Protein–RNA interactions for Protein: Q9UMX0

UBQLN1, Ubiquilin-1, humanhuman

Known RBP Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN1Q9UMX0 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
UBQLN1Q9UMX0 AL512631.2-201ENST00000604634 923 ntBASIC24.7■■□□□ 1.54
UBQLN1Q9UMX0 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC24.7■■□□□ 1.54
UBQLN1Q9UMX0 TMEM202-AS1-202ENST00000565181 2325 ntBASIC24.69■■□□□ 1.54
UBQLN1Q9UMX0 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC24.69■■□□□ 1.54
UBQLN1Q9UMX0 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC24.69■■□□□ 1.54
UBQLN1Q9UMX0 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC24.69■■□□□ 1.54
UBQLN1Q9UMX0 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC24.69■■□□□ 1.54
UBQLN1Q9UMX0 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
UBQLN1Q9UMX0 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
UBQLN1Q9UMX0 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC24.69■■□□□ 1.54
UBQLN1Q9UMX0 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
UBQLN1Q9UMX0 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
UBQLN1Q9UMX0 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC24.69■■□□□ 1.54
UBQLN1Q9UMX0 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
UBQLN1Q9UMX0 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC24.68■■□□□ 1.54
UBQLN1Q9UMX0 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
UBQLN1Q9UMX0 RASSF1-AS1-201ENST00000629828 790 ntBASIC24.68■■□□□ 1.54
UBQLN1Q9UMX0 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
UBQLN1Q9UMX0 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC24.68■■□□□ 1.54
UBQLN1Q9UMX0 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC24.68■■□□□ 1.54
UBQLN1Q9UMX0 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
UBQLN1Q9UMX0 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
UBQLN1Q9UMX0 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC24.67■■□□□ 1.54
UBQLN1Q9UMX0 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC24.67■■□□□ 1.54
UBQLN1Q9UMX0 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC24.67■■□□□ 1.54
UBQLN1Q9UMX0 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
UBQLN1Q9UMX0 AL136116.3-201ENST00000402907 1138 ntBASIC24.67■■□□□ 1.54
UBQLN1Q9UMX0 MIR4466-201ENST00000606121 54 ntBASIC24.67■■□□□ 1.54
UBQLN1Q9UMX0 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC24.67■■□□□ 1.54
UBQLN1Q9UMX0 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC24.67■■□□□ 1.54
UBQLN1Q9UMX0 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
UBQLN1Q9UMX0 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
UBQLN1Q9UMX0 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
UBQLN1Q9UMX0 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC24.66■■□□□ 1.54
UBQLN1Q9UMX0 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC24.66■■□□□ 1.54
UBQLN1Q9UMX0 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC24.66■■□□□ 1.54
UBQLN1Q9UMX0 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC24.66■■□□□ 1.54
UBQLN1Q9UMX0 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC24.66■■□□□ 1.54
UBQLN1Q9UMX0 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC24.66■■□□□ 1.54
UBQLN1Q9UMX0 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
UBQLN1Q9UMX0 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC24.65■■□□□ 1.54
UBQLN1Q9UMX0 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
UBQLN1Q9UMX0 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
UBQLN1Q9UMX0 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC24.65■■□□□ 1.54
UBQLN1Q9UMX0 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
UBQLN1Q9UMX0 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC24.65■■□□□ 1.54
UBQLN1Q9UMX0 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC24.64■■□□□ 1.54
UBQLN1Q9UMX0 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
UBQLN1Q9UMX0 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC24.64■■□□□ 1.54
UBQLN1Q9UMX0 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
UBQLN1Q9UMX0 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
UBQLN1Q9UMX0 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
UBQLN1Q9UMX0 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
UBQLN1Q9UMX0 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
UBQLN1Q9UMX0 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC24.63■■□□□ 1.53
UBQLN1Q9UMX0 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC24.63■■□□□ 1.53
UBQLN1Q9UMX0 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC24.63■■□□□ 1.53
UBQLN1Q9UMX0 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC24.63■■□□□ 1.53
UBQLN1Q9UMX0 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC24.63■■□□□ 1.53
UBQLN1Q9UMX0 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC24.63■■□□□ 1.53
UBQLN1Q9UMX0 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
UBQLN1Q9UMX0 ALDH1A3-203ENST00000557963 1670 ntBASIC24.62■■□□□ 1.53
UBQLN1Q9UMX0 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC24.62■■□□□ 1.53
UBQLN1Q9UMX0 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
UBQLN1Q9UMX0 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC24.62■■□□□ 1.53
UBQLN1Q9UMX0 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC24.62■■□□□ 1.53
UBQLN1Q9UMX0 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
UBQLN1Q9UMX0 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC24.62■■□□□ 1.53
UBQLN1Q9UMX0 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
UBQLN1Q9UMX0 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC24.62■■□□□ 1.53
UBQLN1Q9UMX0 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC24.62■■□□□ 1.53
UBQLN1Q9UMX0 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
UBQLN1Q9UMX0 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC24.61■■□□□ 1.53
UBQLN1Q9UMX0 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
UBQLN1Q9UMX0 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
UBQLN1Q9UMX0 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
UBQLN1Q9UMX0 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC24.61■■□□□ 1.53
UBQLN1Q9UMX0 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC24.61■■□□□ 1.53
UBQLN1Q9UMX0 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
UBQLN1Q9UMX0 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
UBQLN1Q9UMX0 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
UBQLN1Q9UMX0 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC24.6■■□□□ 1.53
UBQLN1Q9UMX0 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC24.6■■□□□ 1.53
UBQLN1Q9UMX0 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC24.6■■□□□ 1.53
UBQLN1Q9UMX0 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
UBQLN1Q9UMX0 MTURN-203ENST00000409688 843 ntTSL 2 BASIC24.59■■□□□ 1.53
UBQLN1Q9UMX0 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC24.59■■□□□ 1.53
UBQLN1Q9UMX0 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC24.59■■□□□ 1.53
UBQLN1Q9UMX0 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
UBQLN1Q9UMX0 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
UBQLN1Q9UMX0 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC24.58■■□□□ 1.53
UBQLN1Q9UMX0 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
UBQLN1Q9UMX0 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC24.58■■□□□ 1.53
UBQLN1Q9UMX0 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC24.58■■□□□ 1.53
UBQLN1Q9UMX0 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.52
UBQLN1Q9UMX0 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC24.57■■□□□ 1.52
UBQLN1Q9UMX0 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
UBQLN1Q9UMX0 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC24.57■■□□□ 1.52
UBQLN1Q9UMX0 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
Retrieved 100 of 98,524 protein–RNA pairs in 18.2 ms