Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC20.7■□□□□ 0.9
SNX18Q96RF0 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
SNX18Q96RF0 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC20.7■□□□□ 0.9
SNX18Q96RF0 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
SNX18Q96RF0 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC20.7■□□□□ 0.9
SNX18Q96RF0 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC20.7■□□□□ 0.9
SNX18Q96RF0 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SNX18Q96RF0 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SNX18Q96RF0 AC090877.2-201ENST00000558441 1738 ntBASIC20.7■□□□□ 0.9
SNX18Q96RF0 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC20.7■□□□□ 0.9
SNX18Q96RF0 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SNX18Q96RF0 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC20.7■□□□□ 0.9
SNX18Q96RF0 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SNX18Q96RF0 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SNX18Q96RF0 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SNX18Q96RF0 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SNX18Q96RF0 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SNX18Q96RF0 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SNX18Q96RF0 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SNX18Q96RF0 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SNX18Q96RF0 DUX4L9-201ENST00000449051 1259 ntBASIC20.69■□□□□ 0.9
SNX18Q96RF0 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC20.69■□□□□ 0.9
SNX18Q96RF0 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC20.69■□□□□ 0.9
SNX18Q96RF0 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SNX18Q96RF0 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SNX18Q96RF0 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SNX18Q96RF0 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC20.68■□□□□ 0.9
SNX18Q96RF0 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SNX18Q96RF0 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SNX18Q96RF0 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC20.68■□□□□ 0.9
SNX18Q96RF0 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC20.68■□□□□ 0.9
SNX18Q96RF0 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SNX18Q96RF0 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SNX18Q96RF0 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
SNX18Q96RF0 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SNX18Q96RF0 AL161729.1-201ENST00000604104 1402 ntBASIC20.67■□□□□ 0.9
SNX18Q96RF0 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC20.67■□□□□ 0.9
SNX18Q96RF0 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SNX18Q96RF0 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SNX18Q96RF0 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SNX18Q96RF0 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC20.67■□□□□ 0.9
SNX18Q96RF0 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
SNX18Q96RF0 AL117328.2-201ENST00000624617 1940 ntBASIC20.66■□□□□ 0.9
SNX18Q96RF0 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
SNX18Q96RF0 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
SNX18Q96RF0 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC20.66■□□□□ 0.9
SNX18Q96RF0 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
SNX18Q96RF0 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC20.66■□□□□ 0.9
SNX18Q96RF0 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
SNX18Q96RF0 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC20.65■□□□□ 0.9
SNX18Q96RF0 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
SNX18Q96RF0 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SNX18Q96RF0 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC20.65■□□□□ 0.9
SNX18Q96RF0 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC20.65■□□□□ 0.9
SNX18Q96RF0 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SNX18Q96RF0 MED17-221ENST00000639724 2317 ntTSL 5 BASIC20.65■□□□□ 0.9
SNX18Q96RF0 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SNX18Q96RF0 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
SNX18Q96RF0 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SNX18Q96RF0 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
SNX18Q96RF0 LONRF2P2-201ENST00000439212 571 ntBASIC20.64■□□□□ 0.89
SNX18Q96RF0 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC20.64■□□□□ 0.89
SNX18Q96RF0 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SNX18Q96RF0 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
SNX18Q96RF0 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC20.63■□□□□ 0.89
SNX18Q96RF0 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC20.63■□□□□ 0.89
SNX18Q96RF0 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
SNX18Q96RF0 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
SNX18Q96RF0 RARRES2P1-201ENST00000474487 481 ntBASIC20.63■□□□□ 0.89
SNX18Q96RF0 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC20.63■□□□□ 0.89
SNX18Q96RF0 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SNX18Q96RF0 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC20.63■□□□□ 0.89
SNX18Q96RF0 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC20.63■□□□□ 0.89
SNX18Q96RF0 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SNX18Q96RF0 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
SNX18Q96RF0 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
SNX18Q96RF0 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SNX18Q96RF0 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC20.62■□□□□ 0.89
SNX18Q96RF0 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SNX18Q96RF0 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SNX18Q96RF0 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SNX18Q96RF0 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SNX18Q96RF0 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SNX18Q96RF0 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SNX18Q96RF0 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
SNX18Q96RF0 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
SNX18Q96RF0 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SNX18Q96RF0 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC20.62■□□□□ 0.89
SNX18Q96RF0 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
SNX18Q96RF0 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SNX18Q96RF0 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SNX18Q96RF0 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SNX18Q96RF0 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC20.61■□□□□ 0.89
SNX18Q96RF0 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
SNX18Q96RF0 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SNX18Q96RF0 ME2-208ENST00000638937 2471 ntTSL 5 BASIC20.61■□□□□ 0.89
SNX18Q96RF0 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SNX18Q96RF0 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
SNX18Q96RF0 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
SNX18Q96RF0 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms