Protein–RNA interactions for Protein: Q9Y6C5

PTCH2, Protein patched homolog 2, humanhuman

Predictions only

Length 1,203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH2Q9Y6C5 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
PTCH2Q9Y6C5 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
PTCH2Q9Y6C5 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC16.55■□□□□ 0.24
PTCH2Q9Y6C5 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PTCH2Q9Y6C5 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
PTCH2Q9Y6C5 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PTCH2Q9Y6C5 VAMP2-202ENST00000404970 1479 ntTSL 2 BASIC16.54■□□□□ 0.24
PTCH2Q9Y6C5 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PTCH2Q9Y6C5 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
PTCH2Q9Y6C5 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
PTCH2Q9Y6C5 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PTCH2Q9Y6C5 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PTCH2Q9Y6C5 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PTCH2Q9Y6C5 ENPP7P8-202ENST00000527856 1345 ntBASIC16.54■□□□□ 0.24
PTCH2Q9Y6C5 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PTCH2Q9Y6C5 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PTCH2Q9Y6C5 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
PTCH2Q9Y6C5 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
PTCH2Q9Y6C5 TMSB15A-201ENST00000289373 685 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PTCH2Q9Y6C5 PSMB4-201ENST00000290541 964 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PTCH2Q9Y6C5 HFE-201ENST00000309234 1158 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
PTCH2Q9Y6C5 UQCC2-201ENST00000374214 432 ntTSL 5 BASIC16.54■□□□□ 0.24
PTCH2Q9Y6C5 ADARB2-AS1-201ENST00000381301 625 ntTSL 2 BASIC16.54■□□□□ 0.24
PTCH2Q9Y6C5 CACNG7-202ENST00000391766 631 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PTCH2Q9Y6C5 AC108734.2-201ENST00000420887 1069 ntBASIC16.54■□□□□ 0.24
PTCH2Q9Y6C5 NAA60-205ENST00000424546 1149 ntTSL 2 BASIC16.54■□□□□ 0.24
PTCH2Q9Y6C5 CSNK1G2P1-201ENST00000442675 955 ntBASIC16.54■□□□□ 0.24
PTCH2Q9Y6C5 AL121845.1-201ENST00000447343 464 ntTSL 2 BASIC16.54■□□□□ 0.24
PTCH2Q9Y6C5 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PTCH2Q9Y6C5 TAGLN3-203ENST00000455401 1164 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PTCH2Q9Y6C5 RPL18AP8-201ENST00000486071 528 ntBASIC16.54■□□□□ 0.24
PTCH2Q9Y6C5 CISD2-202ENST00000503643 808 ntTSL 2 BASIC16.54■□□□□ 0.24
PTCH2Q9Y6C5 AC105219.2-201ENST00000527908 299 ntTSL 4 BASIC16.54■□□□□ 0.24
PTCH2Q9Y6C5 OR5BD1P-201ENST00000532527 817 ntBASIC16.54■□□□□ 0.24
PTCH2Q9Y6C5 SNHG15-205ENST00000580458 710 ntTSL 2 BASIC16.54■□□□□ 0.24
PTCH2Q9Y6C5 MCEMP1-202ENST00000597445 763 ntAPPRIS ALT2 TSL 3 BASIC16.54■□□□□ 0.24
PTCH2Q9Y6C5 DUSP22-213ENST00000605035 1231 ntTSL 2 BASIC16.54■□□□□ 0.24
PTCH2Q9Y6C5 AL139384.1-201ENST00000612143 3047 ntBASIC16.54■□□□□ 0.24
PTCH2Q9Y6C5 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC16.54■□□□□ 0.24
PTCH2Q9Y6C5 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC16.54■□□□□ 0.24
PTCH2Q9Y6C5 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
PTCH2Q9Y6C5 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC16.54■□□□□ 0.24
PTCH2Q9Y6C5 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC16.54■□□□□ 0.24
PTCH2Q9Y6C5 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC16.54■□□□□ 0.24
PTCH2Q9Y6C5 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC16.54■□□□□ 0.24
PTCH2Q9Y6C5 KCTD6-202ENST00000404589 1533 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
PTCH2Q9Y6C5 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PTCH2Q9Y6C5 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
