Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
TPM4P67936 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
TPM4P67936 RGS8-204ENST00000483095 1432 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.27
TPM4P67936 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC16.77■□□□□ 0.27
TPM4P67936 PRR34-201ENST00000396008 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
TPM4P67936 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC16.77■□□□□ 0.27
TPM4P67936 PPP6R2-202ENST00000359139 4035 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.27
TPM4P67936 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
TPM4P67936 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
TPM4P67936 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
TPM4P67936 TCOF1-207ENST00000504761 4467 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
TPM4P67936 ADCY7-208ENST00000566433 2535 ntTSL 5 BASIC16.76■□□□□ 0.27
TPM4P67936 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC16.76■□□□□ 0.27
TPM4P67936 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
TPM4P67936 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
TPM4P67936 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
TPM4P67936 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC16.76■□□□□ 0.27
TPM4P67936 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC16.76■□□□□ 0.27
TPM4P67936 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
TPM4P67936 TMEM245-201ENST00000374586 7980 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TPM4P67936 MON1B-201ENST00000248248 6091 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TPM4P67936 ZNF772-204ENST00000427512 5130 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
TPM4P67936 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
TPM4P67936 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC16.76■□□□□ 0.27
TPM4P67936 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TPM4P67936 SSTR3-201ENST00000610913 4100 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TPM4P67936 INE2-201ENST00000630399 1874 ntBASIC16.76■□□□□ 0.27
TPM4P67936 HMGA2-204ENST00000403681 4473 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
TPM4P67936 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC16.76■□□□□ 0.27
TPM4P67936 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
TPM4P67936 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
TPM4P67936 NAPEPLD-201ENST00000341533 4972 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TPM4P67936 DUSP28-202ENST00000405954 3461 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TPM4P67936 NXPH1-201ENST00000405863 2921 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TPM4P67936 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
TPM4P67936 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TPM4P67936 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
TPM4P67936 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC16.76■□□□□ 0.27
TPM4P67936 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC16.76■□□□□ 0.27
TPM4P67936 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
TPM4P67936 SUN1-204ENST00000403868 978 ntTSL 2 BASIC16.76■□□□□ 0.27
TPM4P67936 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC16.76■□□□□ 0.27
TPM4P67936 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC16.76■□□□□ 0.27
TPM4P67936 DNAJB3-201ENST00000446806 729 ntBASIC16.76■□□□□ 0.27
TPM4P67936 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC16.76■□□□□ 0.27
TPM4P67936 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
TPM4P67936 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC16.76■□□□□ 0.27
TPM4P67936 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC16.76■□□□□ 0.27
TPM4P67936 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC16.76■□□□□ 0.27
TPM4P67936 TIMM17BP1-201ENST00000545713 516 ntBASIC16.76■□□□□ 0.27
TPM4P67936 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
TPM4P67936 AP001059.3-201ENST00000619053 235 ntBASIC16.76■□□□□ 0.27
TPM4P67936 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC16.76■□□□□ 0.27
TPM4P67936 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC16.76■□□□□ 0.27
TPM4P67936 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
TPM4P67936 MAP3K4-203ENST00000366920 5445 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
TPM4P67936 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TPM4P67936 LCOR-203ENST00000371097 4852 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
TPM4P67936 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
TPM4P67936 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC16.76■□□□□ 0.27
TPM4P67936 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TPM4P67936 MROH2A-208ENST00000610772 5324 ntAPPRIS P2 TSL 5 BASIC16.76■□□□□ 0.27
TPM4P67936 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC16.76■□□□□ 0.27
TPM4P67936 GRIK4-202ENST00000438375 4214 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TPM4P67936 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC16.76■□□□□ 0.27
TPM4P67936 SIRPA-202ENST00000358771 3996 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
TPM4P67936 NR1H3-221ENST00000481889 1704 ntTSL 5 BASIC16.76■□□□□ 0.27
TPM4P67936 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC16.76■□□□□ 0.27
TPM4P67936 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
TPM4P67936 ZDHHC15-201ENST00000373367 5796 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
TPM4P67936 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
TPM4P67936 PKP1-203ENST00000367324 5384 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TPM4P67936 SON-203ENST00000381679 7860 ntTSL 5 BASIC16.75■□□□□ 0.27
TPM4P67936 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
TPM4P67936 CICP8-201ENST00000455800 2813 ntBASIC16.75■□□□□ 0.27
TPM4P67936 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC16.75■□□□□ 0.27
TPM4P67936 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
TPM4P67936 UBE3A-228ENST00000638155 9131 ntAPPRIS P3 TSL 5 BASIC16.75■□□□□ 0.27
TPM4P67936 API5-203ENST00000455725 2257 ntTSL 2 BASIC16.75■□□□□ 0.27
TPM4P67936 ZFYVE28-211ENST00000515312 3247 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
TPM4P67936 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC16.75■□□□□ 0.27
TPM4P67936 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TPM4P67936 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TPM4P67936 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC16.75■□□□□ 0.27
TPM4P67936 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
TPM4P67936 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
TPM4P67936 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC16.75■□□□□ 0.27
TPM4P67936 RAD18-204ENST00000418463 563 ntTSL 4 BASIC16.75■□□□□ 0.27
TPM4P67936 RAD18-205ENST00000421052 582 ntTSL 3 BASIC16.75■□□□□ 0.27
TPM4P67936 AC023141.5-201ENST00000458585 616 ntBASIC16.75■□□□□ 0.27
TPM4P67936 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC16.75■□□□□ 0.27
TPM4P67936 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
TPM4P67936 PGAM5P1-201ENST00000518923 814 ntBASIC16.75■□□□□ 0.27
TPM4P67936 AL109936.8-201ENST00000641772 604 ntBASIC16.75■□□□□ 0.27
TPM4P67936 AFF1-201ENST00000307808 9390 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
TPM4P67936 ADGRG6-202ENST00000296932 6849 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
TPM4P67936 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TPM4P67936 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TPM4P67936 SNAP91-215ENST00000521743 4263 ntAPPRIS P2 TSL 5 BASIC16.75■□□□□ 0.27
TPM4P67936 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 127 ms