Protein–RNA interactions for Protein: P49759

CLK1, Dual specificity protein kinase CLK1, humanhuman

Known RBP Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1P49759 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
CLK1P49759 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
CLK1P49759 MRPS18AP1-201ENST00000414458 589 ntBASIC14.1□□□□□ -0.15
CLK1P49759 RASL12-203ENST00000434605 982 ntTSL 2 BASIC14.1□□□□□ -0.15
CLK1P49759 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC14.1□□□□□ -0.15
CLK1P49759 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC14.1□□□□□ -0.15
CLK1P49759 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC14.1□□□□□ -0.15
CLK1P49759 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC14.1□□□□□ -0.15
CLK1P49759 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC14.1□□□□□ -0.15
CLK1P49759 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
CLK1P49759 LCOR-203ENST00000371097 4852 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
CLK1P49759 CORO7-201ENST00000251166 3540 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CLK1P49759 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
CLK1P49759 SELENON-201ENST00000354177 4227 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
CLK1P49759 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
CLK1P49759 GLIS3-201ENST00000324333 6667 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CLK1P49759 TNFSF13-203ENST00000380535 2195 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CLK1P49759 DSE-201ENST00000331677 7237 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
CLK1P49759 CERKL-206ENST00000410087 3208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
CLK1P49759 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CLK1P49759 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
CLK1P49759 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CLK1P49759 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC14.1□□□□□ -0.15
CLK1P49759 RIMBP2-201ENST00000261655 6321 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CLK1P49759 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CLK1P49759 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CLK1P49759 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CLK1P49759 C11orf87-201ENST00000327419 5884 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CLK1P49759 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CLK1P49759 LDLRAD4-203ENST00000399848 8633 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CLK1P49759 PCDH8-201ENST00000338862 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CLK1P49759 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC14.1□□□□□ -0.15
CLK1P49759 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
CLK1P49759 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
CLK1P49759 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CLK1P49759 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC14.09□□□□□ -0.15
CLK1P49759 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC14.09□□□□□ -0.15
CLK1P49759 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC14.09□□□□□ -0.15
CLK1P49759 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
CLK1P49759 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC14.09□□□□□ -0.15
CLK1P49759 RIN3-201ENST00000216487 3859 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
CLK1P49759 MYO1C-218ENST00000575158 4804 ntAPPRIS P3 TSL 5 BASIC14.09□□□□□ -0.15
CLK1P49759 INO80-202ENST00000401393 5991 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CLK1P49759 OFD1-204ENST00000398395 3307 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
CLK1P49759 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC14.09□□□□□ -0.15
CLK1P49759 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CLK1P49759 CSF2RB-202ENST00000403662 4863 ntAPPRIS P2 TSL 5 BASIC14.09□□□□□ -0.15
CLK1P49759 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CLK1P49759 CNTN2-201ENST00000331830 7999 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
CLK1P49759 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CLK1P49759 HNRNPUL1-204ENST00000392006 3555 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
CLK1P49759 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
CLK1P49759 DYRK1B-202ENST00000348817 2448 ntTSL 5 BASIC14.09□□□□□ -0.15
CLK1P49759 AL121992.1-201ENST00000428945 2845 ntTSL 2 BASIC14.09□□□□□ -0.15
CLK1P49759 FBN3-207ENST00000601739 9086 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CLK1P49759 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
CLK1P49759 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CLK1P49759 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC14.09□□□□□ -0.15
CLK1P49759 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CLK1P49759 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC14.09□□□□□ -0.15
CLK1P49759 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC14.09□□□□□ -0.15
CLK1P49759 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC14.09□□□□□ -0.15
CLK1P49759 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CLK1P49759 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC14.09□□□□□ -0.15
CLK1P49759 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC14.09□□□□□ -0.15
CLK1P49759 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CLK1P49759 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC14.09□□□□□ -0.15
CLK1P49759 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC14.09□□□□□ -0.15
CLK1P49759 AC011467.4-201ENST00000594891 528 ntBASIC14.09□□□□□ -0.15
CLK1P49759 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC14.09□□□□□ -0.15
CLK1P49759 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC14.09□□□□□ -0.15
CLK1P49759 AC000095.1-201ENST00000603208 874 ntBASIC14.09□□□□□ -0.15
CLK1P49759 AL096865.1-201ENST00000606796 927 ntBASIC14.09□□□□□ -0.15
CLK1P49759 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
CLK1P49759 AC004840.1-201ENST00000636359 365 ntBASIC14.09□□□□□ -0.15
CLK1P49759 AL645728.2-202ENST00000641679 227 ntBASIC14.09□□□□□ -0.15
CLK1P49759 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CLK1P49759 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CLK1P49759 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CLK1P49759 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
CLK1P49759 BAIAP3-201ENST00000324385 4678 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
CLK1P49759 DISC1-221ENST00000620189 6689 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
CLK1P49759 GORASP1-201ENST00000319283 3722 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CLK1P49759 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CLK1P49759 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
CLK1P49759 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CLK1P49759 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC14.09□□□□□ -0.15
CLK1P49759 ZDHHC15-201ENST00000373367 5796 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
CLK1P49759 AC113367.3-201ENST00000508316 1912 ntBASIC14.09□□□□□ -0.15
CLK1P49759 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CLK1P49759 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CLK1P49759 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
CLK1P49759 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CLK1P49759 PLK2-201ENST00000274289 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CLK1P49759 MTHFR-210ENST00000641407 2387 ntBASIC14.09□□□□□ -0.15
CLK1P49759 C22orf34-204ENST00000414287 2197 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CLK1P49759 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CLK1P49759 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CLK1P49759 AC138894.1-201ENST00000635887 2824 ntTSL 5 BASIC14.09□□□□□ -0.15
CLK1P49759 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 92.4 ms