Protein–RNA interactions for Protein: Q93084

ATP2A3, Sarcoplasmic/endoplasmic reticulum calcium ATPase 3, humanhuman

Predictions only

Length 1,043 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3Q93084 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC15.74■□□□□ 0.11
ATP2A3Q93084 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC15.74■□□□□ 0.11
ATP2A3Q93084 SAMD11P1-201ENST00000571429 661 ntBASIC15.74■□□□□ 0.11
ATP2A3Q93084 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC15.74■□□□□ 0.11
ATP2A3Q93084 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
ATP2A3Q93084 AL008638.5-201ENST00000623814 1298 ntBASIC15.74■□□□□ 0.11
ATP2A3Q93084 AL139099.5-201ENST00000635274 300 ntBASIC15.74■□□□□ 0.11
ATP2A3Q93084 AL603764.1-201ENST00000636452 321 ntBASIC15.74■□□□□ 0.11
ATP2A3Q93084 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
ATP2A3Q93084 TET2-207ENST00000513237 10166 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
ATP2A3Q93084 TET2-209ENST00000540549 10166 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
ATP2A3Q93084 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC15.74■□□□□ 0.11
ATP2A3Q93084 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC15.74■□□□□ 0.11
ATP2A3Q93084 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
ATP2A3Q93084 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
ATP2A3Q93084 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
ATP2A3Q93084 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
ATP2A3Q93084 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
ATP2A3Q93084 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
ATP2A3Q93084 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
ATP2A3Q93084 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC15.74■□□□□ 0.11
ATP2A3Q93084 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
ATP2A3Q93084 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
ATP2A3Q93084 RAPGEF1-202ENST00000372190 6045 ntAPPRIS P4 TSL 1 (best) BASIC15.74■□□□□ 0.11
ATP2A3Q93084 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
ATP2A3Q93084 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
ATP2A3Q93084 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
ATP2A3Q93084 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
ATP2A3Q93084 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
ATP2A3Q93084 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
ATP2A3Q93084 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
ATP2A3Q93084 GRN-222ENST00000639447 1314 ntTSL 2 BASIC15.73■□□□□ 0.11
ATP2A3Q93084 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC15.73■□□□□ 0.11
ATP2A3Q93084 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
ATP2A3Q93084 NFIC-206ENST00000589123 8068 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
ATP2A3Q93084 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
ATP2A3Q93084 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
ATP2A3Q93084 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
ATP2A3Q93084 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
ATP2A3Q93084 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
ATP2A3Q93084 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
ATP2A3Q93084 SNX21-203ENST00000372541 771 ntTSL 2 BASIC15.73■□□□□ 0.11
ATP2A3Q93084 OARD1-212ENST00000482515 832 ntTSL 2 BASIC15.73■□□□□ 0.11
ATP2A3Q93084 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
ATP2A3Q93084 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC15.73■□□□□ 0.11
ATP2A3Q93084 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC15.73■□□□□ 0.11
ATP2A3Q93084 AC022616.1-201ENST00000518688 554 ntBASIC15.73■□□□□ 0.11
ATP2A3Q93084 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC15.73■□□□□ 0.11
ATP2A3Q93084 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
ATP2A3Q93084 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC15.73■□□□□ 0.11
ATP2A3Q93084 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC15.73■□□□□ 0.11
ATP2A3Q93084 CYGB-203ENST00000589145 788 ntTSL 3 BASIC15.73■□□□□ 0.11
ATP2A3Q93084 AC005695.3-201ENST00000614522 232 ntBASIC15.73■□□□□ 0.11
ATP2A3Q93084 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC15.73■□□□□ 0.11
ATP2A3Q93084 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
ATP2A3Q93084 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
ATP2A3Q93084 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
ATP2A3Q93084 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC15.73■□□□□ 0.11
ATP2A3Q93084 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
ATP2A3Q93084 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC15.73■□□□□ 0.11
ATP2A3Q93084 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
ATP2A3Q93084 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
ATP2A3Q93084 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
ATP2A3Q93084 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC15.72■□□□□ 0.11
ATP2A3Q93084 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
ATP2A3Q93084 CICP11-201ENST00000434745 2827 ntBASIC15.72■□□□□ 0.11
ATP2A3Q93084 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
ATP2A3Q93084 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
ATP2A3Q93084 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC15.72■□□□□ 0.11
ATP2A3Q93084 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC15.72■□□□□ 0.11
ATP2A3Q93084 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC15.72■□□□□ 0.11
ATP2A3Q93084 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
ATP2A3Q93084 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
ATP2A3Q93084 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
ATP2A3Q93084 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
ATP2A3Q93084 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
ATP2A3Q93084 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
ATP2A3Q93084 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
ATP2A3Q93084 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC15.72■□□□□ 0.11
ATP2A3Q93084 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
ATP2A3Q93084 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
ATP2A3Q93084 LSM5-207ENST00000410044 687 ntTSL 3 BASIC15.72■□□□□ 0.11
ATP2A3Q93084 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC15.72■□□□□ 0.11
ATP2A3Q93084 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
ATP2A3Q93084 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC15.72■□□□□ 0.11
ATP2A3Q93084 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
ATP2A3Q93084 FAM8A4P-201ENST00000435433 1213 ntBASIC15.72■□□□□ 0.11
ATP2A3Q93084 AC245100.3-201ENST00000441281 285 ntBASIC15.72■□□□□ 0.11
ATP2A3Q93084 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
ATP2A3Q93084 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
ATP2A3Q93084 ARTN-209ENST00000479128 471 ntTSL 3 BASIC15.72■□□□□ 0.11
ATP2A3Q93084 RPSAP36-202ENST00000494591 1261 ntBASIC15.72■□□□□ 0.11
ATP2A3Q93084 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC15.72■□□□□ 0.11
ATP2A3Q93084 ZNF767P-206ENST00000513792 565 ntBASIC15.72■□□□□ 0.11
ATP2A3Q93084 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
ATP2A3Q93084 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
ATP2A3Q93084 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
ATP2A3Q93084 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
ATP2A3Q93084 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
ATP2A3Q93084 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 85.1 ms