Protein–RNA interactions for Protein: Q9BYE3

LCE3D, Late cornified envelope protein 3D, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCE3DQ9BYE3 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC4.05□□□□□ -1.76
LCE3DQ9BYE3 AC008608.2-201ENST00000606089 416 ntBASIC4.05□□□□□ -1.76
LCE3DQ9BYE3 AC026979.3-201ENST00000607315 403 ntBASIC4.05□□□□□ -1.76
LCE3DQ9BYE3 AC012306.2-201ENST00000609350 630 ntBASIC4.05□□□□□ -1.76
LCE3DQ9BYE3 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC4.05□□□□□ -1.76
LCE3DQ9BYE3 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC4.05□□□□□ -1.76
LCE3DQ9BYE3 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC4.05□□□□□ -1.76
LCE3DQ9BYE3 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC4.05□□□□□ -1.76
LCE3DQ9BYE3 UBE2Q2P6-202ENST00000617217 443 ntTSL 5 BASIC4.05□□□□□ -1.76
LCE3DQ9BYE3 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC4.05□□□□□ -1.76
LCE3DQ9BYE3 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
LCE3DQ9BYE3 AL034417.3-201ENST00000641100 1043 ntBASIC4.05□□□□□ -1.76
LCE3DQ9BYE3 AL031430.1-201ENST00000642067 1039 ntBASIC4.05□□□□□ -1.76
LCE3DQ9BYE3 SHANK2-211ENST00000449833 8850 ntTSL 5 BASIC4.05□□□□□ -1.76
LCE3DQ9BYE3 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
LCE3DQ9BYE3 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC4.05□□□□□ -1.76
LCE3DQ9BYE3 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC4.05□□□□□ -1.76
LCE3DQ9BYE3 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC4.05□□□□□ -1.76
LCE3DQ9BYE3 USP33-202ENST00000370792 2917 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
LCE3DQ9BYE3 RRAGB-202ENST00000374941 2061 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
LCE3DQ9BYE3 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC4.05□□□□□ -1.76
LCE3DQ9BYE3 RRBP1-202ENST00000360807 3727 ntAPPRIS P2 TSL 1 (best) BASIC4.05□□□□□ -1.76
LCE3DQ9BYE3 SH2D5-201ENST00000375031 3705 ntTSL 2 BASIC4.05□□□□□ -1.76
LCE3DQ9BYE3 SF1-201ENST00000227503 2850 ntAPPRIS P3 TSL 1 (best) BASIC4.05□□□□□ -1.76
LCE3DQ9BYE3 RNF213-201ENST00000319921 5316 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
LCE3DQ9BYE3 ZNF419-202ENST00000347466 3654 ntAPPRIS P3 TSL 2 BASIC4.05□□□□□ -1.76
LCE3DQ9BYE3 EML1-203ENST00000334192 4064 ntTSL 5 BASIC4.05□□□□□ -1.76
LCE3DQ9BYE3 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
LCE3DQ9BYE3 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
LCE3DQ9BYE3 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
LCE3DQ9BYE3 ADAMTS20-201ENST00000389420 6076 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
LCE3DQ9BYE3 CXCR5-201ENST00000292174 4431 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
LCE3DQ9BYE3 CDC6-201ENST00000209728 4810 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
LCE3DQ9BYE3 Z82170.1-201ENST00000625081 3192 ntBASIC4.05□□□□□ -1.76
LCE3DQ9BYE3 PRAME-214ENST00000543184 2758 ntAPPRIS P2 TSL 1 (best) BASIC4.05□□□□□ -1.76
LCE3DQ9BYE3 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
LCE3DQ9BYE3 KIF13A-201ENST00000259711 5941 ntAPPRIS P4 TSL 1 (best) BASIC4.05□□□□□ -1.76
LCE3DQ9BYE3 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
LCE3DQ9BYE3 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC4.05□□□□□ -1.76
LCE3DQ9BYE3 TNFAIP3-206ENST00000612899 4735 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
LCE3DQ9BYE3 KIFC3-202ENST00000421376 3128 ntTSL 2 BASIC4.05□□□□□ -1.76
LCE3DQ9BYE3 PTPRN2-202ENST00000389416 4692 ntAPPRIS ALT2 TSL 1 (best) BASIC4.05□□□□□ -1.76
LCE3DQ9BYE3 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC4.05□□□□□ -1.76
LCE3DQ9BYE3 TMEM260-201ENST00000261556 4264 ntAPPRIS P1 TSL 2 BASIC4.05□□□□□ -1.76
LCE3DQ9BYE3 TENM3-204ENST00000511685 10896 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
LCE3DQ9BYE3 KRT75-201ENST00000252245 2324 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
LCE3DQ9BYE3 FZD7-201ENST00000286201 3859 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
LCE3DQ9BYE3 AL355390.1-201ENST00000325811 2328 ntTSL 2 BASIC4.05□□□□□ -1.76
LCE3DQ9BYE3 AL122018.1-201ENST00000446607 2310 ntBASIC4.05□□□□□ -1.76
LCE3DQ9BYE3 CD99L2-205ENST00000437787 3493 ntTSL 2 BASIC4.05□□□□□ -1.76
LCE3DQ9BYE3 POLR1B-216ENST00000537335 4961 ntTSL 2 BASIC4.05□□□□□ -1.76
LCE3DQ9BYE3 MKX-201ENST00000375790 3846 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
LCE3DQ9BYE3 PLA2G3-201ENST00000215885 2697 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
LCE3DQ9BYE3 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC4.05□□□□□ -1.76
LCE3DQ9BYE3 SIRPA-204ENST00000622179 4570 ntAPPRIS ALT1 TSL 5 BASIC4.05□□□□□ -1.76
LCE3DQ9BYE3 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC4.05□□□□□ -1.76
LCE3DQ9BYE3 FAAP24-202ENST00000588258 2298 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
LCE3DQ9BYE3 USP33-203ENST00000370793 4502 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
LCE3DQ9BYE3 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC4.05□□□□□ -1.76
LCE3DQ9BYE3 RBM33-207ENST00000401878 10149 ntAPPRIS P2 TSL 5 BASIC4.05□□□□□ -1.76
LCE3DQ9BYE3 AC073548.1-201ENST00000624088 1882 ntBASIC4.05□□□□□ -1.76
LCE3DQ9BYE3 FAM120B-205ENST00000630384 3721 ntAPPRIS ALT2 TSL 2 BASIC4.05□□□□□ -1.76
LCE3DQ9BYE3 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC4.05□□□□□ -1.76
LCE3DQ9BYE3 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
LCE3DQ9BYE3 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC4.05□□□□□ -1.76
LCE3DQ9BYE3 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC4.05□□□□□ -1.76
LCE3DQ9BYE3 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC4.05□□□□□ -1.76
LCE3DQ9BYE3 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC4.05□□□□□ -1.76
LCE3DQ9BYE3 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC4.05□□□□□ -1.76
LCE3DQ9BYE3 FFAR4-202ENST00000371483 3653 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
LCE3DQ9BYE3 DNAJC3-AS1-201ENST00000499499 2908 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
LCE3DQ9BYE3 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC4.04□□□□□ -1.76
LCE3DQ9BYE3 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
LCE3DQ9BYE3 MED12L-202ENST00000309237 2862 ntAPPRIS ALT2 TSL 2 BASIC4.04□□□□□ -1.76
LCE3DQ9BYE3 MYD88-201ENST00000396334 2850 ntAPPRIS P3 TSL 1 (best) BASIC4.04□□□□□ -1.76
LCE3DQ9BYE3 GPR68-204ENST00000535815 2859 ntAPPRIS P2 TSL 1 (best) BASIC4.04□□□□□ -1.76
LCE3DQ9BYE3 CC2D1A-201ENST00000318003 3581 ntAPPRIS P2 TSL 1 (best) BASIC4.04□□□□□ -1.76
LCE3DQ9BYE3 LRTM1-201ENST00000273286 1423 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
LCE3DQ9BYE3 ADM2-202ENST00000395738 4276 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
LCE3DQ9BYE3 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC4.04□□□□□ -1.76
LCE3DQ9BYE3 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC4.04□□□□□ -1.76
LCE3DQ9BYE3 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC4.04□□□□□ -1.76
LCE3DQ9BYE3 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
LCE3DQ9BYE3 RAP1GAP-211ENST00000495204 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC4.04□□□□□ -1.76
LCE3DQ9BYE3 USP44-203ENST00000537435 2499 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
LCE3DQ9BYE3 AC135012.1-201ENST00000563931 7430 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
LCE3DQ9BYE3 SPG11-201ENST00000261866 7774 ntAPPRIS P3 TSL 1 (best) BASIC4.04□□□□□ -1.76
LCE3DQ9BYE3 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
LCE3DQ9BYE3 VIPR1-202ENST00000433647 3161 ntTSL 2 BASIC4.04□□□□□ -1.76
LCE3DQ9BYE3 CTBP1-AS-201ENST00000625256 3886 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
LCE3DQ9BYE3 HERC2P3-204ENST00000426501 5995 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
LCE3DQ9BYE3 NPR3-201ENST00000265074 7344 ntAPPRIS ALT1 TSL 1 (best) BASIC4.04□□□□□ -1.76
LCE3DQ9BYE3 CARD14-209ENST00000573882 4537 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
LCE3DQ9BYE3 SLC5A8-201ENST00000536262 4178 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
LCE3DQ9BYE3 FBLIM1-203ENST00000375771 3498 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
LCE3DQ9BYE3 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC4.04□□□□□ -1.76
LCE3DQ9BYE3 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
LCE3DQ9BYE3 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC4.04□□□□□ -1.76
LCE3DQ9BYE3 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC4.04□□□□□ -1.76
LCE3DQ9BYE3 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC4.04□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms