Protein–RNA interactions for Protein: Q9Y4Z0

LSM4, U6 snRNA-associated Sm-like protein LSm4, humanhuman

Known RBP Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4Q9Y4Z0 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC18.27■□□□□ 0.51
LSM4Q9Y4Z0 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
LSM4Q9Y4Z0 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
LSM4Q9Y4Z0 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
LSM4Q9Y4Z0 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
LSM4Q9Y4Z0 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
LSM4Q9Y4Z0 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
LSM4Q9Y4Z0 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
LSM4Q9Y4Z0 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
LSM4Q9Y4Z0 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC18.25■□□□□ 0.51
LSM4Q9Y4Z0 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC18.25■□□□□ 0.51
LSM4Q9Y4Z0 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC18.25■□□□□ 0.51
LSM4Q9Y4Z0 IDNK-201ENST00000376417 511 ntTSL 5 BASIC18.25■□□□□ 0.51
LSM4Q9Y4Z0 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
LSM4Q9Y4Z0 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC18.25■□□□□ 0.51
LSM4Q9Y4Z0 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC18.25■□□□□ 0.51
LSM4Q9Y4Z0 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
LSM4Q9Y4Z0 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
LSM4Q9Y4Z0 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
LSM4Q9Y4Z0 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
LSM4Q9Y4Z0 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC18.25■□□□□ 0.51
LSM4Q9Y4Z0 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
LSM4Q9Y4Z0 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
LSM4Q9Y4Z0 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
LSM4Q9Y4Z0 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
LSM4Q9Y4Z0 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC18.24■□□□□ 0.51
LSM4Q9Y4Z0 FOXO3B-201ENST00000395675 1928 ntBASIC18.24■□□□□ 0.51
LSM4Q9Y4Z0 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
LSM4Q9Y4Z0 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
LSM4Q9Y4Z0 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC18.24■□□□□ 0.51
LSM4Q9Y4Z0 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
LSM4Q9Y4Z0 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
LSM4Q9Y4Z0 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
LSM4Q9Y4Z0 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
LSM4Q9Y4Z0 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
LSM4Q9Y4Z0 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
LSM4Q9Y4Z0 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
LSM4Q9Y4Z0 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
LSM4Q9Y4Z0 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
LSM4Q9Y4Z0 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
LSM4Q9Y4Z0 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC18.23■□□□□ 0.51
LSM4Q9Y4Z0 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC18.23■□□□□ 0.51
LSM4Q9Y4Z0 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
LSM4Q9Y4Z0 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
LSM4Q9Y4Z0 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
LSM4Q9Y4Z0 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
LSM4Q9Y4Z0 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
LSM4Q9Y4Z0 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
LSM4Q9Y4Z0 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
LSM4Q9Y4Z0 GUSBP5-201ENST00000418136 578 ntBASIC18.22■□□□□ 0.51
LSM4Q9Y4Z0 MTX2-204ENST00000443241 799 ntTSL 3 BASIC18.22■□□□□ 0.51
LSM4Q9Y4Z0 OR2A1-AS1-204ENST00000470435 602 ntBASIC18.22■□□□□ 0.51
LSM4Q9Y4Z0 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
LSM4Q9Y4Z0 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
LSM4Q9Y4Z0 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
LSM4Q9Y4Z0 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
LSM4Q9Y4Z0 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC18.22■□□□□ 0.51
LSM4Q9Y4Z0 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC18.22■□□□□ 0.51
LSM4Q9Y4Z0 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC18.21■□□□□ 0.51
LSM4Q9Y4Z0 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC18.21■□□□□ 0.51
LSM4Q9Y4Z0 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
LSM4Q9Y4Z0 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
LSM4Q9Y4Z0 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC18.21■□□□□ 0.51
LSM4Q9Y4Z0 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC18.21■□□□□ 0.51
LSM4Q9Y4Z0 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
LSM4Q9Y4Z0 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
LSM4Q9Y4Z0 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
LSM4Q9Y4Z0 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
LSM4Q9Y4Z0 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
LSM4Q9Y4Z0 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
LSM4Q9Y4Z0 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
LSM4Q9Y4Z0 AL117328.2-201ENST00000624617 1940 ntBASIC18.2■□□□□ 0.5
LSM4Q9Y4Z0 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
LSM4Q9Y4Z0 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
LSM4Q9Y4Z0 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
LSM4Q9Y4Z0 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
LSM4Q9Y4Z0 AC131212.1-201ENST00000613771 668 ntBASIC18.2■□□□□ 0.5
LSM4Q9Y4Z0 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC18.2■□□□□ 0.5
LSM4Q9Y4Z0 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
LSM4Q9Y4Z0 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
LSM4Q9Y4Z0 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
LSM4Q9Y4Z0 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
LSM4Q9Y4Z0 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
LSM4Q9Y4Z0 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
LSM4Q9Y4Z0 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC18.19■□□□□ 0.5
LSM4Q9Y4Z0 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
LSM4Q9Y4Z0 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
LSM4Q9Y4Z0 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC18.19■□□□□ 0.5
LSM4Q9Y4Z0 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
LSM4Q9Y4Z0 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
LSM4Q9Y4Z0 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC18.19■□□□□ 0.5
LSM4Q9Y4Z0 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC18.19■□□□□ 0.5
LSM4Q9Y4Z0 AC103724.3-201ENST00000564481 992 ntBASIC18.19■□□□□ 0.5
LSM4Q9Y4Z0 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
LSM4Q9Y4Z0 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC18.19■□□□□ 0.5
LSM4Q9Y4Z0 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
LSM4Q9Y4Z0 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
LSM4Q9Y4Z0 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
LSM4Q9Y4Z0 GALC-202ENST00000393568 2054 ntTSL 2 BASIC18.18■□□□□ 0.5
LSM4Q9Y4Z0 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 16.5 ms