Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 GPER1-207ENST00000619052 571 ntTSL 2 BASIC14.23□□□□□ -0.13
NR1H2P55055 RAB34-223ENST00000636154 730 ntTSL 2 BASIC14.23□□□□□ -0.13
NR1H2P55055 ZNF395-201ENST00000344423 4808 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
NR1H2P55055 SLC35C2-203ENST00000372227 2505 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
NR1H2P55055 LINC00863-201ENST00000439559 3287 ntTSL 5 BASIC14.23□□□□□ -0.13
NR1H2P55055 AC016397.2-201ENST00000624848 1985 ntBASIC14.23□□□□□ -0.13
NR1H2P55055 AC138969.3-201ENST00000546612 1459 ntBASIC14.23□□□□□ -0.13
NR1H2P55055 AC138932.2-201ENST00000548268 1459 ntBASIC14.23□□□□□ -0.13
NR1H2P55055 AC126755.4-201ENST00000549796 1459 ntBASIC14.23□□□□□ -0.13
NR1H2P55055 NTM-202ENST00000374786 3190 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
NR1H2P55055 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
NR1H2P55055 PATL2-207ENST00000560775 1913 ntAPPRIS P3 TSL 5 BASIC14.23□□□□□ -0.13
NR1H2P55055 PPP4R3B-205ENST00000616288 4310 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
NR1H2P55055 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
NR1H2P55055 NR4A2-209ENST00000426264 2642 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
NR1H2P55055 MSRB3-202ENST00000355192 4289 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
NR1H2P55055 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC14.23□□□□□ -0.13
NR1H2P55055 AC100757.3-201ENST00000622361 1406 ntBASIC14.23□□□□□ -0.13
NR1H2P55055 AL359643.2-201ENST00000606227 3273 ntTSL 2 BASIC14.23□□□□□ -0.13
NR1H2P55055 TARDBP-201ENST00000240185 5367 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
NR1H2P55055 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
NR1H2P55055 FLNC-201ENST00000325888 9188 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
NR1H2P55055 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
NR1H2P55055 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
NR1H2P55055 PCDHB16-201ENST00000609684 5001 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
NR1H2P55055 ARHGEF37-201ENST00000333677 4968 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
NR1H2P55055 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC14.22□□□□□ -0.13
NR1H2P55055 BNIP3P1-202ENST00000550043 1585 ntBASIC14.22□□□□□ -0.13
NR1H2P55055 RAVER1-206ENST00000611074 3586 ntAPPRIS P2 TSL 5 BASIC14.22□□□□□ -0.13
NR1H2P55055 POM121-201ENST00000358357 5320 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
NR1H2P55055 KIAA0319-204ENST00000537886 6622 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
NR1H2P55055 AC004241.5-201ENST00000623870 2448 ntBASIC14.22□□□□□ -0.13
NR1H2P55055 AP001062.1-201ENST00000448927 4354 ntTSL 2 BASIC14.22□□□□□ -0.13
NR1H2P55055 KDM2B-202ENST00000377071 4595 ntAPPRIS P4 TSL 1 (best) BASIC14.22□□□□□ -0.13
NR1H2P55055 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
NR1H2P55055 HMOX2-216ENST00000613539 1703 ntTSL 5 BASIC14.22□□□□□ -0.13
NR1H2P55055 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
NR1H2P55055 PRDM16-206ENST00000511072 4282 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
NR1H2P55055 MOGAT3-201ENST00000223114 2132 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
NR1H2P55055 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
NR1H2P55055 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
NR1H2P55055 BAK1-202ENST00000374467 2136 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
NR1H2P55055 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC14.22□□□□□ -0.13
NR1H2P55055 DPP3-209ENST00000531863 2974 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
NR1H2P55055 MAX-210ENST00000555419 765 ntTSL 5 BASIC14.22□□□□□ -0.13
NR1H2P55055 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC14.22□□□□□ -0.13
NR1H2P55055 B3GNT5-202ENST00000460419 3368 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
NR1H2P55055 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
NR1H2P55055 ZBED6CL-201ENST00000343855 2933 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
NR1H2P55055 CD99L2-208ENST00000613030 3742 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
NR1H2P55055 SSTR3-201ENST00000610913 4100 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
NR1H2P55055 ATG14-201ENST00000247178 4742 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
NR1H2P55055 MCHR1-201ENST00000249016 2851 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
NR1H2P55055 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
NR1H2P55055 CCDC57-203ENST00000392343 2896 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
NR1H2P55055 AC098936.1-201ENST00000442318 2885 ntTSL 2 BASIC14.22□□□□□ -0.13
NR1H2P55055 ZFP28-204ENST00000591844 3475 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
NR1H2P55055 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
NR1H2P55055 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
NR1H2P55055 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
NR1H2P55055 MPZ-204ENST00000491222 1824 ntTSL 2 BASIC14.22□□□□□ -0.13
NR1H2P55055 AMT-221ENST00000538581 2038 ntTSL 2 BASIC14.22□□□□□ -0.13
NR1H2P55055 LDLRAD2-201ENST00000344642 4012 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
NR1H2P55055 GPRASP1-203ENST00000444152 5809 ntAPPRIS P1 TSL 3 BASIC14.22□□□□□ -0.13
NR1H2P55055 CABLES2-201ENST00000279101 3785 ntAPPRIS P2 TSL 5 BASIC14.22□□□□□ -0.13
NR1H2P55055 VPS9D1-202ENST00000561976 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
NR1H2P55055 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC14.22□□□□□ -0.13
NR1H2P55055 CETN4P-206ENST00000642099 2168 ntBASIC14.22□□□□□ -0.13
NR1H2P55055 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
NR1H2P55055 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
NR1H2P55055 GRM1-203ENST00000361719 6754 ntAPPRIS P3 TSL 5 BASIC14.21□□□□□ -0.13
NR1H2P55055 GPT2-201ENST00000340124 3984 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
NR1H2P55055 TGFBRAP1-201ENST00000258449 2827 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
NR1H2P55055 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
NR1H2P55055 MAP2K7-203ENST00000397983 3396 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
NR1H2P55055 LIMD2-201ENST00000259006 3193 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
NR1H2P55055 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
NR1H2P55055 CDK11B-203ENST00000341832 2998 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
NR1H2P55055 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC14.21□□□□□ -0.13
NR1H2P55055 SNPH-201ENST00000381867 5533 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
NR1H2P55055 AC134312.1-201ENST00000378417 3468 ntTSL 2 BASIC14.21□□□□□ -0.13
NR1H2P55055 RPL15-213ENST00000611050 2363 ntAPPRIS P1 TSL 4 BASIC14.21□□□□□ -0.13
NR1H2P55055 AC068075.1-201ENST00000519714 1832 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
NR1H2P55055 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
NR1H2P55055 HNRNPA3P1-201ENST00000401429 1139 ntBASIC14.21□□□□□ -0.13
NR1H2P55055 RAC2-204ENST00000406508 893 ntTSL 5 BASIC14.21□□□□□ -0.13
NR1H2P55055 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
NR1H2P55055 HNRNPA3P5-201ENST00000455201 833 ntBASIC14.21□□□□□ -0.13
NR1H2P55055 AC004890.2-204ENST00000481968 304 ntBASIC14.21□□□□□ -0.13
NR1H2P55055 RNA5SP410-201ENST00000516285 106 ntBASIC14.21□□□□□ -0.13
NR1H2P55055 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
NR1H2P55055 LITAF-210ENST00000571976 548 ntTSL 2 BASIC14.21□□□□□ -0.13
NR1H2P55055 LITAF-214ENST00000574703 486 ntTSL 2 BASIC14.21□□□□□ -0.13
NR1H2P55055 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
NR1H2P55055 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC14.21□□□□□ -0.13
NR1H2P55055 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC14.21□□□□□ -0.13
NR1H2P55055 AC012645.4-201ENST00000610691 1061 ntBASIC14.21□□□□□ -0.13
NR1H2P55055 SPDYE12P-201ENST00000618416 771 ntBASIC14.21□□□□□ -0.13
NR1H2P55055 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
NR1H2P55055 AL590560.3-201ENST00000623350 461 ntBASIC14.21□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 55.2 ms