Protein–RNA interactions for Protein: Q71RC2

LARP4, La-related protein 4, humanhuman

Known RBP eCLIP

Length 724 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LARP4Q71RC2 BCL2L12-205ENST00000594793 311 ntTSL 313.25□□□□□ -0.299e-9■■■■□ 26.2
LARP4Q71RC2 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.372e-7■■■■□ 26.1
LARP4Q71RC2 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.073e-6■■■■□ 26.1
LARP4Q71RC2 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.993e-6■■■■□ 26.1
LARP4Q71RC2 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.886e-6■■■■□ 26.1
LARP4Q71RC2 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC19.69■□□□□ 0.743e-6■■■■□ 26.1
LARP4Q71RC2 PPP5C-213ENST00000527623 1215 ntTSL 219.25■□□□□ 0.673e-6■■■■□ 26.1
LARP4Q71RC2 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC19.1■□□□□ 0.657e-8■■■■□ 26.1
LARP4Q71RC2 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC18.35■□□□□ 0.536e-6■■■■□ 26.1
LARP4Q71RC2 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.537e-8■■■■□ 26.1
LARP4Q71RC2 TIMM17B-207ENST00000490755 666 ntTSL 517.87■□□□□ 0.452e-6■■■■□ 26.1
LARP4Q71RC2 PPP5C-211ENST00000525507 1300 ntTSL 217.82■□□□□ 0.443e-6■■■■□ 26.1
LARP4Q71RC2 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC17.36■□□□□ 0.376e-6■■■■□ 26.1
LARP4Q71RC2 HMBS-226ENST00000640813 1283 ntTSL 517.06■□□□□ 0.326e-6■■■■□ 26.1
LARP4Q71RC2 PPP5C-206ENST00000486994 2209 ntTSL 217.06■□□□□ 0.323e-6■■■■□ 26.1
LARP4Q71RC2 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC16.94■□□□□ 0.36e-6■■■■□ 26.1
LARP4Q71RC2 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC16.87■□□□□ 0.297e-8■■■■□ 26.1
LARP4Q71RC2 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC16.64■□□□□ 0.257e-8■■■■□ 26.1
LARP4Q71RC2 APLP2-207ENST00000525604 1590 ntTSL 216.32■□□□□ 0.28e-12■■■■□ 26.1
LARP4Q71RC2 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC16■□□□□ 0.156e-6■■■■□ 26.1
LARP4Q71RC2 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.082e-6■■■■□ 26.1
LARP4Q71RC2 HMBS-224ENST00000546226 2112 ntTSL 215.34■□□□□ 0.056e-6■■■■□ 26.1
LARP4Q71RC2 PPP5C-207ENST00000487483 4675 ntTSL 514.49□□□□□ -0.093e-6■■■■□ 26.1
LARP4Q71RC2 PPP5C-205ENST00000478046 1886 ntTSL 1 (best)14.43□□□□□ -0.13e-6■■■■□ 26.1
LARP4Q71RC2 B4GALT3-205ENST00000466504 839 ntTSL 313.63□□□□□ -0.236e-6■■■■□ 26.1
LARP4Q71RC2 B4GALT3-204ENST00000465740 776 ntTSL 213.47□□□□□ -0.256e-6■■■■□ 26.1
LARP4Q71RC2 HMBS-216ENST00000543090 1347 ntTSL 5 BASIC12.44□□□□□ -0.426e-6■■■■□ 26.1
LARP4Q71RC2 HMBS-202ENST00000392841 1411 ntTSL 1 (best) BASIC12.06□□□□□ -0.486e-6■■■■□ 26.1
LARP4Q71RC2 RPSA-208ENST00000487876 572 ntTSL 411.78□□□□□ -0.526e-6■■■■□ 26.1
LARP4Q71RC2 URGCP-MRPS24-201ENST00000603700 795 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.587e-8■■■■□ 26.1
LARP4Q71RC2 PNPLA4-201ENST00000381042 3372 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.626e-6■■■■□ 26.1
LARP4Q71RC2 MTA2-202ENST00000524902 2577 ntTSL 1 (best) BASIC10.96□□□□□ -0.662e-6■■■■□ 26.1
LARP4Q71RC2 HMBS-217ENST00000543543 1796 ntTSL 510.73□□□□□ -0.696e-6■■■■□ 26.1
LARP4Q71RC2 RPSA-204ENST00000458478 874 ntTSL 210.22□□□□□ -0.776e-6■■■■□ 26.1
LARP4Q71RC2 C14orf2-210ENST00000555030 749 ntTSL 3 BASIC9.31□□□□□ -0.927e-11■■■■□ 26.1
LARP4Q71RC2 RPSA-201ENST00000301821 1171 ntAPPRIS P3 TSL 1 (best) BASIC9.15□□□□□ -0.946e-6■■■■□ 26.1
LARP4Q71RC2 HMBS-210ENST00000539045 845 ntTSL 28.99□□□□□ -0.976e-6■■■■□ 26.1
LARP4Q71RC2 PNPLA4-202ENST00000442940 652 ntTSL 28.71□□□□□ -1.026e-6■■■■□ 26.1
LARP4Q71RC2 C14orf2-201ENST00000286953 643 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.077e-11■■■■□ 26.1
LARP4Q71RC2 RPSA-206ENST00000477325 596 ntTSL 28.25□□□□□ -1.096e-6■■■■□ 26.1
LARP4Q71RC2 C14orf2-203ENST00000553430 1659 ntTSL 1 (best) BASIC7.95□□□□□ -1.147e-11■■■■□ 26.1
LARP4Q71RC2 C14orf2-202ENST00000414262 842 ntTSL 1 (best) BASIC7.47□□□□□ -1.217e-11■■■■□ 26.1
LARP4Q71RC2 C14orf2-204ENST00000553449 271 ntTSL 27.05□□□□□ -1.287e-11■■■■□ 26.1
LARP4Q71RC2 RPSA-202ENST00000443003 1032 ntAPPRIS ALT1 TSL 1 (best) BASIC6.86□□□□□ -1.316e-6■■■■□ 26.1
LARP4Q71RC2 C14orf2-206ENST00000554287 361 ntTSL 36.8□□□□□ -1.327e-11■■■■□ 26.1
LARP4Q71RC2 C14orf2-209ENST00000554880 707 ntAPPRIS P1 TSL 3 BASIC6.75□□□□□ -1.337e-11■■■■□ 26.1
LARP4Q71RC2 C14orf2-211ENST00000557040 472 ntAPPRIS P1 TSL 3 BASIC6.11□□□□□ -1.437e-11■■■■□ 26.1
LARP4Q71RC2 PNPLA4-204ENST00000537427 2559 ntTSL 2 BASIC5.91□□□□□ -1.466e-6■■■■□ 26.1
LARP4Q71RC2 RPSA-205ENST00000475346 622 ntTSL 1 (best)5.87□□□□□ -1.476e-6■■■■□ 26.1
LARP4Q71RC2 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC5.6□□□□□ -1.516e-6■■■■□ 26.1
LARP4Q71RC2 RNU2-36P-201ENST00000410361 191 ntBASIC4.37□□□□□ -1.716e-6■■■■□ 26.1
LARP4Q71RC2 RNF126-207ENST00000605891 1671 ntTSL 529.09■■■□□ 2.256e-7■■■■□ 26
LARP4Q71RC2 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC28.28■■■□□ 2.126e-7■■■■□ 26
LARP4Q71RC2 C11orf68-201ENST00000438576 1619 ntAPPRIS ALT2 TSL 2 BASIC28.02■■■□□ 2.086e-7■■■■□ 26
LARP4Q71RC2 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.986e-7■■■■□ 26
LARP4Q71RC2 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.586e-7■■■■□ 26
LARP4Q71RC2 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.916e-7■■■■□ 26
LARP4Q71RC2 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.896e-7■■■■□ 26
LARP4Q71RC2 RNF126-202ENST00000586749 2092 ntTSL 220.3■□□□□ 0.846e-7■■■■□ 26
LARP4Q71RC2 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.86e-7■■■■□ 26
LARP4Q71RC2 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.746e-7■■■■□ 26
LARP4Q71RC2 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.536e-7■■■■□ 26
LARP4Q71RC2 RPS6KB2-209ENST00000528964 1806 ntTSL 517.66■□□□□ 0.426e-7■■■■□ 26
LARP4Q71RC2 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.416e-7■■■■□ 26
LARP4Q71RC2 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC17.59■□□□□ 0.416e-7■■■■□ 26
LARP4Q71RC2 RNF126-204ENST00000590885 1436 ntTSL 517.2■□□□□ 0.346e-7■■■■□ 26
LARP4Q71RC2 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC16.4■□□□□ 0.226e-7■■■■□ 26
LARP4Q71RC2 RNASEH2C-204ENST00000530192 576 ntTSL 216.23■□□□□ 0.196e-7■■■■□ 26
LARP4Q71RC2 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.186e-7■■■■□ 26
LARP4Q71RC2 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.156e-7■■■■□ 26
LARP4Q71RC2 CDCA5-205ENST00000524733 835 ntTSL 315.58■□□□□ 0.086e-7■■■■□ 26
LARP4Q71RC2 CDCA5-208ENST00000529290 789 ntTSL 515.55■□□□□ 0.086e-7■■■■□ 26
LARP4Q71RC2 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC14.26□□□□□ -0.136e-7■■■■□ 26
LARP4Q71RC2 RPS6KB2-205ENST00000525088 5528 ntTSL 213.55□□□□□ -0.246e-7■■■■□ 26
LARP4Q71RC2 SATB2-211ENST00000614512 4972 ntTSL 5 BASIC13.36□□□□□ -0.276e-7■■■■□ 26
LARP4Q71RC2 SATB2-201ENST00000260926 5318 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.386e-7■■■■□ 26
LARP4Q71RC2 ERI3-204ENST00000456170 1103 ntTSL 511.95□□□□□ -0.56e-7■■■■□ 26
LARP4Q71RC2 CDCA5-210ENST00000533015 563 ntTSL 210.86□□□□□ -0.676e-7■■■■□ 26
LARP4Q71RC2 CDCA5-206ENST00000525464 672 ntTSL 59.99□□□□□ -0.816e-7■■■■□ 26
LARP4Q71RC2 SATB2-207ENST00000463386 372 ntTSL 49.94□□□□□ -0.826e-7■■■■□ 26
LARP4Q71RC2 ERI3-202ENST00000372259 1332 ntTSL 5 BASIC9.48□□□□□ -0.896e-7■■■■□ 26
LARP4Q71RC2 RBX1-203ENST00000476110 574 ntTSL 29.33□□□□□ -0.926e-7■■■■□ 26
LARP4Q71RC2 PRRC2A-213ENST00000487839 1071 ntTSL 58.87□□□□□ -0.996e-7■■■■□ 26
LARP4Q71RC2 PSMG1-205ENST00000481921 716 ntTSL 25.8□□□□□ -1.486e-7■■■■□ 26
LARP4Q71RC2 AP001347.1-203ENST00000448463 780 ntTSL 211.88□□□□□ -0.512e-6■■■■□ 26
LARP4Q71RC2 AP001347.1-201ENST00000428809 1332 ntTSL 1 (best) BASIC7.37□□□□□ -1.232e-11■■■■□ 26
LARP4Q71RC2 AP001347.1-202ENST00000432621 1084 ntTSL 1 (best)7.36□□□□□ -1.232e-11■■■■□ 26
LARP4Q71RC2 TUBB4B-202ENST00000604929 2035 ntTSL 1 (best)18.78■□□□□ 0.62e-8■■■■□ 26
LARP4Q71RC2 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.022e-8■■■■□ 26
LARP4Q71RC2 STRN4-222ENST00000601869 2240 nt19.6■□□□□ 0.733e-10■■■■□ 25.9
LARP4Q71RC2 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC18.8■□□□□ 0.63e-10■■■■□ 25.9
LARP4Q71RC2 STRN4-208ENST00000594581 2692 ntTSL 217.94■□□□□ 0.463e-10■■■■□ 25.9
LARP4Q71RC2 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.433e-10■■■■□ 25.9
LARP4Q71RC2 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC20.02■□□□□ 0.82e-11■■■■□ 25.9
LARP4Q71RC2 TMEM179B-204ENST00000532586 839 ntTSL 215.23■□□□□ 0.032e-11■■■■□ 25.9
LARP4Q71RC2 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.022e-11■■■■□ 25.9
LARP4Q71RC2 AP1M2-203ENST00000589348 510 ntTSL 316.71■□□□□ 0.277e-7■■■■□ 25.9
LARP4Q71RC2 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.17e-7■■■■□ 25.9
LARP4Q71RC2 AP1M2-201ENST00000250244 1749 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.177e-7■■■■□ 25.9
LARP4Q71RC2 AP1M2-202ENST00000587069 544 ntTSL 212.58□□□□□ -0.47e-7■■■■□ 25.9
Retrieved 100 of 15,922 protein–RNA pairs in 647.3 ms