Protein–RNA interactions for Protein: Q08623

PUDP, Pseudouridine-5'-phosphatase, humanhuman

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PUDPQ08623 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC13.66□□□□□ -0.22
PUDPQ08623 THSD4-201ENST00000261862 3133 ntTSL 5 BASIC13.66□□□□□ -0.22
PUDPQ08623 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
PUDPQ08623 CEP126-201ENST00000263468 7039 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
PUDPQ08623 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
PUDPQ08623 THAP2-201ENST00000308086 5719 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
PUDPQ08623 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
PUDPQ08623 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
PUDPQ08623 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC13.66□□□□□ -0.22
PUDPQ08623 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
PUDPQ08623 SUGP2-203ENST00000452918 6176 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
PUDPQ08623 PPP2R1A-201ENST00000322088 5380 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
PUDPQ08623 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC13.66□□□□□ -0.22
PUDPQ08623 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
PUDPQ08623 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
PUDPQ08623 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
PUDPQ08623 PCDHGA3-201ENST00000253812 4771 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
PUDPQ08623 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC13.66□□□□□ -0.22
PUDPQ08623 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC13.65□□□□□ -0.22
PUDPQ08623 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC13.65□□□□□ -0.22
PUDPQ08623 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
PUDPQ08623 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC13.65□□□□□ -0.22
PUDPQ08623 SUSD6-201ENST00000342745 5388 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
PUDPQ08623 OGFOD3-201ENST00000313056 4287 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
PUDPQ08623 KRT8P22-201ENST00000562317 1415 ntBASIC13.65□□□□□ -0.22
PUDPQ08623 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
PUDPQ08623 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
PUDPQ08623 AMT-204ENST00000427987 1646 ntTSL 5 BASIC13.65□□□□□ -0.22
PUDPQ08623 KIF6-203ENST00000394362 2394 ntTSL 5 BASIC13.65□□□□□ -0.22
PUDPQ08623 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
PUDPQ08623 KDR-201ENST00000263923 5831 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
PUDPQ08623 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC13.65□□□□□ -0.22
PUDPQ08623 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC13.65□□□□□ -0.22
PUDPQ08623 PDE8A-201ENST00000310298 3984 ntAPPRIS P4 TSL 1 (best) BASIC13.65□□□□□ -0.22
PUDPQ08623 DENND3-202ENST00000424248 4740 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
PUDPQ08623 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
PUDPQ08623 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
PUDPQ08623 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
PUDPQ08623 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
PUDPQ08623 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC13.65□□□□□ -0.22
PUDPQ08623 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
PUDPQ08623 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC13.65□□□□□ -0.22
PUDPQ08623 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
PUDPQ08623 AC236430.1-201ENST00000402231 743 ntBASIC13.65□□□□□ -0.22
PUDPQ08623 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC13.65□□□□□ -0.22
PUDPQ08623 AC098850.1-201ENST00000419919 790 ntBASIC13.65□□□□□ -0.22
PUDPQ08623 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC13.65□□□□□ -0.22
PUDPQ08623 OARD1-208ENST00000469104 704 ntTSL 2 BASIC13.65□□□□□ -0.22
PUDPQ08623 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
PUDPQ08623 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC13.65□□□□□ -0.22
PUDPQ08623 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC13.65□□□□□ -0.22
PUDPQ08623 CDK4-206ENST00000549606 558 ntTSL 2 BASIC13.65□□□□□ -0.22
PUDPQ08623 AL359711.2-201ENST00000563105 872 ntBASIC13.65□□□□□ -0.22
PUDPQ08623 MIR4745-201ENST00000577608 62 ntBASIC13.65□□□□□ -0.22
PUDPQ08623 AC133539.2-201ENST00000604757 467 ntBASIC13.65□□□□□ -0.22
PUDPQ08623 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC13.65□□□□□ -0.22
PUDPQ08623 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC13.65□□□□□ -0.22
PUDPQ08623 REV3L-207ENST00000435970 10943 ntTSL 2 BASIC13.65□□□□□ -0.22
PUDPQ08623 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
PUDPQ08623 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
PUDPQ08623 SF1-209ENST00000433274 2317 ntTSL 2 BASIC13.65□□□□□ -0.22
PUDPQ08623 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC13.65□□□□□ -0.22
PUDPQ08623 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC13.65□□□□□ -0.22
PUDPQ08623 LAMB2-202ENST00000418109 5674 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
PUDPQ08623 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
PUDPQ08623 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC13.65□□□□□ -0.22
PUDPQ08623 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC13.65□□□□□ -0.22
PUDPQ08623 LHFPL2-201ENST00000380345 5043 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
PUDPQ08623 CFAP74-209ENST00000493964 5247 ntAPPRIS P5 TSL 5 BASIC13.65□□□□□ -0.23
PUDPQ08623 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.23
PUDPQ08623 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
PUDPQ08623 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
PUDPQ08623 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
PUDPQ08623 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
PUDPQ08623 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC13.64□□□□□ -0.23
PUDPQ08623 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
PUDPQ08623 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
PUDPQ08623 EFR3B-202ENST00000401432 5162 ntTSL 2 BASIC13.64□□□□□ -0.23
PUDPQ08623 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC13.64□□□□□ -0.23
PUDPQ08623 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
PUDPQ08623 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC13.64□□□□□ -0.23
PUDPQ08623 SOAT1-204ENST00000540564 6861 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
PUDPQ08623 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
PUDPQ08623 SON-203ENST00000381679 7860 ntTSL 5 BASIC13.64□□□□□ -0.23
PUDPQ08623 LMBR1-201ENST00000353442 7997 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
PUDPQ08623 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
PUDPQ08623 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
PUDPQ08623 XPOT-201ENST00000332707 6414 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
PUDPQ08623 OR2C3-204ENST00000641802 8509 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
PUDPQ08623 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
PUDPQ08623 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
PUDPQ08623 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
PUDPQ08623 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
PUDPQ08623 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
PUDPQ08623 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
PUDPQ08623 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC13.64□□□□□ -0.23
PUDPQ08623 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
PUDPQ08623 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
PUDPQ08623 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC13.64□□□□□ -0.23
PUDPQ08623 HNRNPA1P48-201ENST00000562726 1377 ntBASIC13.64□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms