Protein–RNA interactions for Protein: A2PYH4

HFM1, Probable ATP-dependent DNA helicase HFM1, humanhuman

Predictions only

Length 1,435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HFM1A2PYH4 PGPEP1-206ENST00000597431 545 ntTSL 5 BASIC21.55■■□□□ 1.04
HFM1A2PYH4 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
HFM1A2PYH4 AC138761.4-201ENST00000578881 1514 ntTSL 3 BASIC21.54■■□□□ 1.04
HFM1A2PYH4 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC21.54■■□□□ 1.04
HFM1A2PYH4 LGALS12-202ENST00000340246 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
HFM1A2PYH4 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC21.54■■□□□ 1.04
HFM1A2PYH4 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
HFM1A2PYH4 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
HFM1A2PYH4 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
HFM1A2PYH4 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
HFM1A2PYH4 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC21.54■■□□□ 1.04
HFM1A2PYH4 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
HFM1A2PYH4 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
HFM1A2PYH4 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
HFM1A2PYH4 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
HFM1A2PYH4 GMEB1-202ENST00000361872 1894 ntAPPRIS ALT1 TSL 1 (best) BASIC21.54■■□□□ 1.04
HFM1A2PYH4 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC21.54■■□□□ 1.04
HFM1A2PYH4 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
HFM1A2PYH4 TCEAL6-201ENST00000372773 983 ntAPPRIS P1 TSL 3 BASIC21.54■■□□□ 1.04
HFM1A2PYH4 OR2K2-202ENST00000374428 1038 ntBASIC21.54■■□□□ 1.04
HFM1A2PYH4 IGHV4-39-201ENST00000390619 425 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
HFM1A2PYH4 CAMKMT-203ENST00000403853 1114 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
HFM1A2PYH4 LINC01388-201ENST00000416242 416 ntTSL 3 BASIC21.54■■□□□ 1.04
HFM1A2PYH4 RPS9P1-201ENST00000419943 583 ntBASIC21.54■■□□□ 1.04
HFM1A2PYH4 Z97180.1-201ENST00000445173 988 ntBASIC21.54■■□□□ 1.04
HFM1A2PYH4 RHEB-207ENST00000496004 744 ntTSL 2 BASIC21.54■■□□□ 1.04
HFM1A2PYH4 CD164-210ENST00000512821 964 ntTSL 2 BASIC21.54■■□□□ 1.04
HFM1A2PYH4 PCMTD1-207ENST00000522514 1287 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
HFM1A2PYH4 NDUFC2-204ENST00000528164 561 ntTSL 2 BASIC21.54■■□□□ 1.04
HFM1A2PYH4 UBE3B-206ENST00000536398 1120 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
HFM1A2PYH4 SNHG21-204ENST00000559366 674 ntTSL 2 BASIC21.54■■□□□ 1.04
HFM1A2PYH4 AC099684.2-201ENST00000574520 870 ntTSL 5 BASIC21.54■■□□□ 1.04
HFM1A2PYH4 LINC00923-205ENST00000615399 932 ntTSL 5 BASIC21.54■■□□□ 1.04
HFM1A2PYH4 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
HFM1A2PYH4 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC21.54■■□□□ 1.04
HFM1A2PYH4 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC21.53■■□□□ 1.04
HFM1A2PYH4 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
HFM1A2PYH4 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
HFM1A2PYH4 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
HFM1A2PYH4 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
HFM1A2PYH4 TOMM22-201ENST00000216034 2040 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
HFM1A2PYH4 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
HFM1A2PYH4 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
HFM1A2PYH4 CD59-201ENST00000351554 1775 ntAPPRIS P2 TSL 2 BASIC21.53■■□□□ 1.04
HFM1A2PYH4 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC21.53■■□□□ 1.04
HFM1A2PYH4 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC21.53■■□□□ 1.04
HFM1A2PYH4 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
HFM1A2PYH4 HFE-201ENST00000309234 1158 ntAPPRIS ALT2 TSL 2 BASIC21.53■■□□□ 1.04
HFM1A2PYH4 FMR1NB-201ENST00000370467 1021 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
HFM1A2PYH4 LCMT1-202ENST00000380966 989 ntTSL 2 BASIC21.53■■□□□ 1.04
