MRE11P49959 XKRX-202ENST00000468904 2249 ntTSL 2 BASIC17.41■□□□□ 0.38
MRE11P49959 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
MRE11P49959 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
MRE11P49959 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
MRE11P49959 GAP43-202ENST00000393780 1901 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
MRE11P49959 MX1-218ENST00000619682 1980 ntTSL 5 BASIC17.4■□□□□ 0.38
MRE11P49959 SCML4-203ENST00000369022 2377 ntTSL 2 BASIC17.4■□□□□ 0.38
MRE11P49959 SNCAIP-203ENST00000379538 2588 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
MRE11P49959 ABCB9-203ENST00000346530 3399 ntTSL 5 BASIC17.4■□□□□ 0.38
MRE11P49959 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
MRE11P49959 TP73-207ENST00000378290 1831 ntTSL 2 BASIC17.4■□□□□ 0.38
MRE11P49959 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
MRE11P49959 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC17.4■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 80.5 ms