Protein–RNA interactions for Protein: Q9P219

CCDC88C, Protein Daple, humanhuman

Predictions only

Length 2,028 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88CQ9P219 SF1-209ENST00000433274 2317 ntTSL 2 BASIC14.2□□□□□ -0.14
CCDC88CQ9P219 ABR-228ENST00000574437 3196 ntTSL 5 BASIC14.2□□□□□ -0.14
CCDC88CQ9P219 PSME1-201ENST00000206451 1006 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CCDC88CQ9P219 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CCDC88CQ9P219 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
CCDC88CQ9P219 RN7SKP175-201ENST00000408472 289 ntBASIC14.2□□□□□ -0.14
CCDC88CQ9P219 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC14.2□□□□□ -0.14
CCDC88CQ9P219 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
CCDC88CQ9P219 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC14.2□□□□□ -0.14
CCDC88CQ9P219 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC14.2□□□□□ -0.14
CCDC88CQ9P219 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC14.2□□□□□ -0.14
CCDC88CQ9P219 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC14.2□□□□□ -0.14
CCDC88CQ9P219 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC14.2□□□□□ -0.14
CCDC88CQ9P219 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC14.2□□□□□ -0.14
CCDC88CQ9P219 ENPP7P14-201ENST00000621765 1040 ntBASIC14.2□□□□□ -0.14
CCDC88CQ9P219 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC14.2□□□□□ -0.14
CCDC88CQ9P219 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CCDC88CQ9P219 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CCDC88CQ9P219 CNTNAP3P2-201ENST00000617175 3861 ntBASIC14.2□□□□□ -0.14
CCDC88CQ9P219 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
CCDC88CQ9P219 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CCDC88CQ9P219 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
CCDC88CQ9P219 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CCDC88CQ9P219 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
CCDC88CQ9P219 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC14.2□□□□□ -0.14
CCDC88CQ9P219 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
CCDC88CQ9P219 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
CCDC88CQ9P219 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CCDC88CQ9P219 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC14.2□□□□□ -0.14
CCDC88CQ9P219 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
CCDC88CQ9P219 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC14.2□□□□□ -0.14
CCDC88CQ9P219 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CCDC88CQ9P219 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
CCDC88CQ9P219 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CCDC88CQ9P219 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC14.2□□□□□ -0.14
CCDC88CQ9P219 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CCDC88CQ9P219 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CCDC88CQ9P219 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CCDC88CQ9P219 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CCDC88CQ9P219 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CCDC88CQ9P219 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CCDC88CQ9P219 AL136309.1-201ENST00000403917 691 ntBASIC14.2□□□□□ -0.14
CCDC88CQ9P219 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC14.2□□□□□ -0.14
CCDC88CQ9P219 DNAJC27-AS1-207ENST00000451291 488 ntTSL 3 BASIC14.2□□□□□ -0.14
CCDC88CQ9P219 SERPINA13P-202ENST00000478994 924 ntBASIC14.2□□□□□ -0.14
CCDC88CQ9P219 AC104241.2-201ENST00000532748 789 ntTSL 3 BASIC14.2□□□□□ -0.14
CCDC88CQ9P219 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC14.2□□□□□ -0.14
CCDC88CQ9P219 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CCDC88CQ9P219 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CCDC88CQ9P219 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC14.2□□□□□ -0.14
CCDC88CQ9P219 AC012322.1-201ENST00000561657 861 ntTSL 3 BASIC14.2□□□□□ -0.14
CCDC88CQ9P219 MIR3615-201ENST00000581999 87 ntBASIC14.2□□□□□ -0.14
CCDC88CQ9P219 AL358472.3-201ENST00000608147 415 ntBASIC14.2□□□□□ -0.14
CCDC88CQ9P219 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
CCDC88CQ9P219 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
CCDC88CQ9P219 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CCDC88CQ9P219 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
CCDC88CQ9P219 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC14.2□□□□□ -0.14
CCDC88CQ9P219 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CCDC88CQ9P219 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC14.2□□□□□ -0.14
CCDC88CQ9P219 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CCDC88CQ9P219 CHIA-206ENST00000430615 1320 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CCDC88CQ9P219 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CCDC88CQ9P219 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CCDC88CQ9P219 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
CCDC88CQ9P219 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC14.19□□□□□ -0.14
CCDC88CQ9P219 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC14.19□□□□□ -0.14
CCDC88CQ9P219 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC14.19□□□□□ -0.14
CCDC88CQ9P219 AL023775.1-201ENST00000454907 1746 ntBASIC14.19□□□□□ -0.14
CCDC88CQ9P219 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CCDC88CQ9P219 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
CCDC88CQ9P219 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CCDC88CQ9P219 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CCDC88CQ9P219 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
CCDC88CQ9P219 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC14.19□□□□□ -0.14
CCDC88CQ9P219 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
CCDC88CQ9P219 SDCCAG3P2-201ENST00000326105 1023 ntBASIC14.19□□□□□ -0.14
CCDC88CQ9P219 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC14.19□□□□□ -0.14
CCDC88CQ9P219 CSH2-202ENST00000345366 598 ntTSL 5 BASIC14.19□□□□□ -0.14
CCDC88CQ9P219 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CCDC88CQ9P219 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC14.19□□□□□ -0.14
CCDC88CQ9P219 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
CCDC88CQ9P219 HIST2H2BB-201ENST00000449108 381 ntBASIC14.19□□□□□ -0.14
CCDC88CQ9P219 IGHJ2P-201ENST00000454480 60 ntBASIC14.19□□□□□ -0.14
CCDC88CQ9P219 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC14.19□□□□□ -0.14
CCDC88CQ9P219 ACR-203ENST00000529621 708 ntTSL 5 BASIC14.19□□□□□ -0.14
CCDC88CQ9P219 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
CCDC88CQ9P219 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
CCDC88CQ9P219 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
CCDC88CQ9P219 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
CCDC88CQ9P219 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC14.19□□□□□ -0.14
CCDC88CQ9P219 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CCDC88CQ9P219 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
CCDC88CQ9P219 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC14.19□□□□□ -0.14
CCDC88CQ9P219 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CCDC88CQ9P219 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC14.19□□□□□ -0.14
CCDC88CQ9P219 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
CCDC88CQ9P219 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
CCDC88CQ9P219 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CCDC88CQ9P219 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC14.19□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms