Protein–RNA interactions for Protein: Q9BYV2

TRIM54, Tripartite motif-containing protein 54, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54Q9BYV2 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRIM54Q9BYV2 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRIM54Q9BYV2 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC14.73□□□□□ -0.05
TRIM54Q9BYV2 AC027601.5-201ENST00000624065 2482 ntBASIC14.73□□□□□ -0.05
TRIM54Q9BYV2 AC015656.1-201ENST00000624209 3578 ntBASIC14.73□□□□□ -0.05
TRIM54Q9BYV2 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
TRIM54Q9BYV2 DCHS1-201ENST00000299441 10765 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRIM54Q9BYV2 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRIM54Q9BYV2 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRIM54Q9BYV2 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
TRIM54Q9BYV2 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
TRIM54Q9BYV2 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC14.73□□□□□ -0.05
TRIM54Q9BYV2 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRIM54Q9BYV2 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRIM54Q9BYV2 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRIM54Q9BYV2 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
TRIM54Q9BYV2 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC14.73□□□□□ -0.05
TRIM54Q9BYV2 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRIM54Q9BYV2 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC14.73□□□□□ -0.05
TRIM54Q9BYV2 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC14.73□□□□□ -0.05
TRIM54Q9BYV2 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
TRIM54Q9BYV2 AC022137.2-201ENST00000503482 481 ntBASIC14.73□□□□□ -0.05
TRIM54Q9BYV2 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC14.73□□□□□ -0.05
TRIM54Q9BYV2 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC14.73□□□□□ -0.05
TRIM54Q9BYV2 PTP4A1P2-201ENST00000546033 454 ntBASIC14.73□□□□□ -0.05
TRIM54Q9BYV2 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC14.73□□□□□ -0.05
TRIM54Q9BYV2 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC14.73□□□□□ -0.05
TRIM54Q9BYV2 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRIM54Q9BYV2 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
TRIM54Q9BYV2 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
TRIM54Q9BYV2 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC14.73□□□□□ -0.05
TRIM54Q9BYV2 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
TRIM54Q9BYV2 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
TRIM54Q9BYV2 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC14.73□□□□□ -0.05
TRIM54Q9BYV2 CAND2-201ENST00000295989 4429 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
TRIM54Q9BYV2 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
TRIM54Q9BYV2 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRIM54Q9BYV2 STRC-205ENST00000450892 5680 ntAPPRIS P2 TSL 5 BASIC14.73□□□□□ -0.05
TRIM54Q9BYV2 KDM6B-201ENST00000254846 6713 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRIM54Q9BYV2 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRIM54Q9BYV2 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
TRIM54Q9BYV2 TMEM87B-201ENST00000283206 5212 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
TRIM54Q9BYV2 AC005840.4-201ENST00000541242 2494 ntBASIC14.73□□□□□ -0.05
TRIM54Q9BYV2 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRIM54Q9BYV2 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
TRIM54Q9BYV2 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRIM54Q9BYV2 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC14.73□□□□□ -0.05
TRIM54Q9BYV2 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
TRIM54Q9BYV2 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRIM54Q9BYV2 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC14.73□□□□□ -0.05
TRIM54Q9BYV2 LANCL3-202ENST00000378621 10298 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
TRIM54Q9BYV2 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
TRIM54Q9BYV2 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC14.73□□□□□ -0.05
TRIM54Q9BYV2 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC14.73□□□□□ -0.05
TRIM54Q9BYV2 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRIM54Q9BYV2 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC14.73□□□□□ -0.05
TRIM54Q9BYV2 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TRIM54Q9BYV2 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
TRIM54Q9BYV2 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC14.72□□□□□ -0.05
TRIM54Q9BYV2 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
TRIM54Q9BYV2 AFF3-202ENST00000409236 9849 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
TRIM54Q9BYV2 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
TRIM54Q9BYV2 ARAP3-201ENST00000239440 5250 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TRIM54Q9BYV2 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TRIM54Q9BYV2 SPIN3-204ENST00000638257 4835 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
TRIM54Q9BYV2 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC14.72□□□□□ -0.05
TRIM54Q9BYV2 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC14.72□□□□□ -0.05
TRIM54Q9BYV2 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TRIM54Q9BYV2 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TRIM54Q9BYV2 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
TRIM54Q9BYV2 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
TRIM54Q9BYV2 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TRIM54Q9BYV2 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TRIM54Q9BYV2 ACTG1P3-201ENST00000431775 1114 ntBASIC14.72□□□□□ -0.05
TRIM54Q9BYV2 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC14.72□□□□□ -0.05
TRIM54Q9BYV2 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
TRIM54Q9BYV2 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC14.72□□□□□ -0.05
TRIM54Q9BYV2 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
TRIM54Q9BYV2 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
TRIM54Q9BYV2 WASH4P-201ENST00000564273 1246 ntBASIC14.72□□□□□ -0.05
TRIM54Q9BYV2 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC14.72□□□□□ -0.05
TRIM54Q9BYV2 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC14.72□□□□□ -0.05
TRIM54Q9BYV2 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
TRIM54Q9BYV2 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
TRIM54Q9BYV2 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
TRIM54Q9BYV2 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
TRIM54Q9BYV2 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC14.72□□□□□ -0.05
TRIM54Q9BYV2 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TRIM54Q9BYV2 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TRIM54Q9BYV2 USE1-206ENST00000595101 1776 ntTSL 2 BASIC14.72□□□□□ -0.05
TRIM54Q9BYV2 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC14.72□□□□□ -0.05
TRIM54Q9BYV2 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TRIM54Q9BYV2 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
TRIM54Q9BYV2 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC14.72□□□□□ -0.05
TRIM54Q9BYV2 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC14.72□□□□□ -0.05
TRIM54Q9BYV2 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC14.72□□□□□ -0.05
TRIM54Q9BYV2 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
TRIM54Q9BYV2 WASHC2C-201ENST00000336378 4669 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
TRIM54Q9BYV2 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TRIM54Q9BYV2 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 109.3 ms