RNA–Protein interactions for RNA: ENST00000348066.7

CAMTA2-201, Transcript of calmodulin binding transcription activator 2, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CAMTA2, Length 4,491 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAMTA2-201ENST00000348066 NISCHQ9Y2I1 1504 aa21.85■■□□□ 1.09
CAMTA2-201ENST00000348066 SUPT5HO00267 1087 aaKnown RBP19.94■□□□□ 0.78
CAMTA2-201ENST00000348066 SHROOM4Q9ULL8 1493 aa19.76■□□□□ 0.75
CAMTA2-201ENST00000348066 DCAF8L2P0C7V8 631 aa19.63■□□□□ 0.73
CAMTA2-201ENST00000348066 PCGF6Q9BYE7 350 aa19.37■□□□□ 0.69
CAMTA2-201ENST00000348066 HRCP23327 699 aa19.25■□□□□ 0.67
CAMTA2-201ENST00000348066 PELP1Q8IZL8 1130 aaKnown RBP18.97■□□□□ 0.63
CAMTA2-201ENST00000348066 CHIC1Q5VXU3 224 aa18.88■□□□□ 0.61
CAMTA2-201ENST00000348066 ZEB1P37275 1124 aaPredicted RBP18.86■□□□□ 0.61
CAMTA2-201ENST00000348066 PPARGC1BQ86YN6 1023 aaKnown RBP18.78■□□□□ 0.6
CAMTA2-201ENST00000348066 TRIM26Q12899 539 aaPredicted RBP18.71■□□□□ 0.59
CAMTA2-201ENST00000348066 CCDC180Q9P1Z9 1646 aa18.66■□□□□ 0.58
CAMTA2-201ENST00000348066 EHMT2Q96KQ7 1210 aa18.65■□□□□ 0.58
CAMTA2-201ENST00000348066 FAM9AQ8IZU1 332 aaPredicted RBP18.57■□□□□ 0.56
CAMTA2-201ENST00000348066 LOC105371045A0A1W2PR82 267 aa18.57■□□□□ 0.56
CAMTA2-201ENST00000348066 TRIM41Q8WV44 630 aa18.48■□□□□ 0.55
CAMTA2-201ENST00000348066 CENPBP07199 599 aaPredicted RBP18.47■□□□□ 0.55
CAMTA2-201ENST00000348066 MYT1Q01538 1121 aa18.41■□□□□ 0.54
CAMTA2-201ENST00000348066 CCER1Q8TC90 406 aaPredicted RBP18.37■□□□□ 0.53
CAMTA2-201ENST00000348066 ZCCHC6Q5VYS8 1495 aaKnown RBP18.31■□□□□ 0.52
CAMTA2-201ENST00000348066 ABCC9O60706 1549 aa18.28■□□□□ 0.52
CAMTA2-201ENST00000348066 DCAF1Q9Y4B6 1507 aa18.22■□□□□ 0.51
CAMTA2-201ENST00000348066 MYO15BQ96JP2 1530 aa18.2■□□□□ 0.5
CAMTA2-201ENST00000348066 TTBK1Q5TCY1 1321 aaPredicted RBP18.16■□□□□ 0.5
CAMTA2-201ENST00000348066 YTHDC1Q96MU7 727 aaKnown RBP17.99■□□□□ 0.47
CAMTA2-201ENST00000348066 APLP2Q06481 763 aa17.98■□□□□ 0.47
CAMTA2-201ENST00000348066 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.96■□□□□ 0.47
CAMTA2-201ENST00000348066 DIEXFQ68CQ4 756 aaKnown RBP17.96■□□□□ 0.46
CAMTA2-201ENST00000348066 ACIN1Q9UKV3 1341 aaKnown RBP17.91■□□□□ 0.46
CAMTA2-201ENST00000348066 SCAF1Q9H7N4 1312 aaKnown RBP17.9■□□□□ 0.46
CAMTA2-201ENST00000348066 GTF3C3Q9Y5Q9 886 aa17.89■□□□□ 0.45
CAMTA2-201ENST00000348066 UBTFP17480 764 aaKnown RBP17.82■□□□□ 0.44
CAMTA2-201ENST00000348066 SCRIBQ14160 1630 aa17.71■□□□□ 0.42
CAMTA2-201ENST00000348066 NEUROD1Q13562 356 aa17.68■□□□□ 0.42
CAMTA2-201ENST00000348066 ZNF316A6NFI3 1004 aaPredicted RBP17.6■□□□□ 0.41
CAMTA2-201ENST00000348066 RANGAP1P46060 587 aaPredicted RBP17.58■□□□□ 0.4
CAMTA2-201ENST00000348066 HNRNPUL2Q1KMD3 747 aaKnown RBP17.57■□□□□ 0.4
CAMTA2-201ENST00000348066 NACADO15069 1562 aa17.5■□□□□ 0.39
CAMTA2-201ENST00000348066 PABPN1Q86U42 306 aaKnown RBP eCLIP17.49■□□□□ 0.39
CAMTA2-201ENST00000348066 NEFLP07196 543 aa17.46■□□□□ 0.39
CAMTA2-201ENST00000348066 RB1CC1Q8TDY2 1594 aa17.41■□□□□ 0.38
CAMTA2-201ENST00000348066 ERICH6Q7L0X2 663 aa17.4■□□□□ 0.38
CAMTA2-201ENST00000348066 RSF1Q96T23 1441 aaPredicted RBP17.33■□□□□ 0.37
CAMTA2-201ENST00000348066 CECR2Q9BXF3 1484 aa17.24■□□□□ 0.35
CAMTA2-201ENST00000348066 CSRNP3Q8WYN3 585 aa17.24■□□□□ 0.35
CAMTA2-201ENST00000348066 CLSPNQ9HAW4 1339 aa17.23■□□□□ 0.35
CAMTA2-201ENST00000348066 MIER1Q8N108 512 aa17.21■□□□□ 0.35
CAMTA2-201ENST00000348066 ITGAEP38570 1179 aa17.17■□□□□ 0.34
CAMTA2-201ENST00000348066 BCANQ96GW7 911 aa17.1■□□□□ 0.33
CAMTA2-201ENST00000348066 ATP1B4Q9UN42 357 aaPredicted RBP17.09■□□□□ 0.33
CAMTA2-201ENST00000348066 UNC13AQ9UPW8 1703 aa17.07■□□□□ 0.32
CAMTA2-201ENST00000348066 CEP162Q5TB80 1403 aa17.05■□□□□ 0.32
CAMTA2-201ENST00000348066 MROH2BQ7Z745 1585 aa17.04■□□□□ 0.32
CAMTA2-201ENST00000348066 TNIKQ9UKE5 1360 aa16.96■□□□□ 0.31
CAMTA2-201ENST00000348066 BICRAQ9NZM4 1560 aa16.96■□□□□ 0.31
CAMTA2-201ENST00000348066 EEA1Q15075 1411 aa16.92■□□□□ 0.3
CAMTA2-201ENST00000348066 WIZO95785 1651 aa16.9■□□□□ 0.3
CAMTA2-201ENST00000348066 FKBP8Q14318 412 aa16.9■□□□□ 0.3
CAMTA2-201ENST00000348066 ANP32CO43423 234 aa16.89■□□□□ 0.29
CAMTA2-201ENST00000348066 ANP32EQ9BTT0 268 aa16.86■□□□□ 0.29
CAMTA2-201ENST00000348066 GOLGA3Q08378 1498 aa16.85■□□□□ 0.29
CAMTA2-201ENST00000348066 SUPT16HQ9Y5B9 1047 aaKnown RBP16.84■□□□□ 0.29
CAMTA2-201ENST00000348066 CLIP1P30622 1438 aa16.84■□□□□ 0.29
CAMTA2-201ENST00000348066 CDK11AQ9UQ88 783 aaPredicted RBP16.83■□□□□ 0.28
CAMTA2-201ENST00000348066 FAM50AQ14320 339 aaKnown RBP16.82■□□□□ 0.28
CAMTA2-201ENST00000348066 BAZ1AQ9NRL2 1556 aaPredicted RBP16.8■□□□□ 0.28
CAMTA2-201ENST00000348066 WRNQ14191 1432 aaPredicted RBP eCLIP16.76■□□□□ 0.27
CAMTA2-201ENST00000348066 DDX10Q13206 875 aaKnown RBP16.76■□□□□ 0.27
CAMTA2-201ENST00000348066 SMARCA4P51532 1647 aa16.74■□□□□ 0.27
CAMTA2-201ENST00000348066 SOGA1O94964 1423 aa16.73■□□□□ 0.27
CAMTA2-201ENST00000348066 CEP164Q9UPV0 1460 aa16.68■□□□□ 0.26
CAMTA2-201ENST00000348066 RTL5Q5HYW3 569 aaPredicted RBP16.66■□□□□ 0.26
CAMTA2-201ENST00000348066 CCDC88BA6NC98 1476 aa16.66■□□□□ 0.26
CAMTA2-201ENST00000348066 TRIM52Q96A61 297 aa16.65■□□□□ 0.26
CAMTA2-201ENST00000348066 ABCC8Q09428 1581 aa16.62■□□□□ 0.25
CAMTA2-201ENST00000348066 TSHZ2Q9NRE2 1034 aa16.62■□□□□ 0.25
CAMTA2-201ENST00000348066 MYT1LQ9UL68 1186 aa16.57■□□□□ 0.24
CAMTA2-201ENST00000348066 HNRNPUQ00839 825 aaKnown RBP eCLIP16.57■□□□□ 0.24
CAMTA2-201ENST00000348066 VPS8Q8N3P4 1428 aa16.57■□□□□ 0.24
CAMTA2-201ENST00000348066 BCL11AQ9H165 835 aa16.57■□□□□ 0.24
CAMTA2-201ENST00000348066 POLR3GLQ9BT43 218 aa16.56■□□□□ 0.24
CAMTA2-201ENST00000348066 ATAD2BQ9ULI0 1458 aa16.54■□□□□ 0.24
CAMTA2-201ENST00000348066 CNGB1Q14028 1251 aaPredicted RBP16.53■□□□□ 0.24
CAMTA2-201ENST00000348066 TONSLQ96HA7 1378 aa16.52■□□□□ 0.24
CAMTA2-201ENST00000348066 TOP2AP11388 1531 aaKnown RBP16.52■□□□□ 0.23
CAMTA2-201ENST00000348066 BAZ1BQ9UIG0 1483 aaKnown RBP16.5■□□□□ 0.23
CAMTA2-201ENST00000348066 EIF4G1Q04637 1599 aaKnown RBP16.49■□□□□ 0.23
CAMTA2-201ENST00000348066 HIRIP3Q9BW71 556 aaPredicted RBP16.49■□□□□ 0.23
CAMTA2-201ENST00000348066 DAXXQ9UER7 740 aaPredicted RBP16.48■□□□□ 0.23
CAMTA2-201ENST00000348066 RBM19Q9Y4C8 960 aaKnown RBP16.47■□□□□ 0.23
CAMTA2-201ENST00000348066 P3H3Q8IVL6 736 aa16.45■□□□□ 0.22
CAMTA2-201ENST00000348066 SMARCA2P51531 1590 aa16.45■□□□□ 0.22
CAMTA2-201ENST00000348066 ANP32AP39687 249 aaKnown RBP16.44■□□□□ 0.22
CAMTA2-201ENST00000348066 IRX6P78412 446 aaPredicted RBP16.43■□□□□ 0.22
CAMTA2-201ENST00000348066 CCNB3Q8WWL7 1395 aa16.41■□□□□ 0.22
CAMTA2-201ENST00000348066 RUSC2Q8N2Y8 1516 aa16.4■□□□□ 0.22
CAMTA2-201ENST00000348066 DHX57Q6P158 1386 aaKnown RBP16.4■□□□□ 0.22
CAMTA2-201ENST00000348066 DNAJC5BQ9UF47 199 aa16.38■□□□□ 0.21
CAMTA2-201ENST00000348066 CCER2I3L3R5 266 aa16.38■□□□□ 0.21
CAMTA2-201ENST00000348066 SIN3AQ96ST3 1273 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms