Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
UPF2Q9HAU5 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
UPF2Q9HAU5 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
UPF2Q9HAU5 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC18.35■□□□□ 0.53
UPF2Q9HAU5 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC18.35■□□□□ 0.53
UPF2Q9HAU5 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
UPF2Q9HAU5 AC016876.1-201ENST00000415124 352 ntTSL 3 BASIC18.35■□□□□ 0.53
UPF2Q9HAU5 RAD18-204ENST00000418463 563 ntTSL 4 BASIC18.35■□□□□ 0.53
UPF2Q9HAU5 RAD18-205ENST00000421052 582 ntTSL 3 BASIC18.35■□□□□ 0.53
UPF2Q9HAU5 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
UPF2Q9HAU5 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
UPF2Q9HAU5 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC18.35■□□□□ 0.53
UPF2Q9HAU5 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC18.35■□□□□ 0.53
UPF2Q9HAU5 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
UPF2Q9HAU5 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC18.35■□□□□ 0.53
UPF2Q9HAU5 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
UPF2Q9HAU5 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
UPF2Q9HAU5 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
UPF2Q9HAU5 TBC1D22A-201ENST00000337137 3787 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
UPF2Q9HAU5 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
UPF2Q9HAU5 GLIS3-201ENST00000324333 6667 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
UPF2Q9HAU5 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC18.35■□□□□ 0.53
UPF2Q9HAU5 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
UPF2Q9HAU5 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC18.35■□□□□ 0.53
UPF2Q9HAU5 CILP2-201ENST00000291495 4199 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
UPF2Q9HAU5 KCNH6-202ENST00000456941 2928 ntTSL 5 BASIC18.35■□□□□ 0.53
UPF2Q9HAU5 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC18.35■□□□□ 0.53
UPF2Q9HAU5 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
UPF2Q9HAU5 KIAA0895L-201ENST00000290881 3550 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
UPF2Q9HAU5 EML4-203ENST00000402711 3568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
UPF2Q9HAU5 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC18.35■□□□□ 0.53
UPF2Q9HAU5 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
UPF2Q9HAU5 SSTR1-201ENST00000267377 4295 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
UPF2Q9HAU5 RIPOR1-204ENST00000428437 4152 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
UPF2Q9HAU5 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
UPF2Q9HAU5 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC18.34■□□□□ 0.53
UPF2Q9HAU5 WNT7A-201ENST00000285018 4041 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
UPF2Q9HAU5 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
UPF2Q9HAU5 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC18.34■□□□□ 0.53
UPF2Q9HAU5 BAIAP3-201ENST00000324385 4678 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
UPF2Q9HAU5 ATP13A1-202ENST00000357324 3861 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
UPF2Q9HAU5 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC18.34■□□□□ 0.53
UPF2Q9HAU5 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
UPF2Q9HAU5 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
UPF2Q9HAU5 TCAM1P-207ENST00000485295 1537 ntBASIC18.34■□□□□ 0.53
UPF2Q9HAU5 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC18.34■□□□□ 0.53
UPF2Q9HAU5 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
UPF2Q9HAU5 SMIM14-201ENST00000295958 6483 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
UPF2Q9HAU5 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
UPF2Q9HAU5 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
UPF2Q9HAU5 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
UPF2Q9HAU5 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
UPF2Q9HAU5 STRCP1-201ENST00000509801 5328 ntBASIC18.34■□□□□ 0.53
UPF2Q9HAU5 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
UPF2Q9HAU5 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
UPF2Q9HAU5 SUN1-204ENST00000403868 978 ntTSL 2 BASIC18.34■□□□□ 0.53
UPF2Q9HAU5 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC18.34■□□□□ 0.53
UPF2Q9HAU5 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC18.34■□□□□ 0.53
UPF2Q9HAU5 PGAM5P1-201ENST00000518923 814 ntBASIC18.34■□□□□ 0.53
UPF2Q9HAU5 AP001059.3-201ENST00000619053 235 ntBASIC18.34■□□□□ 0.53
UPF2Q9HAU5 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC18.34■□□□□ 0.53
UPF2Q9HAU5 AL109936.8-201ENST00000641772 604 ntBASIC18.34■□□□□ 0.53
UPF2Q9HAU5 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
UPF2Q9HAU5 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC18.34■□□□□ 0.53
UPF2Q9HAU5 PCDHA5-203ENST00000614258 4248 ntBASIC18.34■□□□□ 0.53
UPF2Q9HAU5 MUC1-223ENST00000611571 4170 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
UPF2Q9HAU5 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
UPF2Q9HAU5 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
UPF2Q9HAU5 POU2F2-202ENST00000389341 6901 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
UPF2Q9HAU5 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
UPF2Q9HAU5 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
UPF2Q9HAU5 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
UPF2Q9HAU5 CHRNA3-201ENST00000326828 3202 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
UPF2Q9HAU5 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
UPF2Q9HAU5 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
UPF2Q9HAU5 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
UPF2Q9HAU5 CDC25B-205ENST00000439880 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
UPF2Q9HAU5 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC18.33■□□□□ 0.53
UPF2Q9HAU5 TLE1-203ENST00000376499 3893 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
UPF2Q9HAU5 SHPK-201ENST00000225519 3838 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
UPF2Q9HAU5 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
UPF2Q9HAU5 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC18.33■□□□□ 0.53
UPF2Q9HAU5 ADK-205ENST00000539909 1866 ntTSL 2 BASIC18.33■□□□□ 0.53
UPF2Q9HAU5 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC18.33■□□□□ 0.53
UPF2Q9HAU5 KSR1-204ENST00000398988 7237 ntAPPRIS P2 TSL 5 BASIC18.33■□□□□ 0.53
UPF2Q9HAU5 PPP2R5E-201ENST00000337537 6659 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
UPF2Q9HAU5 MBP-205ENST00000397860 4844 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
UPF2Q9HAU5 CFAP74-209ENST00000493964 5247 ntAPPRIS P5 TSL 5 BASIC18.33■□□□□ 0.52
UPF2Q9HAU5 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
UPF2Q9HAU5 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
UPF2Q9HAU5 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC18.33■□□□□ 0.52
UPF2Q9HAU5 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
UPF2Q9HAU5 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC18.33■□□□□ 0.52
UPF2Q9HAU5 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC18.33■□□□□ 0.52
UPF2Q9HAU5 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
UPF2Q9HAU5 AC023141.5-201ENST00000458585 616 ntBASIC18.33■□□□□ 0.52
UPF2Q9HAU5 HLA-V-204ENST00000476601 1289 ntBASIC18.33■□□□□ 0.52
UPF2Q9HAU5 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
UPF2Q9HAU5 AL512361.1-201ENST00000554200 418 ntBASIC18.33■□□□□ 0.52
UPF2Q9HAU5 AC051619.7-201ENST00000568314 623 ntBASIC18.33■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 163.6 ms