Protein–RNA interactions for Protein: O75909

CCNK, Cyclin-K, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNKO75909 TTC39A-202ENST00000262676 6287 ntTSL 2 BASIC12.93□□□□□ -0.34
CCNKO75909 DPY19L2P2-205ENST00000439473 3994 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
CCNKO75909 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CCNKO75909 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC12.93□□□□□ -0.34
CCNKO75909 PLIN3-207ENST00000592528 2154 ntTSL 2 BASIC12.93□□□□□ -0.34
CCNKO75909 RBM15-203ENST00000602849 3368 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
CCNKO75909 ILF3-201ENST00000250241 3035 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
CCNKO75909 MRPL17-201ENST00000288937 1969 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CCNKO75909 SYNCRIP-201ENST00000355238 6449 ntAPPRIS ALT1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CCNKO75909 FAM213A-203ENST00000372187 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CCNKO75909 SUPV3L1-201ENST00000359655 2484 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CCNKO75909 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
CCNKO75909 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC12.93□□□□□ -0.34
CCNKO75909 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC12.93□□□□□ -0.34
CCNKO75909 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC12.93□□□□□ -0.34
CCNKO75909 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
CCNKO75909 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC12.93□□□□□ -0.34
CCNKO75909 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
CCNKO75909 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
CCNKO75909 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC12.93□□□□□ -0.34
CCNKO75909 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC12.93□□□□□ -0.34
CCNKO75909 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
CCNKO75909 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC12.93□□□□□ -0.34
CCNKO75909 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
CCNKO75909 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC12.93□□□□□ -0.34
CCNKO75909 CYB561-216ENST00000582297 897 ntTSL 3 BASIC12.93□□□□□ -0.34
CCNKO75909 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CCNKO75909 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC12.93□□□□□ -0.34
CCNKO75909 GGTLC5P-201ENST00000617623 998 ntBASIC12.93□□□□□ -0.34
CCNKO75909 AC005394.2-201ENST00000592347 3113 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
CCNKO75909 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC12.93□□□□□ -0.34
CCNKO75909 CACNA1C-214ENST00000399634 7590 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
CCNKO75909 CACNA1C-222ENST00000406454 7590 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
CCNKO75909 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC12.93□□□□□ -0.34
CCNKO75909 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
CCNKO75909 FAM90A11P-201ENST00000518378 2218 ntBASIC12.93□□□□□ -0.34
CCNKO75909 ZMYND10-201ENST00000231749 2896 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
CCNKO75909 DYSF-203ENST00000409366 6606 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
CCNKO75909 DYSF-205ENST00000409651 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
CCNKO75909 TRIM3-203ENST00000525074 3044 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
CCNKO75909 GPC4-201ENST00000370828 4960 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CCNKO75909 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
CCNKO75909 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CCNKO75909 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC12.93□□□□□ -0.34
CCNKO75909 LINC02015-202ENST00000436078 2957 ntTSL 2 BASIC12.93□□□□□ -0.34
CCNKO75909 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC12.93□□□□□ -0.34
CCNKO75909 HNF4A-204ENST00000415691 2302 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
CCNKO75909 TNK1-201ENST00000570896 3122 ntAPPRIS P3 TSL 5 BASIC12.93□□□□□ -0.34
CCNKO75909 IKBKE-201ENST00000578328 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
CCNKO75909 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
CCNKO75909 DUOXA1-205ENST00000558422 1678 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
CCNKO75909 LINC00567-201ENST00000569854 3409 ntBASIC12.93□□□□□ -0.34
CCNKO75909 AL805961.2-201ENST00000642139 4817 ntBASIC12.92□□□□□ -0.34
CCNKO75909 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
CCNKO75909 MAP7-205ENST00000544465 2744 ntAPPRIS ALT2 TSL 2 BASIC12.92□□□□□ -0.34
CCNKO75909 ZBED8-201ENST00000408953 2851 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
CCNKO75909 AC012508.2-201ENST00000567613 1472 ntBASIC12.92□□□□□ -0.34
CCNKO75909 CARHSP1-202ENST00000396593 3026 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CCNKO75909 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CCNKO75909 TAX1BP1-207ENST00000433216 3174 ntTSL 2 BASIC12.92□□□□□ -0.34
CCNKO75909 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC12.92□□□□□ -0.34
CCNKO75909 INIP-203ENST00000374242 4233 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CCNKO75909 MEF2D-204ENST00000464356 5598 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
CCNKO75909 EPS15L1-202ENST00000455140 3266 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
CCNKO75909 COL1A1-201ENST00000225964 6727 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CCNKO75909 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CCNKO75909 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CCNKO75909 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CCNKO75909 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC12.92□□□□□ -0.34
CCNKO75909 RBM17P3-201ENST00000417687 1192 ntBASIC12.92□□□□□ -0.34
CCNKO75909 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
CCNKO75909 SLC26A6-207ENST00000420764 2630 ntAPPRIS ALT1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CCNKO75909 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC12.92□□□□□ -0.34
CCNKO75909 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC12.92□□□□□ -0.34
CCNKO75909 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC12.92□□□□□ -0.34
CCNKO75909 FCHSD1-209ENST00000522783 2477 ntTSL 5 BASIC12.92□□□□□ -0.34
CCNKO75909 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC12.92□□□□□ -0.34
CCNKO75909 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
CCNKO75909 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC12.92□□□□□ -0.34
CCNKO75909 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC12.92□□□□□ -0.34
CCNKO75909 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
CCNKO75909 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC12.92□□□□□ -0.34
CCNKO75909 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC12.92□□□□□ -0.34
CCNKO75909 POLDIP3-209ENST00000617178 2006 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
CCNKO75909 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CCNKO75909 AFDN-206ENST00000392112 7459 ntTSL 5 BASIC12.92□□□□□ -0.34
CCNKO75909 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CCNKO75909 RGS3-205ENST00000374134 2862 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
CCNKO75909 CELF2-216ENST00000637215 2724 ntTSL 5 BASIC12.92□□□□□ -0.34
CCNKO75909 SEC24B-201ENST00000265175 5083 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
CCNKO75909 DGCR2-201ENST00000263196 4480 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CCNKO75909 SIGLEC12-201ENST00000291707 2121 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CCNKO75909 NCLP1-201ENST00000445357 1963 ntBASIC12.92□□□□□ -0.34
CCNKO75909 CAD-202ENST00000403525 6900 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
CCNKO75909 AC012569.1-201ENST00000591191 1524 ntBASIC12.92□□□□□ -0.34
CCNKO75909 SEC31A-208ENST00000448323 4255 ntAPPRIS P4 TSL 5 BASIC12.92□□□□□ -0.34
CCNKO75909 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC12.92□□□□□ -0.34
CCNKO75909 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CCNKO75909 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC12.92□□□□□ -0.34
CCNKO75909 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC12.92□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 55.6 ms