Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
HMGCLP35914 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC14.76□□□□□ -0.05
HMGCLP35914 RBM38-204ENST00000371219 760 ntTSL 2 BASIC14.76□□□□□ -0.05
HMGCLP35914 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
HMGCLP35914 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
HMGCLP35914 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC14.76□□□□□ -0.05
HMGCLP35914 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC14.76□□□□□ -0.05
HMGCLP35914 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
HMGCLP35914 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
HMGCLP35914 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
HMGCLP35914 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC14.76□□□□□ -0.05
HMGCLP35914 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC14.76□□□□□ -0.05
HMGCLP35914 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
HMGCLP35914 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC14.76□□□□□ -0.05
HMGCLP35914 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC14.76□□□□□ -0.05
HMGCLP35914 NAA38-206ENST00000576384 424 ntTSL 2 BASIC14.76□□□□□ -0.05
HMGCLP35914 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC14.76□□□□□ -0.05
HMGCLP35914 EEF1DP1-201ENST00000585891 896 ntBASIC14.76□□□□□ -0.05
HMGCLP35914 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC14.76□□□□□ -0.05
HMGCLP35914 AC010328.2-201ENST00000597698 1111 ntBASIC14.76□□□□□ -0.05
HMGCLP35914 AC244157.2-201ENST00000616239 1006 ntBASIC14.76□□□□□ -0.05
HMGCLP35914 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC14.76□□□□□ -0.05
HMGCLP35914 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
HMGCLP35914 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
HMGCLP35914 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
HMGCLP35914 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
HMGCLP35914 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
HMGCLP35914 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC14.76□□□□□ -0.05
HMGCLP35914 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
HMGCLP35914 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
HMGCLP35914 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
HMGCLP35914 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC14.76□□□□□ -0.05
HMGCLP35914 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
HMGCLP35914 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
HMGCLP35914 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
HMGCLP35914 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC14.75□□□□□ -0.05
HMGCLP35914 AC015802.1-201ENST00000588104 1449 ntBASIC14.75□□□□□ -0.05
HMGCLP35914 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
HMGCLP35914 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC14.75□□□□□ -0.05
HMGCLP35914 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC14.75□□□□□ -0.05
HMGCLP35914 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC14.75□□□□□ -0.05
HMGCLP35914 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
HMGCLP35914 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
HMGCLP35914 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
HMGCLP35914 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
HMGCLP35914 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
HMGCLP35914 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
HMGCLP35914 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
HMGCLP35914 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC14.75□□□□□ -0.05
HMGCLP35914 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC14.75□□□□□ -0.05
HMGCLP35914 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC14.75□□□□□ -0.05
HMGCLP35914 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
HMGCLP35914 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
HMGCLP35914 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
HMGCLP35914 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
HMGCLP35914 OLR1-203ENST00000432556 950 ntTSL 2 BASIC14.75□□□□□ -0.05
HMGCLP35914 BNIP3P42-201ENST00000454982 569 ntBASIC14.75□□□□□ -0.05
HMGCLP35914 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC14.75□□□□□ -0.05
HMGCLP35914 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC14.75□□□□□ -0.05
HMGCLP35914 AC100850.1-201ENST00000506768 649 ntBASIC14.75□□□□□ -0.05
HMGCLP35914 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC14.75□□□□□ -0.05
HMGCLP35914 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC14.75□□□□□ -0.05
HMGCLP35914 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC14.75□□□□□ -0.05
HMGCLP35914 CFL1-212ENST00000531413 636 ntTSL 3 BASIC14.75□□□□□ -0.05
HMGCLP35914 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC14.75□□□□□ -0.05
HMGCLP35914 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC14.75□□□□□ -0.05
HMGCLP35914 MIR4741-201ENST00000579822 90 ntBASIC14.75□□□□□ -0.05
HMGCLP35914 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
HMGCLP35914 CYGB-203ENST00000589145 788 ntTSL 3 BASIC14.75□□□□□ -0.05
HMGCLP35914 BNIP3P29-201ENST00000598302 571 ntBASIC14.75□□□□□ -0.05
HMGCLP35914 AC011447.5-201ENST00000616168 564 ntBASIC14.75□□□□□ -0.05
HMGCLP35914 AC027601.3-201ENST00000622907 509 ntBASIC14.75□□□□□ -0.05
HMGCLP35914 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC14.75□□□□□ -0.05
HMGCLP35914 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
HMGCLP35914 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
HMGCLP35914 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
HMGCLP35914 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC14.75□□□□□ -0.05
HMGCLP35914 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
HMGCLP35914 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
HMGCLP35914 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC14.75□□□□□ -0.05
HMGCLP35914 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
HMGCLP35914 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
HMGCLP35914 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
HMGCLP35914 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
HMGCLP35914 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
HMGCLP35914 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
HMGCLP35914 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
HMGCLP35914 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
HMGCLP35914 FLJ16779-201ENST00000612722 7638 ntBASIC14.74□□□□□ -0.05
HMGCLP35914 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
HMGCLP35914 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
HMGCLP35914 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC14.74□□□□□ -0.05
HMGCLP35914 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC14.74□□□□□ -0.05
HMGCLP35914 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
HMGCLP35914 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
HMGCLP35914 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
HMGCLP35914 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
HMGCLP35914 AC007191.1-201ENST00000623179 2995 ntBASIC14.74□□□□□ -0.05
HMGCLP35914 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
HMGCLP35914 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC14.74□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 218.6 ms