HFM1A2PYH4 AL391832.2-201ENST00000418557 889 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
HFM1A2PYH4 AL133466.1-201ENST00000447582 150 ntBASIC21.53■■□□□ 1.04
HFM1A2PYH4 TMEM198B-204ENST00000484016 896 ntBASIC21.53■■□□□ 1.04
HFM1A2PYH4 AC008438.1-201ENST00000507521 549 ntTSL 2 BASIC21.53■■□□□ 1.04
HFM1A2PYH4 HMGCLL1-208ENST00000508459 884 ntTSL 2 BASIC21.53■■□□□ 1.04
HFM1A2PYH4 AC134698.3-201ENST00000523880 214 ntBASIC21.53■■□□□ 1.04
HFM1A2PYH4 EEF1D-218ENST00000526838 926 ntAPPRIS ALT2 TSL 2 BASIC21.53■■□□□ 1.04
HFM1A2PYH4 MIR4722-201ENST00000578292 60 ntBASIC21.53■■□□□ 1.04
HFM1A2PYH4 LGALS9C-215ENST00000584941 1104 ntTSL 5 BASIC21.53■■□□□ 1.04
HFM1A2PYH4 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC21.53■■□□□ 1.04
HFM1A2PYH4 ACTR2-205ENST00000542850 1429 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
HFM1A2PYH4 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC21.53■■□□□ 1.04
HFM1A2PYH4 APOF-201ENST00000398189 1715 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
HFM1A2PYH4 GMPR2-204ENST00000420554 1864 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
HFM1A2PYH4 GMPR2-223ENST00000559836 1893 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
HFM1A2PYH4 PRIMPOL-211ENST00000515774 2007 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
HFM1A2PYH4 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
HFM1A2PYH4 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
HFM1A2PYH4 CRYL1-201ENST00000298248 1485 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
HFM1A2PYH4 AC082651.3-201ENST00000474667 1947 ntTSL 2 BASIC21.52■■□□□ 1.04
HFM1A2PYH4 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC21.52■■□□□ 1.04
HFM1A2PYH4 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
HFM1A2PYH4 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC21.52■■□□□ 1.04
HFM1A2PYH4 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
HFM1A2PYH4 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
HFM1A2PYH4 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
HFM1A2PYH4 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
HFM1A2PYH4 ZSCAN5A-206ENST00000587492 1542 ntTSL 2 BASIC21.52■■□□□ 1.04
HFM1A2PYH4 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
HFM1A2PYH4 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
HFM1A2PYH4 GAD1-203ENST00000375272 1252 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
HFM1A2PYH4 ESD-202ENST00000378720 1192 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
HFM1A2PYH4 MIR557-201ENST00000385239 98 ntBASIC21.52■■□□□ 1.04
HFM1A2PYH4 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
HFM1A2PYH4 RAB1A-201ENST00000398529 1198 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
HFM1A2PYH4 AL451042.2-201ENST00000424774 904 ntTSL 2 BASIC21.52■■□□□ 1.04
HFM1A2PYH4 RLN3-201ENST00000431365 580 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
HFM1A2PYH4 PRKRA-211ENST00000487082 1211 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
HFM1A2PYH4 NDUFC1-209ENST00000539002 1198 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
HFM1A2PYH4 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC21.52■■□□□ 1.04
HFM1A2PYH4 NDUFC1-211ENST00000544855 1257 ntAPPRIS P1 TSL 3 BASIC21.52■■□□□ 1.04
HFM1A2PYH4 LINC02440-201ENST00000545276 680 ntTSL 2 BASIC21.52■■□□□ 1.04
HFM1A2PYH4 PPCDC-205ENST00000563393 1149 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
HFM1A2PYH4 PPCDC-208ENST00000567336 892 ntTSL 5 BASIC21.52■■□□□ 1.04
HFM1A2PYH4 AC006453.1-201ENST00000636037 1257 ntBASIC21.52■■□□□ 1.04
HFM1A2PYH4 GABRB2-205ENST00000517901 1779 ntTSL 5 BASIC21.52■■□□□ 1.04
HFM1A2PYH4 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
HFM1A2PYH4 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
HFM1A2PYH4 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC21.52■■□□□ 1.03
HFM1A2PYH4 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms