Protein–RNA interactions for Protein: P04553

PRM1, Sperm protamine P1, humanhuman

Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRM1P04553 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC9.41□□□□□ -0.9
PRM1P04553 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC8.61□□□□□ -1.03
PRM1P04553 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC8.42□□□□□ -1.06
PRM1P04553 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
PRM1P04553 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC8.2□□□□□ -1.1
PRM1P04553 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
PRM1P04553 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
PRM1P04553 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC8.06□□□□□ -1.12
PRM1P04553 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC7.98□□□□□ -1.13
PRM1P04553 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC7.97□□□□□ -1.13
PRM1P04553 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
PRM1P04553 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
PRM1P04553 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
PRM1P04553 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC7.88□□□□□ -1.15
PRM1P04553 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC7.87□□□□□ -1.15
PRM1P04553 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC7.86□□□□□ -1.15
PRM1P04553 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
PRM1P04553 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
PRM1P04553 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
PRM1P04553 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
PRM1P04553 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
PRM1P04553 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC7.71□□□□□ -1.18
PRM1P04553 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
PRM1P04553 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC7.68□□□□□ -1.18
PRM1P04553 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC7.65□□□□□ -1.18
PRM1P04553 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
PRM1P04553 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.19
PRM1P04553 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC7.62□□□□□ -1.19
PRM1P04553 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
PRM1P04553 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
PRM1P04553 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC7.6□□□□□ -1.19
PRM1P04553 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC7.6□□□□□ -1.19
PRM1P04553 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
PRM1P04553 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC7.59□□□□□ -1.2
PRM1P04553 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
PRM1P04553 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
PRM1P04553 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC7.58□□□□□ -1.2
PRM1P04553 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
PRM1P04553 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC7.55□□□□□ -1.2
PRM1P04553 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC7.55□□□□□ -1.2
PRM1P04553 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC7.55□□□□□ -1.2
PRM1P04553 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC7.53□□□□□ -1.2
PRM1P04553 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
PRM1P04553 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
PRM1P04553 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC7.5□□□□□ -1.21
PRM1P04553 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC7.49□□□□□ -1.21
PRM1P04553 ST7-205ENST00000393446 2114 ntTSL 5 BASIC7.49□□□□□ -1.21
PRM1P04553 ST7-202ENST00000323984 2142 ntTSL 5 BASIC7.48□□□□□ -1.21
PRM1P04553 ST7-207ENST00000393449 2127 ntTSL 5 BASIC7.48□□□□□ -1.21
PRM1P04553 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
PRM1P04553 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
PRM1P04553 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC7.48□□□□□ -1.21
PRM1P04553 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
PRM1P04553 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
PRM1P04553 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC7.46□□□□□ -1.22
PRM1P04553 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC7.46□□□□□ -1.22
PRM1P04553 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC7.43□□□□□ -1.22
PRM1P04553 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC7.43□□□□□ -1.22
PRM1P04553 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
PRM1P04553 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC7.41□□□□□ -1.22
PRM1P04553 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
PRM1P04553 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC7.4□□□□□ -1.22
PRM1P04553 AL161658.1-201ENST00000623641 1967 ntBASIC7.39□□□□□ -1.23
PRM1P04553 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
PRM1P04553 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC7.37□□□□□ -1.23
PRM1P04553 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
PRM1P04553 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
PRM1P04553 AC139426.1-201ENST00000568218 2529 ntBASIC7.37□□□□□ -1.23
PRM1P04553 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC7.36□□□□□ -1.23
PRM1P04553 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
PRM1P04553 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC7.33□□□□□ -1.24
PRM1P04553 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
PRM1P04553 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC7.32□□□□□ -1.24
PRM1P04553 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC7.31□□□□□ -1.24
PRM1P04553 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
PRM1P04553 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC7.3□□□□□ -1.24
PRM1P04553 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC7.3□□□□□ -1.24
PRM1P04553 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC7.29□□□□□ -1.24
PRM1P04553 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
PRM1P04553 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
PRM1P04553 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC7.27□□□□□ -1.25
PRM1P04553 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
PRM1P04553 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
PRM1P04553 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC7.26□□□□□ -1.25
PRM1P04553 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
PRM1P04553 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
PRM1P04553 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC7.24□□□□□ -1.25
PRM1P04553 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
PRM1P04553 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC7.24□□□□□ -1.25
PRM1P04553 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
PRM1P04553 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC7.23□□□□□ -1.25
PRM1P04553 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC7.23□□□□□ -1.25
PRM1P04553 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
PRM1P04553 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
PRM1P04553 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.25
PRM1P04553 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.25
PRM1P04553 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC7.21□□□□□ -1.26
PRM1P04553 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC7.2□□□□□ -1.26
PRM1P04553 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC7.2□□□□□ -1.26
PRM1P04553 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC7.2□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms