Protein–RNA interactions for Protein: A6NER0

TBC1D3F, TBC1 domain family member 3F, humanhuman

Predicted RBP Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3FA6NER0 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
TBC1D3FA6NER0 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC14.78□□□□□ -0.04
TBC1D3FA6NER0 MIR6720-201ENST00000611664 98 ntBASIC14.78□□□□□ -0.04
TBC1D3FA6NER0 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
TBC1D3FA6NER0 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC14.78□□□□□ -0.04
TBC1D3FA6NER0 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TBC1D3FA6NER0 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TBC1D3FA6NER0 ABR-205ENST00000544583 5595 ntTSL 2 BASIC14.78□□□□□ -0.04
TBC1D3FA6NER0 SYNGR1-203ENST00000328933 4391 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TBC1D3FA6NER0 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TBC1D3FA6NER0 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
TBC1D3FA6NER0 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TBC1D3FA6NER0 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC14.78□□□□□ -0.04
TBC1D3FA6NER0 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TBC1D3FA6NER0 ZBED1P1-201ENST00000502364 1930 ntBASIC14.78□□□□□ -0.04
TBC1D3FA6NER0 MBLAC2-202ENST00000514906 1936 ntBASIC14.78□□□□□ -0.04
TBC1D3FA6NER0 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
TBC1D3FA6NER0 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TBC1D3FA6NER0 MYB-242ENST00000618728 3545 ntTSL 5 BASIC14.78□□□□□ -0.04
TBC1D3FA6NER0 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC14.77□□□□□ -0.04
TBC1D3FA6NER0 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
TBC1D3FA6NER0 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
TBC1D3FA6NER0 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
TBC1D3FA6NER0 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
TBC1D3FA6NER0 PPT1-215ENST00000641471 2368 ntBASIC14.77□□□□□ -0.04
TBC1D3FA6NER0 ZCCHC17-207ENST00000616859 1458 ntTSL 4 BASIC14.77□□□□□ -0.04
TBC1D3FA6NER0 ZCCHC17-208ENST00000618216 1489 ntTSL 3 BASIC14.77□□□□□ -0.04
TBC1D3FA6NER0 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
TBC1D3FA6NER0 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
TBC1D3FA6NER0 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC14.77□□□□□ -0.04
TBC1D3FA6NER0 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
TBC1D3FA6NER0 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
TBC1D3FA6NER0 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
TBC1D3FA6NER0 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
TBC1D3FA6NER0 AC097376.2-205ENST00000610159 5334 ntBASIC14.77□□□□□ -0.04
TBC1D3FA6NER0 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
TBC1D3FA6NER0 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
TBC1D3FA6NER0 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC14.77□□□□□ -0.04
TBC1D3FA6NER0 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
TBC1D3FA6NER0 RN7SKP214-201ENST00000364208 315 ntBASIC14.77□□□□□ -0.05
TBC1D3FA6NER0 KCNAB2-207ENST00000378111 822 ntTSL 3 BASIC14.77□□□□□ -0.05
TBC1D3FA6NER0 FAM177A1-202ENST00000382406 858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
TBC1D3FA6NER0 AC092506.1-202ENST00000401022 528 ntBASIC14.77□□□□□ -0.05
TBC1D3FA6NER0 ACTG1P2-201ENST00000415776 1125 ntBASIC14.77□□□□□ -0.05
TBC1D3FA6NER0 ACTG1P11-201ENST00000425411 1125 ntBASIC14.77□□□□□ -0.05
TBC1D3FA6NER0 FOXP4-AS1-203ENST00000439386 404 ntTSL 3 BASIC14.77□□□□□ -0.05
TBC1D3FA6NER0 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
TBC1D3FA6NER0 PCOLCE2-208ENST00000485766 1088 ntTSL 5 BASIC14.77□□□□□ -0.05
TBC1D3FA6NER0 IMP3P2-201ENST00000489760 475 ntBASIC14.77□□□□□ -0.05
TBC1D3FA6NER0 GCOM2-201ENST00000509133 1104 ntBASIC14.77□□□□□ -0.05
TBC1D3FA6NER0 AC239802.2-201ENST00000532137 554 ntTSL 4 BASIC14.77□□□□□ -0.05
TBC1D3FA6NER0 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.05
TBC1D3FA6NER0 FOS-206ENST00000555347 1280 ntTSL 2 BASIC14.77□□□□□ -0.05
TBC1D3FA6NER0 AC105129.2-201ENST00000559536 390 ntBASIC14.77□□□□□ -0.05
TBC1D3FA6NER0 AP007216.2-201ENST00000562094 299 ntTSL 3 BASIC14.77□□□□□ -0.05
TBC1D3FA6NER0 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC14.77□□□□□ -0.05
TBC1D3FA6NER0 CMTM3-215ENST00000568477 687 ntTSL 3 BASIC14.77□□□□□ -0.05
TBC1D3FA6NER0 FBXL12-212ENST00000592067 879 ntTSL 2 BASIC14.77□□□□□ -0.05
TBC1D3FA6NER0 RPL35-206ENST00000629845 340 ntTSL 5 BASIC14.77□□□□□ -0.05
TBC1D3FA6NER0 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
TBC1D3FA6NER0 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
TBC1D3FA6NER0 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
TBC1D3FA6NER0 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
TBC1D3FA6NER0 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC14.77□□□□□ -0.05
TBC1D3FA6NER0 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
TBC1D3FA6NER0 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
TBC1D3FA6NER0 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
TBC1D3FA6NER0 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC14.77□□□□□ -0.05
TBC1D3FA6NER0 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.05
TBC1D3FA6NER0 API5-203ENST00000455725 2257 ntTSL 2 BASIC14.77□□□□□ -0.05
TBC1D3FA6NER0 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC14.77□□□□□ -0.05
TBC1D3FA6NER0 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
TBC1D3FA6NER0 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
TBC1D3FA6NER0 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
TBC1D3FA6NER0 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
TBC1D3FA6NER0 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
TBC1D3FA6NER0 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
TBC1D3FA6NER0 AC073347.1-201ENST00000421633 2643 ntBASIC14.77□□□□□ -0.05
TBC1D3FA6NER0 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
TBC1D3FA6NER0 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
TBC1D3FA6NER0 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
TBC1D3FA6NER0 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TBC1D3FA6NER0 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TBC1D3FA6NER0 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
TBC1D3FA6NER0 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TBC1D3FA6NER0 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
TBC1D3FA6NER0 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC14.76□□□□□ -0.05
TBC1D3FA6NER0 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC14.76□□□□□ -0.05
TBC1D3FA6NER0 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
TBC1D3FA6NER0 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
TBC1D3FA6NER0 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TBC1D3FA6NER0 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TBC1D3FA6NER0 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
TBC1D3FA6NER0 CSNK2B-201ENST00000375865 908 ntAPPRIS P1 TSL 3 BASIC14.76□□□□□ -0.05
TBC1D3FA6NER0 NRM-202ENST00000376420 1228 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
TBC1D3FA6NER0 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
TBC1D3FA6NER0 HNRNPA1P41-201ENST00000397777 928 ntBASIC14.76□□□□□ -0.05
TBC1D3FA6NER0 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TBC1D3FA6NER0 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TBC1D3FA6NER0 LINC01118-202ENST00000409912 1023 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms