Protein–RNA interactions for Protein: P78345

RPP38, Ribonuclease P protein subunit p38, humanhuman

Known RBP Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPP38P78345 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
RPP38P78345 ME2-208ENST00000638937 2471 ntTSL 5 BASIC21.54■■□□□ 1.04
RPP38P78345 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
RPP38P78345 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC21.54■■□□□ 1.04
RPP38P78345 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
RPP38P78345 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
RPP38P78345 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
RPP38P78345 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
RPP38P78345 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC21.54■■□□□ 1.04
RPP38P78345 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC21.54■■□□□ 1.04
RPP38P78345 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
RPP38P78345 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
RPP38P78345 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC21.53■■□□□ 1.04
RPP38P78345 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC21.53■■□□□ 1.04
RPP38P78345 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
RPP38P78345 PRTG-204ENST00000561292 833 ntTSL 3 BASIC21.53■■□□□ 1.04
RPP38P78345 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
RPP38P78345 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
RPP38P78345 ABCB10P4-201ENST00000566803 2184 ntBASIC21.53■■□□□ 1.04
RPP38P78345 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
RPP38P78345 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
RPP38P78345 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC21.52■■□□□ 1.04
RPP38P78345 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
RPP38P78345 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
RPP38P78345 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
RPP38P78345 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC21.52■■□□□ 1.04
RPP38P78345 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC21.52■■□□□ 1.04
RPP38P78345 GAK-223ENST00000628912 497 ntTSL 5 BASIC21.52■■□□□ 1.04
RPP38P78345 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
RPP38P78345 AC090877.2-201ENST00000558441 1738 ntBASIC21.52■■□□□ 1.03
RPP38P78345 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
RPP38P78345 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
RPP38P78345 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
RPP38P78345 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
RPP38P78345 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
RPP38P78345 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
RPP38P78345 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
RPP38P78345 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC21.51■■□□□ 1.03
RPP38P78345 AC009299.2-201ENST00000482477 511 ntBASIC21.51■■□□□ 1.03
RPP38P78345 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
RPP38P78345 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
RPP38P78345 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
RPP38P78345 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
RPP38P78345 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
RPP38P78345 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
RPP38P78345 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
RPP38P78345 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC21.5■■□□□ 1.03
RPP38P78345 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC21.5■■□□□ 1.03
RPP38P78345 BX664725.1-201ENST00000438252 379 ntBASIC21.5■■□□□ 1.03
RPP38P78345 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC21.5■■□□□ 1.03
RPP38P78345 AL035685.1-201ENST00000636663 812 ntBASIC21.5■■□□□ 1.03
RPP38P78345 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC21.5■■□□□ 1.03
RPP38P78345 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC21.5■■□□□ 1.03
RPP38P78345 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
RPP38P78345 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC21.49■■□□□ 1.03
RPP38P78345 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
RPP38P78345 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC21.49■■□□□ 1.03
RPP38P78345 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
RPP38P78345 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC21.49■■□□□ 1.03
RPP38P78345 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC21.49■■□□□ 1.03
RPP38P78345 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
RPP38P78345 RNF146-205ENST00000477776 762 ntTSL 3 BASIC21.49■■□□□ 1.03
RPP38P78345 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC21.49■■□□□ 1.03
RPP38P78345 Z92544.1-202ENST00000571933 1220 ntBASIC21.49■■□□□ 1.03
RPP38P78345 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
RPP38P78345 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
RPP38P78345 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
RPP38P78345 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
RPP38P78345 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC21.48■■□□□ 1.03
RPP38P78345 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC21.48■■□□□ 1.03
RPP38P78345 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
RPP38P78345 MIR4281-201ENST00000580852 62 ntBASIC21.48■■□□□ 1.03
RPP38P78345 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
RPP38P78345 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
RPP38P78345 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
RPP38P78345 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
RPP38P78345 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC21.47■■□□□ 1.03
RPP38P78345 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
RPP38P78345 KRT125P-201ENST00000546827 989 ntBASIC21.47■■□□□ 1.03
RPP38P78345 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC21.47■■□□□ 1.03
RPP38P78345 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
RPP38P78345 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
RPP38P78345 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
RPP38P78345 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
RPP38P78345 SHD-204ENST00000599689 1729 ntTSL 5 BASIC21.46■■□□□ 1.03
RPP38P78345 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
RPP38P78345 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
RPP38P78345 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
RPP38P78345 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
RPP38P78345 C9orf163-202ENST00000624034 2573 ntBASIC21.46■■□□□ 1.03
RPP38P78345 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
RPP38P78345 LSR-205ENST00000427250 1606 ntTSL 2 BASIC21.46■■□□□ 1.03
RPP38P78345 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC21.46■■□□□ 1.03
RPP38P78345 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
RPP38P78345 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
RPP38P78345 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
RPP38P78345 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC21.46■■□□□ 1.03
RPP38P78345 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
RPP38P78345 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.03
RPP38P78345 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 80.5 ms