Protein–RNA interactions for Protein: P04553

PRM1, Sperm protamine P1, humanhuman

Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRM1P04553 CCDC144A-206ENST00000399273 8686 ntAPPRIS ALT2 TSL 1 (best) BASIC3.54□□□□□ -1.84
PRM1P04553 CDC14A-201ENST00000336454 4137 ntAPPRIS ALT1 TSL 1 (best) BASIC3.54□□□□□ -1.84
PRM1P04553 GLT8D2-201ENST00000360814 1880 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
PRM1P04553 ARHGEF2-203ENST00000361247 4149 ntAPPRIS P4 TSL 1 (best) BASIC3.54□□□□□ -1.84
PRM1P04553 LINC00365-201ENST00000413591 2618 ntTSL 3 BASIC3.54□□□□□ -1.84
PRM1P04553 AC007608.4-201ENST00000623140 3365 ntBASIC3.54□□□□□ -1.84
PRM1P04553 CAMTA2-201ENST00000348066 4491 ntAPPRIS P2 TSL 1 (best) BASIC3.54□□□□□ -1.84
PRM1P04553 PDE4C-206ENST00000594465 2988 ntAPPRIS P3 TSL 1 (best) BASIC3.54□□□□□ -1.84
PRM1P04553 YWHAE-201ENST00000264335 2211 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
PRM1P04553 UGGT2-201ENST00000376712 2240 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
PRM1P04553 TIAM2-202ENST00000318981 5916 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
PRM1P04553 PNMA6F-201ENST00000436629 3348 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
PRM1P04553 MAN2C1-224ENST00000565683 3300 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
PRM1P04553 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC3.54□□□□□ -1.84
PRM1P04553 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC3.54□□□□□ -1.84
PRM1P04553 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC3.54□□□□□ -1.84
PRM1P04553 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
PRM1P04553 AC020910.6-201ENST00000623084 1459 ntBASIC3.54□□□□□ -1.84
PRM1P04553 DNMT3A-201ENST00000264709 9501 ntAPPRIS P2 TSL 1 (best) BASIC3.54□□□□□ -1.84
PRM1P04553 LEPR-201ENST00000344610 2935 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
PRM1P04553 LDLR-205ENST00000557933 2941 ntAPPRIS ALT2 TSL 5 BASIC3.54□□□□□ -1.84
PRM1P04553 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC3.54□□□□□ -1.84
PRM1P04553 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC3.54□□□□□ -1.84
PRM1P04553 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC3.54□□□□□ -1.84
PRM1P04553 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
PRM1P04553 DDC-213ENST00000617822 1809 ntTSL 3 BASIC3.54□□□□□ -1.84
PRM1P04553 ATP2A3-203ENST00000359983 3290 ntTSL 5 BASIC3.53□□□□□ -1.84
PRM1P04553 C17orf80-201ENST00000255557 2163 ntAPPRIS ALT2 TSL 2 BASIC3.53□□□□□ -1.84
PRM1P04553 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
PRM1P04553 ETV4-202ENST00000393664 2182 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
PRM1P04553 PTPN6-202ENST00000399448 2159 ntAPPRIS P3 TSL 1 (best) BASIC3.53□□□□□ -1.84
PRM1P04553 RPS15A-213ENST00000576436 2190 ntTSL 4 BASIC3.53□□□□□ -1.84
PRM1P04553 BHMT-201ENST00000274353 2502 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
PRM1P04553 RPH3A-201ENST00000389385 4679 ntAPPRIS ALT2 TSL 1 (best) BASIC3.53□□□□□ -1.84
PRM1P04553 C12orf56-201ENST00000333722 3936 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
PRM1P04553 DPY19L2P2-204ENST00000438364 3947 ntTSL 2 BASIC3.53□□□□□ -1.84
PRM1P04553 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC3.53□□□□□ -1.84
PRM1P04553 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
PRM1P04553 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
PRM1P04553 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC3.53□□□□□ -1.84
PRM1P04553 TMEM173-201ENST00000330794 1771 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
PRM1P04553 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
PRM1P04553 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC3.53□□□□□ -1.84
PRM1P04553 MRPS10-201ENST00000053468 2110 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
PRM1P04553 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
PRM1P04553 NRP1-202ENST00000374816 2804 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
PRM1P04553 FAM160B2-201ENST00000289921 4245 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
PRM1P04553 CYYR1-201ENST00000299340 3101 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
PRM1P04553 AC037459.3-201ENST00000521025 2750 ntBASIC3.53□□□□□ -1.84
PRM1P04553 RGS16-201ENST00000367558 2427 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
PRM1P04553 CAST-223ENST00000508608 2425 ntAPPRIS ALT2 TSL 2 BASIC3.53□□□□□ -1.84
PRM1P04553 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
PRM1P04553 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC3.53□□□□□ -1.84
PRM1P04553 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
PRM1P04553 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC3.53□□□□□ -1.84
PRM1P04553 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
PRM1P04553 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
PRM1P04553 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC3.53□□□□□ -1.84
PRM1P04553 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
PRM1P04553 SEC24B-202ENST00000399100 3780 ntAPPRIS P3 TSL 1 (best) BASIC3.53□□□□□ -1.84
PRM1P04553 ETAA1-201ENST00000272342 3418 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
PRM1P04553 PTPRS-201ENST00000262963 4766 ntTSL 5 BASIC3.53□□□□□ -1.84
PRM1P04553 PTPRS-210ENST00000592099 4766 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
PRM1P04553 DIDO1-202ENST00000354665 2707 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
PRM1P04553 SEC16A-203ENST00000313050 8806 ntAPPRIS P3 TSL 2 BASIC3.53□□□□□ -1.84
PRM1P04553 ITFG2-201ENST00000228799 2361 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
PRM1P04553 GLO1-201ENST00000373365 2012 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
PRM1P04553 KIZ-213ENST00000620891 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC3.53□□□□□ -1.84
PRM1P04553 DNAJC9-201ENST00000372950 3032 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
PRM1P04553 MSH2-206ENST00000543555 3024 ntTSL 2 BASIC3.53□□□□□ -1.84
PRM1P04553 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
PRM1P04553 ZNF606-204ENST00000547828 2680 ntTSL 2 BASIC3.53□□□□□ -1.84
PRM1P04553 IFT80-201ENST00000326448 4306 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
PRM1P04553 SECISBP2-201ENST00000339901 3320 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
PRM1P04553 REL-201ENST00000295025 11255 ntAPPRIS P3 TSL 1 (best) BASIC3.53□□□□□ -1.84
PRM1P04553 ACLY-204ENST00000537919 2974 ntTSL 2 BASIC3.53□□□□□ -1.84
PRM1P04553 MAN2A2-201ENST00000360468 6268 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
PRM1P04553 NUF2-201ENST00000271452 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
PRM1P04553 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC3.53□□□□□ -1.84
PRM1P04553 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC3.53□□□□□ -1.84
PRM1P04553 ZNF572-201ENST00000319286 3275 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
PRM1P04553 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC3.53□□□□□ -1.84
PRM1P04553 DOCK3-201ENST00000266037 8755 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
PRM1P04553 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
PRM1P04553 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC3.53□□□□□ -1.84
PRM1P04553 LINC01987-201ENST00000593118 2281 ntTSL 2 BASIC3.53□□□□□ -1.84
PRM1P04553 AL445250.1-201ENST00000641671 2259 ntBASIC3.53□□□□□ -1.84
PRM1P04553 EPPK1-201ENST00000568225 15530 ntAPPRIS ALT2 BASIC3.53□□□□□ -1.84
PRM1P04553 HIF3A-204ENST00000300862 2551 ntAPPRIS ALT2 TSL 1 (best) BASIC3.53□□□□□ -1.84
PRM1P04553 PCDHB11-201ENST00000354757 4198 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
PRM1P04553 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
PRM1P04553 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
PRM1P04553 AC098650.1-201ENST00000635992 3535 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
PRM1P04553 TBCEL-202ENST00000422003 5142 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
PRM1P04553 OR10H5-202ENST00000642092 7044 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
PRM1P04553 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
PRM1P04553 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
PRM1P04553 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
PRM1P04553 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
PRM1P04553 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 57.6 ms