Protein–RNA interactions for Protein: P46094

XCR1, Chemokine XC receptor 1, humanhuman

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XCR1P46094 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
XCR1P46094 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
XCR1P46094 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
XCR1P46094 AC023090.2-201ENST00000625182 2110 ntBASIC14.18□□□□□ -0.14
XCR1P46094 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
XCR1P46094 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
XCR1P46094 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
XCR1P46094 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC14.18□□□□□ -0.14
XCR1P46094 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC14.18□□□□□ -0.14
XCR1P46094 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
XCR1P46094 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
XCR1P46094 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
XCR1P46094 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
XCR1P46094 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
XCR1P46094 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
XCR1P46094 AC117489.1-201ENST00000625169 3217 ntBASIC14.18□□□□□ -0.14
XCR1P46094 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
XCR1P46094 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
XCR1P46094 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
XCR1P46094 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC14.18□□□□□ -0.14
XCR1P46094 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
XCR1P46094 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
XCR1P46094 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC14.18□□□□□ -0.14
XCR1P46094 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC14.18□□□□□ -0.14
XCR1P46094 MESTP3-201ENST00000503460 968 ntBASIC14.18□□□□□ -0.14
XCR1P46094 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC14.18□□□□□ -0.14
XCR1P46094 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
XCR1P46094 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC14.18□□□□□ -0.14
XCR1P46094 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
XCR1P46094 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
XCR1P46094 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC14.18□□□□□ -0.14
XCR1P46094 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC14.18□□□□□ -0.14
XCR1P46094 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
XCR1P46094 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
XCR1P46094 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
XCR1P46094 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
XCR1P46094 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
XCR1P46094 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
XCR1P46094 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
XCR1P46094 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
XCR1P46094 FES-203ENST00000394302 2133 ntTSL 5 BASIC14.18□□□□□ -0.14
XCR1P46094 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
XCR1P46094 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
XCR1P46094 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
XCR1P46094 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
XCR1P46094 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC14.18□□□□□ -0.14
XCR1P46094 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC14.18□□□□□ -0.14
XCR1P46094 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
XCR1P46094 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
XCR1P46094 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
XCR1P46094 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
XCR1P46094 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
XCR1P46094 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC14.18□□□□□ -0.14
XCR1P46094 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
XCR1P46094 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
XCR1P46094 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
XCR1P46094 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC14.17□□□□□ -0.14
XCR1P46094 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
XCR1P46094 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
XCR1P46094 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
XCR1P46094 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
XCR1P46094 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC14.17□□□□□ -0.14
XCR1P46094 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
XCR1P46094 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
XCR1P46094 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
XCR1P46094 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
XCR1P46094 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
XCR1P46094 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
XCR1P46094 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
XCR1P46094 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
XCR1P46094 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC14.17□□□□□ -0.14
XCR1P46094 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC14.17□□□□□ -0.14
XCR1P46094 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
XCR1P46094 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
XCR1P46094 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC14.17□□□□□ -0.14
XCR1P46094 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
XCR1P46094 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
XCR1P46094 COX5BP1-201ENST00000507622 393 ntBASIC14.17□□□□□ -0.14
XCR1P46094 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
XCR1P46094 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
XCR1P46094 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
XCR1P46094 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC14.17□□□□□ -0.14
XCR1P46094 HNRNPA1P48-202ENST00000565308 961 ntBASIC14.17□□□□□ -0.14
XCR1P46094 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC14.17□□□□□ -0.14
XCR1P46094 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
XCR1P46094 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC14.17□□□□□ -0.14
XCR1P46094 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC14.17□□□□□ -0.14
XCR1P46094 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
XCR1P46094 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
XCR1P46094 AC006504.5-208ENST00000588784 2401 ntBASIC14.17□□□□□ -0.14
XCR1P46094 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
XCR1P46094 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC14.17□□□□□ -0.14
XCR1P46094 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC14.17□□□□□ -0.14
XCR1P46094 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC14.17□□□□□ -0.14
XCR1P46094 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
XCR1P46094 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
XCR1P46094 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC14.17□□□□□ -0.14
XCR1P46094 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
XCR1P46094 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC14.17□□□□□ -0.14
XCR1P46094 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms