Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 MED6-201ENST00000256379 1995 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
UPK1BO75841 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
UPK1BO75841 MAGED4-201ENST00000375626 2495 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
UPK1BO75841 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
UPK1BO75841 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
UPK1BO75841 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
UPK1BO75841 EMD-201ENST00000369835 966 ntTSL 3 BASIC12.93□□□□□ -0.34
UPK1BO75841 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
UPK1BO75841 DDT-204ENST00000404092 805 ntTSL 3 BASIC12.93□□□□□ -0.34
UPK1BO75841 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC12.93□□□□□ -0.34
UPK1BO75841 FXR1-221ENST00000491674 365 ntTSL 2 BASIC12.93□□□□□ -0.34
UPK1BO75841 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC12.93□□□□□ -0.34
UPK1BO75841 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
UPK1BO75841 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC12.93□□□□□ -0.34
UPK1BO75841 ETFA-208ENST00000559602 792 ntTSL 3 BASIC12.93□□□□□ -0.34
UPK1BO75841 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC12.93□□□□□ -0.34
UPK1BO75841 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC12.93□□□□□ -0.34
UPK1BO75841 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC12.93□□□□□ -0.34
UPK1BO75841 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC12.93□□□□□ -0.34
UPK1BO75841 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
UPK1BO75841 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC12.93□□□□□ -0.34
UPK1BO75841 RAPGEF4-AS1-202ENST00000435328 4625 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
UPK1BO75841 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
UPK1BO75841 PARVB-201ENST00000338758 5429 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
UPK1BO75841 ADORA2A-AS1-201ENST00000326341 2557 ntTSL 5 BASIC12.93□□□□□ -0.34
UPK1BO75841 GIT2-201ENST00000320063 2094 ntTSL 5 BASIC12.93□□□□□ -0.34
UPK1BO75841 SLC43A3-214ENST00000529554 2207 ntAPPRIS P3 TSL 2 BASIC12.93□□□□□ -0.34
UPK1BO75841 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
UPK1BO75841 PTK7-205ENST00000352931 4023 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
UPK1BO75841 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
UPK1BO75841 AC102953.2-201ENST00000609755 3026 ntBASIC12.93□□□□□ -0.34
UPK1BO75841 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
UPK1BO75841 KCNMA1-232ENST00000638306 3811 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
UPK1BO75841 ASS1-203ENST00000372393 1548 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
UPK1BO75841 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC12.93□□□□□ -0.34
UPK1BO75841 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC12.93□□□□□ -0.34
UPK1BO75841 HOXC4-202ENST00000430889 1666 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
UPK1BO75841 ASCC3-203ENST00000369143 3433 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
UPK1BO75841 TRIB2-201ENST00000155926 4391 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
UPK1BO75841 CPT1C-204ENST00000405931 2785 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
UPK1BO75841 OCRL-201ENST00000357121 5138 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
UPK1BO75841 AL445250.1-201ENST00000641671 2259 ntBASIC12.92□□□□□ -0.34
UPK1BO75841 SLC26A6-205ENST00000395550 2589 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
UPK1BO75841 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
UPK1BO75841 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC12.92□□□□□ -0.34
UPK1BO75841 TMEM260-201ENST00000261556 4264 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
UPK1BO75841 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
UPK1BO75841 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC12.92□□□□□ -0.34
UPK1BO75841 PID1-204ENST00000409462 2387 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
UPK1BO75841 DCHS1-201ENST00000299441 10765 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
UPK1BO75841 SETD1A-201ENST00000262519 6451 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
UPK1BO75841 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
UPK1BO75841 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC12.92□□□□□ -0.34
UPK1BO75841 IGHG1-202ENST00000390548 2619 ntAPPRIS P5 BASIC12.92□□□□□ -0.34
UPK1BO75841 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
UPK1BO75841 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
UPK1BO75841 AC003958.1-201ENST00000435883 421 ntBASIC12.92□□□□□ -0.34
UPK1BO75841 TSPY20P-201ENST00000450910 630 ntBASIC12.92□□□□□ -0.34
UPK1BO75841 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
UPK1BO75841 FAM90A26-201ENST00000512047 2492 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
UPK1BO75841 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC12.92□□□□□ -0.34
UPK1BO75841 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC12.92□□□□□ -0.34
UPK1BO75841 SUOX-214ENST00000551841 906 ntTSL 3 BASIC12.92□□□□□ -0.34
UPK1BO75841 AC012615.1-201ENST00000565797 1299 ntBASIC12.92□□□□□ -0.34
UPK1BO75841 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
UPK1BO75841 IL11-204ENST00000590625 1028 ntTSL 2 BASIC12.92□□□□□ -0.34
UPK1BO75841 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC12.92□□□□□ -0.34
UPK1BO75841 AL355877.3-201ENST00000622820 899 ntBASIC12.92□□□□□ -0.34
UPK1BO75841 PCDHB17P-202ENST00000623466 3066 ntBASIC12.92□□□□□ -0.34
UPK1BO75841 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
UPK1BO75841 GRAMD1B-216ENST00000638157 3849 ntTSL 5 BASIC12.92□□□□□ -0.34
UPK1BO75841 AC107918.4-202ENST00000641623 219 ntBASIC12.92□□□□□ -0.34
UPK1BO75841 WDFY1-201ENST00000233055 4660 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
UPK1BO75841 SLC38A7-201ENST00000219320 4392 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
UPK1BO75841 LEPROTL1-201ENST00000321250 3173 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
UPK1BO75841 PAX2-202ENST00000361791 3193 ntAPPRIS ALT1 TSL 2 BASIC12.92□□□□□ -0.34
UPK1BO75841 TRIM3-203ENST00000525074 3044 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
UPK1BO75841 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
UPK1BO75841 GNAL-203ENST00000423027 2255 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
UPK1BO75841 TUBB8P7-202ENST00000564451 2115 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
UPK1BO75841 MSH6-214ENST00000616033 3429 ntTSL 5 BASIC12.92□□□□□ -0.34
UPK1BO75841 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
UPK1BO75841 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC12.92□□□□□ -0.34
UPK1BO75841 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC12.92□□□□□ -0.34
UPK1BO75841 TCAF2-201ENST00000357344 2958 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
UPK1BO75841 LINC02015-202ENST00000436078 2957 ntTSL 2 BASIC12.92□□□□□ -0.34
UPK1BO75841 PTK2-202ENST00000395218 4415 ntTSL 5 BASIC12.92□□□□□ -0.34
UPK1BO75841 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
UPK1BO75841 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
UPK1BO75841 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC12.92□□□□□ -0.34
UPK1BO75841 INCENP-202ENST00000394818 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
UPK1BO75841 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC12.92□□□□□ -0.34
UPK1BO75841 LPO-204ENST00000543544 2350 ntTSL 2 BASIC12.92□□□□□ -0.34
UPK1BO75841 CNTD1-204ENST00000588408 2369 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
UPK1BO75841 ANKRD30B-202ENST00000358984 4359 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
UPK1BO75841 AC009501.1-201ENST00000429952 2069 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
UPK1BO75841 PRPF40B-209ENST00000548825 3307 ntAPPRIS P2 TSL 5 BASIC12.91□□□□□ -0.34
UPK1BO75841 KIF3A-208ENST00000618515 3333 ntTSL 5 BASIC12.91□□□□□ -0.34
UPK1BO75841 NXF1-201ENST00000294172 2346 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
UPK1BO75841 SPPL2A-201ENST00000261854 7372 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 112 ms