RNA–Protein interactions for RNA: ENST00000326448.11

IFT80-201, Transcript of intraflagellar transport 80, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IFT80, Length 4,306 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT80-201ENST00000326448 NISCHQ9Y2I1 1504 aa21.27■■□□□ 1
IFT80-201ENST00000326448 DCAF8L2P0C7V8 631 aa20.2■□□□□ 0.82
IFT80-201ENST00000326448 SUPT5HO00267 1087 aaKnown RBP20.18■□□□□ 0.82
IFT80-201ENST00000326448 SHROOM4Q9ULL8 1493 aa20.01■□□□□ 0.79
IFT80-201ENST00000326448 PCGF6Q9BYE7 350 aa19.4■□□□□ 0.7
IFT80-201ENST00000326448 EHMT2Q96KQ7 1210 aa19.14■□□□□ 0.65
IFT80-201ENST00000326448 HRCP23327 699 aa18.97■□□□□ 0.63
IFT80-201ENST00000326448 FAM9AQ8IZU1 332 aaPredicted RBP18.88■□□□□ 0.61
IFT80-201ENST00000326448 CHIC1Q5VXU3 224 aa18.79■□□□□ 0.6
IFT80-201ENST00000326448 PPARGC1BQ86YN6 1023 aaKnown RBP18.73■□□□□ 0.59
IFT80-201ENST00000326448 LOC105371045A0A1W2PR82 267 aa18.65■□□□□ 0.58
IFT80-201ENST00000326448 ZEB1P37275 1124 aaPredicted RBP18.63■□□□□ 0.57
IFT80-201ENST00000326448 TRIM41Q8WV44 630 aa18.6■□□□□ 0.57
IFT80-201ENST00000326448 TRIM26Q12899 539 aaPredicted RBP18.56■□□□□ 0.56
IFT80-201ENST00000326448 TTBK1Q5TCY1 1321 aaPredicted RBP18.56■□□□□ 0.56
IFT80-201ENST00000326448 PELP1Q8IZL8 1130 aaKnown RBP18.46■□□□□ 0.55
IFT80-201ENST00000326448 CCER1Q8TC90 406 aaPredicted RBP18.44■□□□□ 0.54
IFT80-201ENST00000326448 CENPBP07199 599 aaPredicted RBP18.34■□□□□ 0.53
IFT80-201ENST00000326448 APLP2Q06481 763 aa18.18■□□□□ 0.5
IFT80-201ENST00000326448 YTHDC1Q96MU7 727 aaKnown RBP18.12■□□□□ 0.49
IFT80-201ENST00000326448 UBTFP17480 764 aaKnown RBP18.04■□□□□ 0.48
IFT80-201ENST00000326448 RANGAP1P46060 587 aaPredicted RBP18.04■□□□□ 0.48
IFT80-201ENST00000326448 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.02■□□□□ 0.48
IFT80-201ENST00000326448 MYO15BQ96JP2 1530 aa17.96■□□□□ 0.47
IFT80-201ENST00000326448 DIEXFQ68CQ4 756 aaKnown RBP17.87■□□□□ 0.45
IFT80-201ENST00000326448 MYT1Q01538 1121 aa17.84■□□□□ 0.45
IFT80-201ENST00000326448 DCAF1Q9Y4B6 1507 aa17.81■□□□□ 0.44
IFT80-201ENST00000326448 ZCCHC6Q5VYS8 1495 aaKnown RBP17.81■□□□□ 0.44
IFT80-201ENST00000326448 GTF3C3Q9Y5Q9 886 aa17.76■□□□□ 0.43
IFT80-201ENST00000326448 HNRNPUL2Q1KMD3 747 aaKnown RBP17.74■□□□□ 0.43
IFT80-201ENST00000326448 ACIN1Q9UKV3 1341 aaKnown RBP17.66■□□□□ 0.42
IFT80-201ENST00000326448 SCAF1Q9H7N4 1312 aaKnown RBP17.62■□□□□ 0.41
IFT80-201ENST00000326448 ATP1B4Q9UN42 357 aaPredicted RBP17.51■□□□□ 0.39
IFT80-201ENST00000326448 NEUROD1Q13562 356 aa17.5■□□□□ 0.39
IFT80-201ENST00000326448 ITGAEP38570 1179 aa17.49■□□□□ 0.39
IFT80-201ENST00000326448 NEFLP07196 543 aa17.47■□□□□ 0.39
IFT80-201ENST00000326448 ZNF316A6NFI3 1004 aaPredicted RBP17.46■□□□□ 0.39
IFT80-201ENST00000326448 ERICH6Q7L0X2 663 aa17.42■□□□□ 0.38
IFT80-201ENST00000326448 CCDC180Q9P1Z9 1646 aa17.3■□□□□ 0.36
IFT80-201ENST00000326448 ABCC9O60706 1549 aa17.28■□□□□ 0.36
IFT80-201ENST00000326448 CSRNP3Q8WYN3 585 aa17.26■□□□□ 0.35
IFT80-201ENST00000326448 SCRIBQ14160 1630 aa17.24■□□□□ 0.35
IFT80-201ENST00000326448 RSF1Q96T23 1441 aaPredicted RBP17.2■□□□□ 0.34
IFT80-201ENST00000326448 BCANQ96GW7 911 aa17.2■□□□□ 0.34
IFT80-201ENST00000326448 MIER1Q8N108 512 aa17.13■□□□□ 0.33
IFT80-201ENST00000326448 PABPN1Q86U42 306 aaKnown RBP eCLIP17.12■□□□□ 0.33
IFT80-201ENST00000326448 FAM50AQ14320 339 aaKnown RBP17.02■□□□□ 0.32
IFT80-201ENST00000326448 CNGB1Q14028 1251 aaPredicted RBP16.97■□□□□ 0.31
IFT80-201ENST00000326448 CEP162Q5TB80 1403 aa16.93■□□□□ 0.3
IFT80-201ENST00000326448 POLR3GLQ9BT43 218 aa16.91■□□□□ 0.3
IFT80-201ENST00000326448 ANP32CO43423 234 aa16.89■□□□□ 0.29
IFT80-201ENST00000326448 FKBP8Q14318 412 aa16.87■□□□□ 0.29
IFT80-201ENST00000326448 RB1CC1Q8TDY2 1594 aa16.84■□□□□ 0.29
IFT80-201ENST00000326448 CLSPNQ9HAW4 1339 aa16.84■□□□□ 0.29
IFT80-201ENST00000326448 DDX10Q13206 875 aaKnown RBP16.82■□□□□ 0.28
IFT80-201ENST00000326448 CECR2Q9BXF3 1484 aa16.8■□□□□ 0.28
IFT80-201ENST00000326448 CLIP1P30622 1438 aa16.78■□□□□ 0.28
IFT80-201ENST00000326448 TNIKQ9UKE5 1360 aa16.77■□□□□ 0.28
IFT80-201ENST00000326448 P3H3Q8IVL6 736 aa16.76■□□□□ 0.27
IFT80-201ENST00000326448 CDK11AQ9UQ88 783 aaPredicted RBP16.75■□□□□ 0.27
IFT80-201ENST00000326448 TRIM52Q96A61 297 aa16.73■□□□□ 0.27
IFT80-201ENST00000326448 GOLGA3Q08378 1498 aa16.69■□□□□ 0.26
IFT80-201ENST00000326448 SOGA1O94964 1423 aa16.69■□□□□ 0.26
IFT80-201ENST00000326448 HIRIP3Q9BW71 556 aaPredicted RBP16.68■□□□□ 0.26
IFT80-201ENST00000326448 EEA1Q15075 1411 aa16.68■□□□□ 0.26
IFT80-201ENST00000326448 SUPT16HQ9Y5B9 1047 aaKnown RBP16.64■□□□□ 0.25
IFT80-201ENST00000326448 RTL5Q5HYW3 569 aaPredicted RBP16.62■□□□□ 0.25
IFT80-201ENST00000326448 MROH2BQ7Z745 1585 aa16.62■□□□□ 0.25
IFT80-201ENST00000326448 HNRNPUQ00839 825 aaKnown RBP eCLIP16.61■□□□□ 0.25
IFT80-201ENST00000326448 WRNQ14191 1432 aaPredicted RBP eCLIP16.59■□□□□ 0.259e-6■■■■■ 50.1
IFT80-201ENST00000326448 CCDC88BA6NC98 1476 aa16.58■□□□□ 0.24
IFT80-201ENST00000326448 DAXXQ9UER7 740 aaPredicted RBP16.56■□□□□ 0.24
IFT80-201ENST00000326448 ABCC8Q09428 1581 aa16.55■□□□□ 0.24
IFT80-201ENST00000326448 TONSLQ96HA7 1378 aa16.55■□□□□ 0.24
IFT80-201ENST00000326448 ANP32EQ9BTT0 268 aa16.55■□□□□ 0.24
IFT80-201ENST00000326448 IRX6P78412 446 aaPredicted RBP16.54■□□□□ 0.24
IFT80-201ENST00000326448 ZNF326Q5BKZ1 582 aaKnown RBP16.54■□□□□ 0.24
IFT80-201ENST00000326448 CEP164Q9UPV0 1460 aa16.52■□□□□ 0.24
IFT80-201ENST00000326448 NACADO15069 1562 aa16.48■□□□□ 0.23
IFT80-201ENST00000326448 FAM9BQ8IZU0 186 aa16.48■□□□□ 0.23
IFT80-201ENST00000326448 BAZ1AQ9NRL2 1556 aaPredicted RBP16.48■□□□□ 0.23
IFT80-201ENST00000326448 ARID3CA6NKF2 412 aa16.46■□□□□ 0.23
IFT80-201ENST00000326448 SIN3AQ96ST3 1273 aa16.45■□□□□ 0.22
IFT80-201ENST00000326448 WIZO95785 1651 aa16.43■□□□□ 0.22
IFT80-201ENST00000326448 VPS8Q8N3P4 1428 aa16.4■□□□□ 0.22
IFT80-201ENST00000326448 KANK4Q5T7N3 995 aaPredicted RBP16.39■□□□□ 0.21
IFT80-201ENST00000326448 CHIC2Q9UKJ5 165 aa16.38■□□□□ 0.21
IFT80-201ENST00000326448 ANP32AP39687 249 aaKnown RBP16.38■□□□□ 0.21
IFT80-201ENST00000326448 TSHZ2Q9NRE2 1034 aa16.37■□□□□ 0.21
IFT80-201ENST00000326448 RUSC2Q8N2Y8 1516 aa16.35■□□□□ 0.21
IFT80-201ENST00000326448 NPM2Q86SE8 214 aaKnown RBP16.34■□□□□ 0.21
IFT80-201ENST00000326448 NBR1Q14596 966 aa16.34■□□□□ 0.21
IFT80-201ENST00000326448 MRS2Q9HD23 443 aa16.34■□□□□ 0.21
IFT80-201ENST00000326448 CCNB3Q8WWL7 1395 aa16.33■□□□□ 0.2
IFT80-201ENST00000326448 KCNH8Q96L42 1107 aa16.3■□□□□ 0.2
IFT80-201ENST00000326448 RBM19Q9Y4C8 960 aaKnown RBP16.29■□□□□ 0.2
IFT80-201ENST00000326448 CCDC136Q96JN2 1154 aa16.28■□□□□ 0.2
IFT80-201ENST00000326448 MTUS2Q5JR59 1369 aa16.26■□□□□ 0.19
IFT80-201ENST00000326448 SALL2Q9Y467 1007 aaPredicted RBP16.25■□□□□ 0.19
IFT80-201ENST00000326448 EIF4G2P78344 907 aaKnown RBP eCLIP16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms