Protein–RNA interactions for Protein: Q86VP3

PACS2, Phosphofurin acidic cluster sorting protein 2, humanhuman

Predictions only

Length 889 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PACS2Q86VP3 INO80E-210ENST00000567705 880 ntTSL 3 BASIC15.12■□□□□ 0.01
PACS2Q86VP3 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PACS2Q86VP3 PATL2-201ENST00000434130 1950 ntAPPRIS P3 TSL 5 BASIC15.12■□□□□ 0.01
PACS2Q86VP3 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
PACS2Q86VP3 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC15.12■□□□□ 0.01
PACS2Q86VP3 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
PACS2Q86VP3 ZNF202-207ENST00000530393 3564 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PACS2Q86VP3 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PACS2Q86VP3 AP1B1-208ENST00000432560 4146 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
PACS2Q86VP3 RMDN1-201ENST00000406452 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PACS2Q86VP3 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
PACS2Q86VP3 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
PACS2Q86VP3 KRT18P28-201ENST00000453838 1332 ntBASIC15.12■□□□□ 0.01
PACS2Q86VP3 XIRP1-203ENST00000421646 2596 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
PACS2Q86VP3 NINL-203ENST00000422516 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
PACS2Q86VP3 SMOC2-202ENST00000356284 3117 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PACS2Q86VP3 TBR1-201ENST00000389554 4009 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PACS2Q86VP3 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC15.12■□□□□ 0.01
PACS2Q86VP3 SUPT20HL1-201ENST00000436466 2618 ntBASIC15.12■□□□□ 0.01
PACS2Q86VP3 SUPV3L1-201ENST00000359655 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PACS2Q86VP3 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
PACS2Q86VP3 CLOCK-211ENST00000513440 3580 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PACS2Q86VP3 FLAD1-207ENST00000368433 2656 ntTSL 2 BASIC15.11■□□□□ 0.01
PACS2Q86VP3 FAM122C-203ENST00000414371 2119 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
PACS2Q86VP3 ADAM11-201ENST00000200557 4571 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PACS2Q86VP3 SECISBP2-202ENST00000375807 3462 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PACS2Q86VP3 H3F3B-201ENST00000254810 2705 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PACS2Q86VP3 ABAT-213ENST00000567812 1959 ntTSL 2 BASIC15.11■□□□□ 0.01
PACS2Q86VP3 CCER1-201ENST00000358859 2962 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
PACS2Q86VP3 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PACS2Q86VP3 SNCA-204ENST00000394989 3167 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
PACS2Q86VP3 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PACS2Q86VP3 AC102953.2-201ENST00000609755 3026 ntBASIC15.11■□□□□ 0.01
PACS2Q86VP3 BCL2-201ENST00000333681 3209 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PACS2Q86VP3 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
PACS2Q86VP3 COL16A1-202ENST00000373668 3643 ntTSL 2 BASIC15.11■□□□□ 0.01
PACS2Q86VP3 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PACS2Q86VP3 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PACS2Q86VP3 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PACS2Q86VP3 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC15.11■□□□□ 0.01
PACS2Q86VP3 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC15.11■□□□□ 0.01
PACS2Q86VP3 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC15.11■□□□□ 0.01
PACS2Q86VP3 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
PACS2Q86VP3 AL627223.1-201ENST00000416693 442 ntBASIC15.11■□□□□ 0.01
PACS2Q86VP3 KRT18P32-201ENST00000424695 1287 ntBASIC15.11■□□□□ 0.01
PACS2Q86VP3 SPCS2P4-201ENST00000436160 681 ntBASIC15.11■□□□□ 0.01
PACS2Q86VP3 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
PACS2Q86VP3 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC15.11■□□□□ 0.01
PACS2Q86VP3 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC15.11■□□□□ 0.01
PACS2Q86VP3 SETP12-201ENST00000514068 805 ntBASIC15.11■□□□□ 0.01
PACS2Q86VP3 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC15.11■□□□□ 0.01
PACS2Q86VP3 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC15.11■□□□□ 0.01
PACS2Q86VP3 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC15.11■□□□□ 0.01
PACS2Q86VP3 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
PACS2Q86VP3 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PACS2Q86VP3 AC027307.2-201ENST00000591252 911 ntBASIC15.11■□□□□ 0.01
PACS2Q86VP3 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC15.11■□□□□ 0.01
PACS2Q86VP3 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC15.11■□□□□ 0.01
PACS2Q86VP3 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC15.11■□□□□ 0.01
PACS2Q86VP3 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
PACS2Q86VP3 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
PACS2Q86VP3 GGA3-214ENST00000582717 2255 ntTSL 2 BASIC15.11■□□□□ 0.01
PACS2Q86VP3 NRXN1-259ENST00000637511 3651 ntTSL 5 BASIC15.11■□□□□ 0.01
PACS2Q86VP3 AL031714.1-202ENST00000568106 3107 ntTSL 5 BASIC15.11■□□□□ 0.01
PACS2Q86VP3 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PACS2Q86VP3 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC15.11■□□□□ 0.01
PACS2Q86VP3 HRC-201ENST00000252825 2385 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PACS2Q86VP3 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PACS2Q86VP3 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PACS2Q86VP3 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC15.11■□□□□ 0.01
PACS2Q86VP3 RNF43-205ENST00000581868 2610 ntTSL 2 BASIC15.11■□□□□ 0.01
PACS2Q86VP3 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
PACS2Q86VP3 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
PACS2Q86VP3 KY-202ENST00000503669 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
PACS2Q86VP3 TRIM46-205ENST00000392451 3195 ntTSL 2 BASIC15.1■□□□□ 0.01
PACS2Q86VP3 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
PACS2Q86VP3 CYB561D1-206ENST00000496961 3424 ntTSL 2 BASIC15.1■□□□□ 0.01
PACS2Q86VP3 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
PACS2Q86VP3 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC15.1■□□□□ 0.01
PACS2Q86VP3 MFAP4-202ENST00000395592 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
PACS2Q86VP3 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PACS2Q86VP3 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PACS2Q86VP3 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PACS2Q86VP3 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC15.1■□□□□ 0.01
PACS2Q86VP3 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC15.1■□□□□ 0.01
PACS2Q86VP3 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC15.1■□□□□ 0.01
PACS2Q86VP3 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC15.1■□□□□ 0.01
PACS2Q86VP3 AL645939.2-201ENST00000427340 991 ntBASIC15.1■□□□□ 0.01
PACS2Q86VP3 EIF2S2P3-201ENST00000428356 999 ntBASIC15.1■□□□□ 0.01
PACS2Q86VP3 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
PACS2Q86VP3 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC15.1■□□□□ 0.01
PACS2Q86VP3 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC15.1■□□□□ 0.01
PACS2Q86VP3 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC15.1■□□□□ 0.01
PACS2Q86VP3 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC15.1■□□□□ 0.01
PACS2Q86VP3 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PACS2Q86VP3 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
PACS2Q86VP3 MAMDC4-202ENST00000445819 3895 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
PACS2Q86VP3 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
PACS2Q86VP3 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC15.1■□□□□ 0.01
PACS2Q86VP3 MCRIP1-212ENST00000576730 2979 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 54.2 ms