PTCH2Q9Y6C5 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PTCH2Q9Y6C5 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PTCH2Q9Y6C5 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
PTCH2Q9Y6C5 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PTCH2Q9Y6C5 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC16.54■□□□□ 0.24
PTCH2Q9Y6C5 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
PTCH2Q9Y6C5 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PTCH2Q9Y6C5 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PTCH2Q9Y6C5 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PTCH2Q9Y6C5 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC16.53■□□□□ 0.24
PTCH2Q9Y6C5 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PTCH2Q9Y6C5 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PTCH2Q9Y6C5 API5-202ENST00000420461 2009 ntTSL 2 BASIC16.53■□□□□ 0.24
PTCH2Q9Y6C5 CCNH-201ENST00000256897 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PTCH2Q9Y6C5 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PTCH2Q9Y6C5 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
PTCH2Q9Y6C5 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
PTCH2Q9Y6C5 COLEC11-203ENST00000382062 1633 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PTCH2Q9Y6C5 LAMA1-209ENST00000638611 1310 ntTSL 5 BASIC16.53■□□□□ 0.24
PTCH2Q9Y6C5 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
PTCH2Q9Y6C5 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PTCH2Q9Y6C5 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC16.53■□□□□ 0.24
PTCH2Q9Y6C5 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
PTCH2Q9Y6C5 AL935212.1-201ENST00000377548 906 ntTSL 5 BASIC16.53■□□□□ 0.24
PTCH2Q9Y6C5 MBD3L4-201ENST00000381394 775 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PTCH2Q9Y6C5 ACTG1P19-201ENST00000418987 1116 ntBASIC16.53■□□□□ 0.24
PTCH2Q9Y6C5 AL139125.1-201ENST00000420395 557 ntTSL 3 BASIC16.53■□□□□ 0.24
PTCH2Q9Y6C5 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC16.53■□□□□ 0.24
PTCH2Q9Y6C5 PTPA-215ENST00000432124 567 ntTSL 4 BASIC16.53■□□□□ 0.24
PTCH2Q9Y6C5 AL158166.1-201ENST00000433110 371 ntTSL 2 BASIC16.53■□□□□ 0.24
PTCH2Q9Y6C5 APCDD1L-AS1-206ENST00000445984 566 ntTSL 3 BASIC16.53■□□□□ 0.24
PTCH2Q9Y6C5 APCDD1L-AS1-208ENST00000448374 546 ntTSL 4 BASIC16.53■□□□□ 0.24
PTCH2Q9Y6C5 HMGB3-204ENST00000448905 812 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
PTCH2Q9Y6C5 AC063952.3-201ENST00000467756 308 ntBASIC16.53■□□□□ 0.24
PTCH2Q9Y6C5 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC16.53■□□□□ 0.24
PTCH2Q9Y6C5 AC122719.1-201ENST00000507989 559 ntTSL 4 BASIC16.53■□□□□ 0.24
PTCH2Q9Y6C5 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PTCH2Q9Y6C5 AC005845.1-201ENST00000539206 653 ntTSL 3 BASIC16.53■□□□□ 0.24
PTCH2Q9Y6C5 VPS18-202ENST00000558474 873 ntTSL 3 BASIC16.53■□□□□ 0.24
PTCH2Q9Y6C5 AC129507.4-201ENST00000570501 411 ntTSL 2 BASIC16.53■□□□□ 0.24
PTCH2Q9Y6C5 AC010504.1-201ENST00000591311 585 ntTSL 3 BASIC16.53■□□□□ 0.24
PTCH2Q9Y6C5 AC020934.2-201ENST00000592400 456 ntTSL 3 BASIC16.53■□□□□ 0.24
PTCH2Q9Y6C5 RPS5-204ENST00000598098 536 ntTSL 2 BASIC16.53■□□□□ 0.24
PTCH2Q9Y6C5 RPL13A-213ENST00000621674 1098 ntTSL 5 BASIC16.53■□□□□ 0.24
PTCH2Q9Y6C5 AC009145.4-201ENST00000625119 1294 ntBASIC16.53■□□□□ 0.24
PTCH2Q9Y6C5 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC16.53■□□□□ 0.24
PTCH2Q9Y6C5 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PTCH2Q9Y6C5 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PTCH2Q9Y6C5 SCAMP1-AS1-201ENST00000421004 1479 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PTCH2Q9Y6C5 AC025183.3-201ENST00000623526 1482 ntBASIC16.53■□□□□ 0.24
PTCH2Q9Y6C5 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PTCH2Q9Y6C5 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms