Protein–RNA interactions for Protein: O60890

OPHN1, Oligophrenin-1, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OPHN1O60890 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC15.64■□□□□ 0.09
OPHN1O60890 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC15.64■□□□□ 0.09
OPHN1O60890 DRD5P1-201ENST00000456605 1438 ntBASIC15.64■□□□□ 0.09
OPHN1O60890 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC15.64■□□□□ 0.09
OPHN1O60890 AC108725.1-201ENST00000495472 409 ntBASIC15.64■□□□□ 0.09
OPHN1O60890 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC15.64■□□□□ 0.09
OPHN1O60890 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC15.64■□□□□ 0.09
OPHN1O60890 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC15.64■□□□□ 0.09
OPHN1O60890 AC068587.3-201ENST00000526613 355 ntBASIC15.64■□□□□ 0.09
OPHN1O60890 ENPP7P5-201ENST00000541031 1031 ntBASIC15.64■□□□□ 0.09
OPHN1O60890 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC15.64■□□□□ 0.09
OPHN1O60890 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
OPHN1O60890 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC15.64■□□□□ 0.09
OPHN1O60890 AC232323.1-201ENST00000540724 2099 ntBASIC15.64■□□□□ 0.09
OPHN1O60890 REXO1L5P-201ENST00000622260 2098 ntBASIC15.64■□□□□ 0.09
OPHN1O60890 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
OPHN1O60890 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
OPHN1O60890 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC15.64■□□□□ 0.09
OPHN1O60890 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC15.63■□□□□ 0.09
OPHN1O60890 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC15.63■□□□□ 0.09
OPHN1O60890 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
OPHN1O60890 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
OPHN1O60890 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
OPHN1O60890 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
OPHN1O60890 LILRP1-201ENST00000444199 1370 ntBASIC15.63■□□□□ 0.09
OPHN1O60890 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
OPHN1O60890 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
OPHN1O60890 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
OPHN1O60890 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
OPHN1O60890 OR2C3-201ENST00000366487 8467 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
OPHN1O60890 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC15.63■□□□□ 0.09
OPHN1O60890 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC15.63■□□□□ 0.09
OPHN1O60890 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
OPHN1O60890 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
OPHN1O60890 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC15.63■□□□□ 0.09
OPHN1O60890 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
OPHN1O60890 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC15.63■□□□□ 0.09
OPHN1O60890 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
OPHN1O60890 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC15.63■□□□□ 0.09
OPHN1O60890 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
OPHN1O60890 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
OPHN1O60890 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC15.63■□□□□ 0.09
OPHN1O60890 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC15.63■□□□□ 0.09
OPHN1O60890 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC15.63■□□□□ 0.09
OPHN1O60890 YBX1P6-201ENST00000442962 1002 ntBASIC15.63■□□□□ 0.09
OPHN1O60890 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
OPHN1O60890 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
OPHN1O60890 TPI1-206ENST00000488464 791 ntTSL 5 BASIC15.63■□□□□ 0.09
OPHN1O60890 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC15.63■□□□□ 0.09
OPHN1O60890 AC026410.3-201ENST00000514280 936 ntBASIC15.63■□□□□ 0.09
OPHN1O60890 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC15.63■□□□□ 0.09
OPHN1O60890 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC15.63■□□□□ 0.09
OPHN1O60890 AL359711.2-201ENST00000563105 872 ntBASIC15.63■□□□□ 0.09
OPHN1O60890 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
OPHN1O60890 AC243960.2-201ENST00000600996 747 ntBASIC15.63■□□□□ 0.09
OPHN1O60890 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC15.63■□□□□ 0.09
OPHN1O60890 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
OPHN1O60890 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
OPHN1O60890 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
OPHN1O60890 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
OPHN1O60890 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
OPHN1O60890 C8orf49-201ENST00000525043 1968 ntBASIC15.63■□□□□ 0.09
OPHN1O60890 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
OPHN1O60890 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
OPHN1O60890 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
OPHN1O60890 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
OPHN1O60890 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC15.63■□□□□ 0.09
OPHN1O60890 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC15.63■□□□□ 0.09
OPHN1O60890 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
OPHN1O60890 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
OPHN1O60890 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
OPHN1O60890 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
OPHN1O60890 MCHR2-202ENST00000369212 1311 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
OPHN1O60890 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
OPHN1O60890 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
OPHN1O60890 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
OPHN1O60890 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
OPHN1O60890 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC15.63■□□□□ 0.09
OPHN1O60890 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC15.63■□□□□ 0.09
OPHN1O60890 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC15.62■□□□□ 0.09
OPHN1O60890 HNRNPA1P48-201ENST00000562726 1377 ntBASIC15.62■□□□□ 0.09
OPHN1O60890 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
OPHN1O60890 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC15.62■□□□□ 0.09
OPHN1O60890 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
OPHN1O60890 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
OPHN1O60890 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
OPHN1O60890 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC15.62■□□□□ 0.09
OPHN1O60890 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
OPHN1O60890 LMX1B-202ENST00000373474 5797 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
OPHN1O60890 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC15.62■□□□□ 0.09
OPHN1O60890 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC15.62■□□□□ 0.09
OPHN1O60890 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
OPHN1O60890 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
OPHN1O60890 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
OPHN1O60890 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC15.62■□□□□ 0.09
OPHN1O60890 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
OPHN1O60890 POLD4-201ENST00000312419 918 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
OPHN1O60890 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
OPHN1O60890 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC15.62■□□□□ 0.09
OPHN1O60890 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC15.62■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms