Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TRIM38O00635 AC117489.1-201ENST00000625169 3217 ntBASIC15.03■□□□□ -0
TRIM38O00635 WASH3P-207ENST00000560956 1394 ntBASIC15.03■□□□□ -0
TRIM38O00635 MCHR2-202ENST00000369212 1311 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TRIM38O00635 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
TRIM38O00635 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TRIM38O00635 RNU1-114P-201ENST00000365297 166 ntBASIC15.03■□□□□ -0
TRIM38O00635 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC15.03■□□□□ -0
TRIM38O00635 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC15.03■□□□□ -0
TRIM38O00635 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC15.03■□□□□ -0
TRIM38O00635 DMKN-204ENST00000408915 600 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
TRIM38O00635 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC15.03■□□□□ -0
TRIM38O00635 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC15.03■□□□□ -0
TRIM38O00635 KLF2P2-201ENST00000416807 1039 ntBASIC15.03■□□□□ -0
TRIM38O00635 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
TRIM38O00635 AL591846.1-201ENST00000451736 433 ntBASIC15.03■□□□□ -0
TRIM38O00635 RCAN1-212ENST00000492600 935 ntTSL 2 BASIC15.03■□□□□ -0
TRIM38O00635 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
TRIM38O00635 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC15.03■□□□□ -0
TRIM38O00635 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC15.03■□□□□ -0
TRIM38O00635 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC15.03■□□□□ -0
TRIM38O00635 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC15.03■□□□□ -0
TRIM38O00635 AC006453.4-201ENST00000636949 1252 ntBASIC15.03■□□□□ -0
TRIM38O00635 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TRIM38O00635 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TRIM38O00635 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC15.03■□□□□ -0
TRIM38O00635 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TRIM38O00635 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TRIM38O00635 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TRIM38O00635 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TRIM38O00635 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC15.03■□□□□ -0
TRIM38O00635 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC15.03■□□□□ -0
TRIM38O00635 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC15.03■□□□□ -0
TRIM38O00635 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC15.03■□□□□ -0
TRIM38O00635 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC15.03■□□□□ -0
TRIM38O00635 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
TRIM38O00635 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC15.03■□□□□ -0
TRIM38O00635 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TRIM38O00635 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TRIM38O00635 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC15.03■□□□□ -0
TRIM38O00635 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC15.03■□□□□ -0
TRIM38O00635 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC15.03■□□□□ -0
TRIM38O00635 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
TRIM38O00635 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02■□□□□ -0
TRIM38O00635 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
TRIM38O00635 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
TRIM38O00635 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
TRIM38O00635 AC006504.5-208ENST00000588784 2401 ntBASIC15.02■□□□□ -0
TRIM38O00635 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
TRIM38O00635 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC15.02■□□□□ -0
TRIM38O00635 RPS3-201ENST00000278572 907 ntTSL 3 BASIC15.02■□□□□ -0
TRIM38O00635 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
TRIM38O00635 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC15.02■□□□□ -0
TRIM38O00635 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
TRIM38O00635 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC15.02■□□□□ -0
TRIM38O00635 MPV17-205ENST00000402310 906 ntTSL 5 BASIC15.02■□□□□ -0
TRIM38O00635 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
TRIM38O00635 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC15.02■□□□□ -0
TRIM38O00635 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
TRIM38O00635 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC15.02■□□□□ -0
TRIM38O00635 HOMER2P2-201ENST00000451621 847 ntBASIC15.02■□□□□ -0
TRIM38O00635 OARD1-212ENST00000482515 832 ntTSL 2 BASIC15.02■□□□□ -0
TRIM38O00635 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
TRIM38O00635 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
TRIM38O00635 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC15.02■□□□□ -0
TRIM38O00635 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC15.02■□□□□ -0
TRIM38O00635 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC15.02■□□□□ -0
TRIM38O00635 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC15.02■□□□□ -0
TRIM38O00635 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC15.02■□□□□ -0
TRIM38O00635 AC005695.3-201ENST00000614522 232 ntBASIC15.02■□□□□ -0
TRIM38O00635 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
TRIM38O00635 GPR39-203ENST00000622084 900 ntTSL 5 BASIC15.02■□□□□ -0
TRIM38O00635 AL008638.5-201ENST00000623814 1298 ntBASIC15.02■□□□□ -0
TRIM38O00635 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
TRIM38O00635 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
TRIM38O00635 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
TRIM38O00635 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC15.02□□□□□ -0.01
TRIM38O00635 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
TRIM38O00635 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
TRIM38O00635 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
TRIM38O00635 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
TRIM38O00635 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC15.02□□□□□ -0.01
TRIM38O00635 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
TRIM38O00635 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC15.02□□□□□ -0.01
TRIM38O00635 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
TRIM38O00635 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
TRIM38O00635 BX640514.1-201ENST00000583223 1918 ntBASIC15.02□□□□□ -0.01
TRIM38O00635 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
TRIM38O00635 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRIM38O00635 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC15.01□□□□□ -0.01
TRIM38O00635 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
TRIM38O00635 MFF-204ENST00000353339 2186 ntTSL 5 BASIC15.01□□□□□ -0.01
TRIM38O00635 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRIM38O00635 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRIM38O00635 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRIM38O00635 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRIM38O00635 CALM1-216ENST00000626705 1341 ntTSL 5 BASIC15.01□□□□□ -0.01
TRIM38O00635 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
TRIM38O00635 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
TRIM38O00635 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms