Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
USH2AO75445 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC6.4□□□□□ -1.38
USH2AO75445 ODCP-201ENST00000459650 1639 ntBASIC6.4□□□□□ -1.38
USH2AO75445 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC6.4□□□□□ -1.38
USH2AO75445 ARPC1A-201ENST00000262942 1565 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
USH2AO75445 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
USH2AO75445 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC6.4□□□□□ -1.38
USH2AO75445 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC6.4□□□□□ -1.38
USH2AO75445 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
USH2AO75445 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC6.4□□□□□ -1.38
USH2AO75445 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
USH2AO75445 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC6.4□□□□□ -1.38
USH2AO75445 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
USH2AO75445 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
USH2AO75445 SUGT1-202ENST00000343788 1217 ntAPPRIS ALT2 TSL 1 (best) BASIC6.4□□□□□ -1.38
USH2AO75445 GALP-201ENST00000357330 938 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
USH2AO75445 KRTAP1-5-201ENST00000361883 1177 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
USH2AO75445 PDE4DIP-202ENST00000369347 1137 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
USH2AO75445 WDR54-202ENST00000409791 854 ntTSL 3 BASIC6.4□□□□□ -1.38
USH2AO75445 GALP-202ENST00000440823 889 ntTSL 5 BASIC6.4□□□□□ -1.38
USH2AO75445 HNRNPA1P10-201ENST00000444945 962 ntBASIC6.4□□□□□ -1.38
USH2AO75445 AC116025.1-201ENST00000575404 415 ntTSL 3 BASIC6.4□□□□□ -1.38
USH2AO75445 AC015818.3-201ENST00000583797 589 ntBASIC6.4□□□□□ -1.38
USH2AO75445 AC010319.4-201ENST00000593957 691 ntTSL 3 BASIC6.4□□□□□ -1.38
USH2AO75445 AP000356.3-203ENST00000614808 601 ntTSL 3 BASIC6.4□□□□□ -1.38
USH2AO75445 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC6.4□□□□□ -1.38
USH2AO75445 CICP23-201ENST00000605013 2741 ntBASIC6.4□□□□□ -1.38
USH2AO75445 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
USH2AO75445 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC6.4□□□□□ -1.38
USH2AO75445 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.38
USH2AO75445 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
USH2AO75445 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC6.4□□□□□ -1.38
USH2AO75445 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC6.4□□□□□ -1.39
USH2AO75445 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC6.4□□□□□ -1.39
USH2AO75445 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC6.4□□□□□ -1.39
USH2AO75445 TRPM3-205ENST00000361823 1260 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
USH2AO75445 RAI1-AS1-201ENST00000443696 724 ntTSL 5 BASIC6.4□□□□□ -1.39
USH2AO75445 BATF-202ENST00000555504 361 ntTSL 2 BASIC6.4□□□□□ -1.39
USH2AO75445 MCM8-AS1-201ENST00000613522 983 ntTSL 2 BASIC6.4□□□□□ -1.39
USH2AO75445 HPX-213ENST00000615166 826 ntTSL 5 BASIC6.4□□□□□ -1.39
USH2AO75445 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC6.4□□□□□ -1.39
USH2AO75445 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
USH2AO75445 ZNRF4-201ENST00000222033 1426 ntAPPRIS P1 BASIC6.4□□□□□ -1.39
USH2AO75445 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
USH2AO75445 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC6.4□□□□□ -1.39
USH2AO75445 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC6.4□□□□□ -1.39
USH2AO75445 ZCCHC17-201ENST00000344147 1605 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
USH2AO75445 ZNF174-201ENST00000268655 2260 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
USH2AO75445 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC6.4□□□□□ -1.39
USH2AO75445 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
USH2AO75445 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC6.4□□□□□ -1.39
USH2AO75445 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC6.4□□□□□ -1.39
USH2AO75445 SAT1-201ENST00000379251 801 ntTSL 2 BASIC6.4□□□□□ -1.39
USH2AO75445 SAT1-202ENST00000379253 909 ntTSL 2 BASIC6.4□□□□□ -1.39
USH2AO75445 SAT1-203ENST00000379254 868 ntTSL 3 BASIC6.4□□□□□ -1.39
USH2AO75445 SAT1-204ENST00000379270 1065 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
USH2AO75445 ID2-AS1-201ENST00000412712 953 ntTSL 5 BASIC6.4□□□□□ -1.39
USH2AO75445 LRRC3-AS1-201ENST00000426578 784 ntTSL 3 BASIC6.4□□□□□ -1.39
USH2AO75445 ALMS1P1-201ENST00000428767 921 ntBASIC6.4□□□□□ -1.39
USH2AO75445 AC006001.2-202ENST00000439360 508 ntTSL 3 BASIC6.4□□□□□ -1.39
USH2AO75445 AL110503.1-201ENST00000457224 534 ntTSL 3 BASIC6.4□□□□□ -1.39
USH2AO75445 TCL1A-209ENST00000557043 980 ntTSL 3 BASIC6.4□□□□□ -1.39
USH2AO75445 AL353708.1-201ENST00000567904 1257 ntBASIC6.4□□□□□ -1.39
USH2AO75445 AC005323.2-202ENST00000581304 493 ntTSL 3 BASIC6.4□□□□□ -1.39
USH2AO75445 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC6.39□□□□□ -1.39
USH2AO75445 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
USH2AO75445 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
USH2AO75445 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
USH2AO75445 HNRNPC-205ENST00000553300 1375 ntAPPRIS P2 TSL 1 (best) BASIC6.39□□□□□ -1.39
USH2AO75445 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
USH2AO75445 APTX-211ENST00000463596 1345 ntAPPRIS ALT2 TSL 1 (best) BASIC6.39□□□□□ -1.39
USH2AO75445 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
USH2AO75445 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
USH2AO75445 GNRH2-204ENST00000380347 758 ntAPPRIS ALT2 TSL 5 BASIC6.39□□□□□ -1.39
USH2AO75445 IGF2-201ENST00000381389 1023 ntAPPRIS P2 TSL 1 (best) BASIC6.39□□□□□ -1.39
USH2AO75445 KRTAP10-12-201ENST00000400365 873 ntAPPRIS P2 BASIC6.39□□□□□ -1.39
USH2AO75445 PSAT1P2-201ENST00000426107 972 ntBASIC6.39□□□□□ -1.39
USH2AO75445 ACP1-207ENST00000439645 605 ntTSL 2 BASIC6.39□□□□□ -1.39
USH2AO75445 KRT18P62-201ENST00000446618 1287 ntBASIC6.39□□□□□ -1.39
USH2AO75445 AC009517.1-201ENST00000454750 570 ntBASIC6.39□□□□□ -1.39
USH2AO75445 LAMTOR4-209ENST00000488241 613 ntTSL 2 BASIC6.39□□□□□ -1.39
USH2AO75445 TROAP-213ENST00000550709 778 ntAPPRIS ALT2 TSL 2 BASIC6.39□□□□□ -1.39
USH2AO75445 PFDN5-220ENST00000628881 231 ntTSL 3 BASIC6.39□□□□□ -1.39
USH2AO75445 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
USH2AO75445 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC6.39□□□□□ -1.39
USH2AO75445 CRYM-202ENST00000543948 1400 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
USH2AO75445 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC6.39□□□□□ -1.39
USH2AO75445 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC6.39□□□□□ -1.39
USH2AO75445 MRPS10-201ENST00000053468 2110 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
USH2AO75445 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC6.39□□□□□ -1.39
USH2AO75445 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
USH2AO75445 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
USH2AO75445 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC6.39□□□□□ -1.39
USH2AO75445 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
USH2AO75445 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC6.39□□□□□ -1.39
USH2AO75445 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
USH2AO75445 FUNDC1-201ENST00000378045 1196 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
USH2AO75445 AC245128.1-201ENST00000400864 1294 ntTSL 5 BASIC6.39□□□□□ -1.39
USH2AO75445 KCNMA1-AS1-201ENST00000426234 863 ntTSL 5 BASIC6.39□□□□□ -1.39
USH2AO75445 AC099328.1-201ENST00000498809 1030 ntBASIC6.39□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms