Protein–RNA interactions for Protein: Q6P499

NIPAL3, NIPA-like protein 3, humanhuman

Predictions only

Length 406 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3Q6P499 SSSCA1-AS1-201ENST00000567594 614 ntBASIC20.79■□□□□ 0.92
NIPAL3Q6P499 MIR4508-201ENST00000584178 70 ntBASIC20.79■□□□□ 0.92
NIPAL3Q6P499 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
NIPAL3Q6P499 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC20.79■□□□□ 0.92
NIPAL3Q6P499 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC20.79■□□□□ 0.92
NIPAL3Q6P499 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
NIPAL3Q6P499 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
NIPAL3Q6P499 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC20.78■□□□□ 0.92
NIPAL3Q6P499 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
NIPAL3Q6P499 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
NIPAL3Q6P499 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
NIPAL3Q6P499 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
NIPAL3Q6P499 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
NIPAL3Q6P499 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
NIPAL3Q6P499 AC103834.1-201ENST00000520383 144 ntBASIC20.78■□□□□ 0.92
NIPAL3Q6P499 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
NIPAL3Q6P499 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC20.78■□□□□ 0.92
NIPAL3Q6P499 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC20.78■□□□□ 0.92
NIPAL3Q6P499 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
NIPAL3Q6P499 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
NIPAL3Q6P499 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
NIPAL3Q6P499 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC20.78■□□□□ 0.92
NIPAL3Q6P499 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC20.77■□□□□ 0.92
NIPAL3Q6P499 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC20.77■□□□□ 0.92
NIPAL3Q6P499 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
NIPAL3Q6P499 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC20.77■□□□□ 0.92
NIPAL3Q6P499 AC090877.2-201ENST00000558441 1738 ntBASIC20.77■□□□□ 0.92
NIPAL3Q6P499 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC20.77■□□□□ 0.92
NIPAL3Q6P499 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
NIPAL3Q6P499 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC20.77■□□□□ 0.92
NIPAL3Q6P499 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
NIPAL3Q6P499 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.91
NIPAL3Q6P499 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC20.77■□□□□ 0.91
NIPAL3Q6P499 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
NIPAL3Q6P499 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC20.76■□□□□ 0.91
NIPAL3Q6P499 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
NIPAL3Q6P499 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
NIPAL3Q6P499 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC20.76■□□□□ 0.91
NIPAL3Q6P499 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
NIPAL3Q6P499 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
NIPAL3Q6P499 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC20.76■□□□□ 0.91
NIPAL3Q6P499 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
NIPAL3Q6P499 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
NIPAL3Q6P499 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
NIPAL3Q6P499 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
NIPAL3Q6P499 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
NIPAL3Q6P499 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
NIPAL3Q6P499 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
NIPAL3Q6P499 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
NIPAL3Q6P499 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
NIPAL3Q6P499 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
NIPAL3Q6P499 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC20.74■□□□□ 0.91
NIPAL3Q6P499 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
NIPAL3Q6P499 AC120024.1-201ENST00000562672 995 ntBASIC20.74■□□□□ 0.91
NIPAL3Q6P499 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
NIPAL3Q6P499 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC20.74■□□□□ 0.91
NIPAL3Q6P499 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
NIPAL3Q6P499 C9orf163-202ENST00000624034 2573 ntBASIC20.74■□□□□ 0.91
NIPAL3Q6P499 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
NIPAL3Q6P499 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC20.74■□□□□ 0.91
NIPAL3Q6P499 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
NIPAL3Q6P499 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
NIPAL3Q6P499 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
NIPAL3Q6P499 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC20.73■□□□□ 0.91
NIPAL3Q6P499 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
NIPAL3Q6P499 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC20.73■□□□□ 0.91
NIPAL3Q6P499 THA1P-201ENST00000590384 1145 ntBASIC20.73■□□□□ 0.91
NIPAL3Q6P499 AC011551.1-201ENST00000614101 683 ntBASIC20.73■□□□□ 0.91
NIPAL3Q6P499 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
NIPAL3Q6P499 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
NIPAL3Q6P499 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC20.72■□□□□ 0.91
NIPAL3Q6P499 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC20.72■□□□□ 0.91
NIPAL3Q6P499 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC20.72■□□□□ 0.91
NIPAL3Q6P499 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
NIPAL3Q6P499 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC20.72■□□□□ 0.91
NIPAL3Q6P499 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
NIPAL3Q6P499 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
NIPAL3Q6P499 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
NIPAL3Q6P499 AC079834.2-201ENST00000609776 1949 ntBASIC20.71■□□□□ 0.91
NIPAL3Q6P499 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
NIPAL3Q6P499 KRT18P24-201ENST00000344739 1156 ntBASIC20.71■□□□□ 0.91
NIPAL3Q6P499 RARRES2P1-201ENST00000474487 481 ntBASIC20.71■□□□□ 0.91
NIPAL3Q6P499 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
NIPAL3Q6P499 AC103724.3-201ENST00000564481 992 ntBASIC20.71■□□□□ 0.91
NIPAL3Q6P499 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC20.71■□□□□ 0.91
NIPAL3Q6P499 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
NIPAL3Q6P499 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
NIPAL3Q6P499 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.91
NIPAL3Q6P499 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
NIPAL3Q6P499 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
NIPAL3Q6P499 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC20.7■□□□□ 0.9
NIPAL3Q6P499 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC20.7■□□□□ 0.9
NIPAL3Q6P499 GAK-223ENST00000628912 497 ntTSL 5 BASIC20.7■□□□□ 0.9
NIPAL3Q6P499 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
NIPAL3Q6P499 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC20.7■□□□□ 0.9
NIPAL3Q6P499 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC20.7■□□□□ 0.9
NIPAL3Q6P499 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC20.7■□□□□ 0.9
NIPAL3Q6P499 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
NIPAL3Q6P499 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
NIPAL3Q6P499 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms