Protein–RNA interactions for Protein: A7MD48

SRRM4, Serine/arginine repetitive matrix protein 4, humanhuman

Known RBP Predictions only

Length 611 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4A7MD48 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
SRRM4A7MD48 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC12.02□□□□□ -0.49
SRRM4A7MD48 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
SRRM4A7MD48 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
SRRM4A7MD48 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC12.02□□□□□ -0.49
SRRM4A7MD48 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
SRRM4A7MD48 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC12.02□□□□□ -0.49
SRRM4A7MD48 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC12.02□□□□□ -0.49
SRRM4A7MD48 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
SRRM4A7MD48 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
SRRM4A7MD48 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC12.02□□□□□ -0.49
SRRM4A7MD48 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
SRRM4A7MD48 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
SRRM4A7MD48 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
SRRM4A7MD48 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
SRRM4A7MD48 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
SRRM4A7MD48 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
SRRM4A7MD48 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
SRRM4A7MD48 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
SRRM4A7MD48 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
SRRM4A7MD48 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
SRRM4A7MD48 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC12.01□□□□□ -0.49
SRRM4A7MD48 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
SRRM4A7MD48 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
SRRM4A7MD48 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
SRRM4A7MD48 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
SRRM4A7MD48 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
SRRM4A7MD48 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
SRRM4A7MD48 SBF1P1-201ENST00000444527 5631 ntBASIC12.01□□□□□ -0.49
SRRM4A7MD48 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
SRRM4A7MD48 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
SRRM4A7MD48 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
SRRM4A7MD48 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
SRRM4A7MD48 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
SRRM4A7MD48 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC12.01□□□□□ -0.49
SRRM4A7MD48 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
SRRM4A7MD48 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC12.01□□□□□ -0.49
SRRM4A7MD48 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
SRRM4A7MD48 TLE1P1-201ENST00000422965 589 ntBASIC12.01□□□□□ -0.49
SRRM4A7MD48 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
SRRM4A7MD48 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
SRRM4A7MD48 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
SRRM4A7MD48 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC12.01□□□□□ -0.49
SRRM4A7MD48 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC12.01□□□□□ -0.49
SRRM4A7MD48 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC12.01□□□□□ -0.49
SRRM4A7MD48 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC12.01□□□□□ -0.49
SRRM4A7MD48 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC12.01□□□□□ -0.49
SRRM4A7MD48 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
SRRM4A7MD48 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC12.01□□□□□ -0.49
SRRM4A7MD48 AC005840.4-201ENST00000541242 2494 ntBASIC12.01□□□□□ -0.49
SRRM4A7MD48 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC12.01□□□□□ -0.49
SRRM4A7MD48 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
SRRM4A7MD48 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
SRRM4A7MD48 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
SRRM4A7MD48 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC12.01□□□□□ -0.49
SRRM4A7MD48 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC12.01□□□□□ -0.49
SRRM4A7MD48 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC12.01□□□□□ -0.49
SRRM4A7MD48 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
SRRM4A7MD48 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
SRRM4A7MD48 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
SRRM4A7MD48 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
SRRM4A7MD48 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
SRRM4A7MD48 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
SRRM4A7MD48 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
SRRM4A7MD48 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC12□□□□□ -0.49
SRRM4A7MD48 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC12□□□□□ -0.49
SRRM4A7MD48 CNTNAP3P2-201ENST00000617175 3861 ntBASIC12□□□□□ -0.49
SRRM4A7MD48 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
SRRM4A7MD48 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
SRRM4A7MD48 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC12□□□□□ -0.49
SRRM4A7MD48 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
SRRM4A7MD48 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC12□□□□□ -0.49
SRRM4A7MD48 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
SRRM4A7MD48 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC12□□□□□ -0.49
SRRM4A7MD48 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
SRRM4A7MD48 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
SRRM4A7MD48 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
SRRM4A7MD48 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
SRRM4A7MD48 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC12□□□□□ -0.49
SRRM4A7MD48 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC12□□□□□ -0.49
SRRM4A7MD48 SERF2-209ENST00000409646 559 ntTSL 4 BASIC12□□□□□ -0.49
SRRM4A7MD48 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
SRRM4A7MD48 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC12□□□□□ -0.49
SRRM4A7MD48 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
SRRM4A7MD48 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC12□□□□□ -0.49
SRRM4A7MD48 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC12□□□□□ -0.49
SRRM4A7MD48 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC12□□□□□ -0.49
SRRM4A7MD48 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC12□□□□□ -0.49
SRRM4A7MD48 AC009486.1-201ENST00000569860 813 ntBASIC12□□□□□ -0.49
SRRM4A7MD48 YTHDF3-AS1-201ENST00000603538 718 ntBASIC12□□□□□ -0.49
SRRM4A7MD48 AL355385.1-201ENST00000606123 409 ntBASIC12□□□□□ -0.49
SRRM4A7MD48 RPSAP52-203ENST00000622976 1023 ntBASIC12□□□□□ -0.49
SRRM4A7MD48 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC12□□□□□ -0.49
SRRM4A7MD48 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
SRRM4A7MD48 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
SRRM4A7MD48 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
SRRM4A7MD48 AL138725.1-201ENST00000407347 1314 ntBASIC12□□□□□ -0.49
SRRM4A7MD48 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC12□□□□□ -0.49
SRRM4A7MD48 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC12□□□□□ -0.49
SRRM4A7MD48 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 60.2 ms