Protein–RNA interactions for Protein: Q8NDH2

CCDC168, Coiled-coil domain-containing protein 168, humanhuman

Predictions only

Length 2,452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC168Q8NDH2 NME6-208ENST00000435684 599 ntTSL 2 BASIC12.29□□□□□ -0.44
CCDC168Q8NDH2 RPL18AP8-201ENST00000486071 528 ntBASIC12.29□□□□□ -0.44
CCDC168Q8NDH2 ADM-203ENST00000525063 867 ntAPPRIS P1 TSL 3 BASIC12.29□□□□□ -0.44
CCDC168Q8NDH2 AC017033.1-201ENST00000603720 708 ntTSL 2 BASIC12.29□□□□□ -0.44
CCDC168Q8NDH2 CTSH-218ENST00000615999 972 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
CCDC168Q8NDH2 AC027601.3-201ENST00000622907 509 ntBASIC12.29□□□□□ -0.44
CCDC168Q8NDH2 SNAP29-201ENST00000215730 4287 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CCDC168Q8NDH2 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC12.29□□□□□ -0.44
CCDC168Q8NDH2 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CCDC168Q8NDH2 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
CCDC168Q8NDH2 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC12.29□□□□□ -0.44
CCDC168Q8NDH2 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC12.29□□□□□ -0.44
CCDC168Q8NDH2 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CCDC168Q8NDH2 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CCDC168Q8NDH2 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
CCDC168Q8NDH2 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
CCDC168Q8NDH2 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC12.29□□□□□ -0.44
CCDC168Q8NDH2 TPM4-202ENST00000344824 1417 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
CCDC168Q8NDH2 CEP250-201ENST00000397524 1419 ntTSL 5 BASIC12.29□□□□□ -0.44
CCDC168Q8NDH2 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CCDC168Q8NDH2 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
CCDC168Q8NDH2 JPT1-202ENST00000356033 1519 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
CCDC168Q8NDH2 RBFOX3-203ENST00000580155 1519 ntAPPRIS P2 TSL 2 BASIC12.29□□□□□ -0.44
CCDC168Q8NDH2 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
CCDC168Q8NDH2 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CCDC168Q8NDH2 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
CCDC168Q8NDH2 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
CCDC168Q8NDH2 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CCDC168Q8NDH2 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC12.29□□□□□ -0.44
CCDC168Q8NDH2 PRELID3B-202ENST00000371033 943 ntTSL 2 BASIC12.29□□□□□ -0.44
CCDC168Q8NDH2 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
CCDC168Q8NDH2 EIF4E2-205ENST00000409394 604 ntTSL 3 BASIC12.29□□□□□ -0.44
CCDC168Q8NDH2 AC012506.1-201ENST00000423706 525 ntTSL 4 BASIC12.29□□□□□ -0.44
CCDC168Q8NDH2 AC006372.2-201ENST00000433660 292 ntTSL 3 BASIC12.29□□□□□ -0.44
CCDC168Q8NDH2 OR2R1P-201ENST00000441404 914 ntBASIC12.29□□□□□ -0.44
CCDC168Q8NDH2 AC117945.1-201ENST00000451375 463 ntTSL 3 BASIC12.29□□□□□ -0.44
CCDC168Q8NDH2 RN7SL582P-201ENST00000491078 279 ntBASIC12.29□□□□□ -0.44
CCDC168Q8NDH2 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC12.29□□□□□ -0.44
CCDC168Q8NDH2 AL590235.1-201ENST00000564650 861 ntBASIC12.29□□□□□ -0.44
CCDC168Q8NDH2 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
CCDC168Q8NDH2 RN7SL357P-201ENST00000581065 298 ntBASIC12.29□□□□□ -0.44
CCDC168Q8NDH2 APOC4-202ENST00000592954 615 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CCDC168Q8NDH2 PGPEP1-206ENST00000597431 545 ntTSL 5 BASIC12.29□□□□□ -0.44
CCDC168Q8NDH2 SIGLEC22P-202ENST00000602065 544 ntTSL 4 BASIC12.29□□□□□ -0.44
CCDC168Q8NDH2 FXYD3-204ENST00000603181 758 ntAPPRIS P1 TSL 3 BASIC12.29□□□□□ -0.44
CCDC168Q8NDH2 Metazoa_SRP.75-201ENST00000614439 293 ntBASIC12.29□□□□□ -0.44
CCDC168Q8NDH2 AC129778.1-201ENST00000623957 920 ntTSL 5 BASIC12.29□□□□□ -0.44
CCDC168Q8NDH2 AP000769.1-203ENST00000637245 208 ntBASIC12.29□□□□□ -0.44
CCDC168Q8NDH2 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CCDC168Q8NDH2 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CCDC168Q8NDH2 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
CCDC168Q8NDH2 ILF3-AS1-201ENST00000591501 1983 ntBASIC12.29□□□□□ -0.44
CCDC168Q8NDH2 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
CCDC168Q8NDH2 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
CCDC168Q8NDH2 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
CCDC168Q8NDH2 EMILIN1-201ENST00000380320 3943 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CCDC168Q8NDH2 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CCDC168Q8NDH2 COQ3-201ENST00000254759 1335 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CCDC168Q8NDH2 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
CCDC168Q8NDH2 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
CCDC168Q8NDH2 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
CCDC168Q8NDH2 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CCDC168Q8NDH2 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
CCDC168Q8NDH2 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC12.28□□□□□ -0.44
CCDC168Q8NDH2 SSBP1-201ENST00000265304 687 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CCDC168Q8NDH2 AQP7-202ENST00000377425 1068 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
CCDC168Q8NDH2 CST1-202ENST00000398402 655 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
CCDC168Q8NDH2 GSTT2B-202ENST00000404172 819 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
CCDC168Q8NDH2 AC112487.1-201ENST00000498032 1097 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
CCDC168Q8NDH2 FOXN3-AS2-201ENST00000554071 1262 ntBASIC12.28□□□□□ -0.44
CCDC168Q8NDH2 AC068831.5-201ENST00000557387 328 ntBASIC12.28□□□□□ -0.44
CCDC168Q8NDH2 ABHD17AP9-201ENST00000561925 548 ntBASIC12.28□□□□□ -0.44
CCDC168Q8NDH2 AC007952.4-201ENST00000573866 637 ntBASIC12.28□□□□□ -0.44
CCDC168Q8NDH2 AC145207.3-201ENST00000576784 529 ntTSL 5 BASIC12.28□□□□□ -0.44
CCDC168Q8NDH2 AC020934.2-201ENST00000592400 456 ntTSL 3 BASIC12.28□□□□□ -0.44
CCDC168Q8NDH2 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC12.28□□□□□ -0.44
CCDC168Q8NDH2 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CCDC168Q8NDH2 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC12.28□□□□□ -0.44
CCDC168Q8NDH2 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC12.28□□□□□ -0.44
CCDC168Q8NDH2 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC12.28□□□□□ -0.44
CCDC168Q8NDH2 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CCDC168Q8NDH2 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
CCDC168Q8NDH2 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
CCDC168Q8NDH2 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
CCDC168Q8NDH2 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CCDC168Q8NDH2 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CCDC168Q8NDH2 ATAT1-206ENST00000376485 1476 ntAPPRIS ALT1 TSL 5 BASIC12.28□□□□□ -0.44
CCDC168Q8NDH2 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CCDC168Q8NDH2 REXO1L4P-201ENST00000605109 1937 ntBASIC12.28□□□□□ -0.44
CCDC168Q8NDH2 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
CCDC168Q8NDH2 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CCDC168Q8NDH2 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CCDC168Q8NDH2 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
CCDC168Q8NDH2 FTCDNL1-203ENST00000420922 772 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
CCDC168Q8NDH2 CSNK1G2P1-201ENST00000442675 955 ntBASIC12.28□□□□□ -0.44
CCDC168Q8NDH2 ANAPC15-204ENST00000535234 848 ntAPPRIS P3 TSL 2 BASIC12.28□□□□□ -0.44
CCDC168Q8NDH2 DUSP22-213ENST00000605035 1231 ntTSL 2 BASIC12.28□□□□□ -0.44
CCDC168Q8NDH2 AC010976.2-201ENST00000609697 852 ntBASIC12.28□□□□□ -0.44
CCDC168Q8NDH2 APOBEC3H-207ENST00000613996 465 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
CCDC168Q8NDH2 PSME2-217ENST00000615264 874 ntTSL 5 BASIC12.28□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 78.1 ms