Protein–RNA interactions for Protein: P29508

SERPINB3, Serpin B3, humanhuman

Predictions only

Length 390 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SERPINB3P29508 NRIP3-201ENST00000309166 3809 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SERPINB3P29508 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SERPINB3P29508 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
SERPINB3P29508 CHD1-212ENST00000614616 8095 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
SERPINB3P29508 KRT75-201ENST00000252245 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SERPINB3P29508 CMTR2-201ENST00000338099 4869 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SERPINB3P29508 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC14.9□□□□□ -0.02
SERPINB3P29508 PLA2G3-201ENST00000215885 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SERPINB3P29508 FAM219A-201ENST00000297620 3588 ntAPPRIS P3 TSL 2 BASIC14.9□□□□□ -0.02
SERPINB3P29508 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC14.9□□□□□ -0.02
SERPINB3P29508 SLC27A4-201ENST00000300456 3028 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SERPINB3P29508 SREBF1-202ENST00000355815 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
SERPINB3P29508 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC14.9□□□□□ -0.02
SERPINB3P29508 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SERPINB3P29508 AP4B1-201ENST00000256658 2742 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SERPINB3P29508 BMT2-201ENST00000297145 3981 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SERPINB3P29508 ABLIM2-213ENST00000514025 2974 ntTSL 2 BASIC14.9□□□□□ -0.02
SERPINB3P29508 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
SERPINB3P29508 IKZF1-218ENST00000615491 5637 ntTSL 5 BASIC14.9□□□□□ -0.02
SERPINB3P29508 MED12L-202ENST00000309237 2862 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
SERPINB3P29508 MYD88-201ENST00000396334 2850 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
SERPINB3P29508 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
SERPINB3P29508 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
SERPINB3P29508 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
SERPINB3P29508 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SERPINB3P29508 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
SERPINB3P29508 SSTR1-201ENST00000267377 4295 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
SERPINB3P29508 MIR770-201ENST00000390219 98 ntBASIC14.9□□□□□ -0.02
SERPINB3P29508 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC14.9□□□□□ -0.02
SERPINB3P29508 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC14.9□□□□□ -0.02
SERPINB3P29508 AC055876.3-201ENST00000431496 288 ntBASIC14.9□□□□□ -0.02
SERPINB3P29508 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC14.9□□□□□ -0.02
SERPINB3P29508 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC14.9□□□□□ -0.02
SERPINB3P29508 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
SERPINB3P29508 KRT18P43-201ENST00000469825 1281 ntBASIC14.9□□□□□ -0.02
SERPINB3P29508 HLA-V-204ENST00000476601 1289 ntBASIC14.9□□□□□ -0.02
SERPINB3P29508 RN7SL618P-201ENST00000477850 296 ntBASIC14.9□□□□□ -0.02
SERPINB3P29508 IGHV3-42-201ENST00000520410 361 ntBASIC14.9□□□□□ -0.02
SERPINB3P29508 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC14.9□□□□□ -0.02
SERPINB3P29508 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
SERPINB3P29508 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SERPINB3P29508 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC14.9□□□□□ -0.02
SERPINB3P29508 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC14.9□□□□□ -0.02
SERPINB3P29508 AC138649.4-201ENST00000612222 287 ntBASIC14.9□□□□□ -0.02
SERPINB3P29508 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC14.9□□□□□ -0.02
SERPINB3P29508 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC14.9□□□□□ -0.02
SERPINB3P29508 AL645728.2-202ENST00000641679 227 ntBASIC14.9□□□□□ -0.02
SERPINB3P29508 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
SERPINB3P29508 ARHGAP10-201ENST00000336498 3299 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SERPINB3P29508 CHFR-205ENST00000450056 3250 ntTSL 2 BASIC14.9□□□□□ -0.02
SERPINB3P29508 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
SERPINB3P29508 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC14.9□□□□□ -0.02
SERPINB3P29508 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SERPINB3P29508 MED22-209ENST00000610888 3867 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SERPINB3P29508 ATCAY-201ENST00000450849 5070 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SERPINB3P29508 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SERPINB3P29508 CBFA2T3-202ENST00000327483 4033 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
SERPINB3P29508 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
SERPINB3P29508 SF1-201ENST00000227503 2850 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
SERPINB3P29508 DAGLB-201ENST00000297056 2897 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SERPINB3P29508 LINC00887-202ENST00000414120 2880 ntTSL 3 BASIC14.9□□□□□ -0.02
SERPINB3P29508 GDPD2-204ENST00000536730 2171 ntTSL 2 BASIC14.9□□□□□ -0.02
SERPINB3P29508 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC14.9□□□□□ -0.02
SERPINB3P29508 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC14.89□□□□□ -0.03
SERPINB3P29508 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
SERPINB3P29508 AC026790.1-201ENST00000399760 2941 ntTSL 2 BASIC14.89□□□□□ -0.03
SERPINB3P29508 CPT1B-202ENST00000360719 2319 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
SERPINB3P29508 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
SERPINB3P29508 KIAA0319-204ENST00000537886 6622 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
SERPINB3P29508 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
SERPINB3P29508 USP44-203ENST00000537435 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SERPINB3P29508 ATRIP-204ENST00000412052 2721 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
SERPINB3P29508 SYBU-235ENST00000533895 3244 ntAPPRIS P4 TSL 1 (best) BASIC14.89□□□□□ -0.03
SERPINB3P29508 ADAM33-201ENST00000350009 3480 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
SERPINB3P29508 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC14.89□□□□□ -0.03
SERPINB3P29508 CSNK1A1P1-201ENST00000430593 2147 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
SERPINB3P29508 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
SERPINB3P29508 TPM3P9-201ENST00000424846 2920 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
SERPINB3P29508 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
SERPINB3P29508 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SERPINB3P29508 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
SERPINB3P29508 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC14.89□□□□□ -0.03
SERPINB3P29508 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC14.89□□□□□ -0.03
SERPINB3P29508 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC14.89□□□□□ -0.03
SERPINB3P29508 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC14.89□□□□□ -0.03
SERPINB3P29508 RNA5SP421-201ENST00000516864 134 ntBASIC14.89□□□□□ -0.03
SERPINB3P29508 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC14.89□□□□□ -0.03
SERPINB3P29508 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC14.89□□□□□ -0.03
SERPINB3P29508 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC14.89□□□□□ -0.03
SERPINB3P29508 AC044860.1-202ENST00000559481 777 ntBASIC14.89□□□□□ -0.03
SERPINB3P29508 DUT-210ENST00000559935 569 ntTSL 3 BASIC14.89□□□□□ -0.03
SERPINB3P29508 AC074044.1-201ENST00000609673 707 ntBASIC14.89□□□□□ -0.03
SERPINB3P29508 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
SERPINB3P29508 AC073592.8-201ENST00000624126 511 ntBASIC14.89□□□□□ -0.03
SERPINB3P29508 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
SERPINB3P29508 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
SERPINB3P29508 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC14.89□□□□□ -0.03
SERPINB3P29508 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
SERPINB3P29508 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
SERPINB3P29508 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms