Protein–RNA interactions for Protein: P23246

SFPQ, Splicing factor, proline- and glutamine-rich, humanhuman

Known RBP eCLIP

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFPQP23246 PVT1-201ENST00000504719 754 ntTSL 228.3■■■□□ 2.126e-6■■□□□ 14.5
SFPQP23246 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC27.27■■□□□ 1.966e-6■■□□□ 14.5
SFPQP23246 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC25.7■■□□□ 1.76e-6■■□□□ 14.5
SFPQP23246 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC23.7■■□□□ 1.386e-6■■□□□ 14.5
SFPQP23246 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC23.54■■□□□ 1.366e-6■■□□□ 14.5
SFPQP23246 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.176e-6■■□□□ 14.5
SFPQP23246 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.166e-6■■□□□ 14.5
SFPQP23246 HNRNPUL1-219ENST00000601336 754 ntTSL 221.44■■□□□ 1.026e-6■■□□□ 14.5
SFPQP23246 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC21.26■□□□□ 0.996e-6■■□□□ 14.5
SFPQP23246 CTTN-204ENST00000393747 1315 ntTSL 520.14■□□□□ 0.816e-6■■□□□ 14.5
SFPQP23246 AFF1-208ENST00000511722 638 ntTSL 420.14■□□□□ 0.816e-6■■□□□ 14.5
SFPQP23246 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC19.68■□□□□ 0.746e-6■■□□□ 14.5
SFPQP23246 ZNF292-203ENST00000369578 1732 ntTSL 218.83■□□□□ 0.616e-6■■□□□ 14.5
SFPQP23246 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC18.5■□□□□ 0.556e-6■■□□□ 14.5
SFPQP23246 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.466e-6■■□□□ 14.5
SFPQP23246 CCDC85C-206ENST00000557576 656 ntTSL 217.85■□□□□ 0.456e-6■■□□□ 14.5
SFPQP23246 CTTN-212ENST00000527962 587 ntTSL 217.75■□□□□ 0.436e-6■■□□□ 14.5
SFPQP23246 HNRNPUL1-208ENST00000595196 3043 ntTSL 1 (best)17.67■□□□□ 0.426e-6■■□□□ 14.5
SFPQP23246 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC17.09■□□□□ 0.336e-6■■□□□ 14.5
SFPQP23246 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC17.03■□□□□ 0.326e-6■■□□□ 14.5
SFPQP23246 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.266e-6■■□□□ 14.5
SFPQP23246 HNRNPUL1-214ENST00000599719 1473 ntTSL 1 (best)16.57■□□□□ 0.246e-6■■□□□ 14.5
SFPQP23246 PSMB7-206ENST00000498485 967 ntTSL 515.96■□□□□ 0.156e-6■■□□□ 14.5
SFPQP23246 HNRNPUL1-204ENST00000392006 3555 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.116e-6■■□□□ 14.5
SFPQP23246 CTTN-201ENST00000301843 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.116e-6■■□□□ 14.5
SFPQP23246 HNRNPUL1-207ENST00000595018 2794 ntTSL 2 BASIC15.57■□□□□ 0.086e-6■■□□□ 14.5
SFPQP23246 RNA5SP84-201ENST00000364740 107 ntBASIC14.49□□□□□ -0.096e-6■■□□□ 14.5
SFPQP23246 HNRNPUL1-202ENST00000352456 3426 ntTSL 1 (best) BASIC13.87□□□□□ -0.196e-6■■□□□ 14.5
SFPQP23246 CCDC85C-202ENST00000554877 543 ntTSL 413.76□□□□□ -0.216e-6■■□□□ 14.5
SFPQP23246 CTTN-210ENST00000525852 1470 ntTSL 513.65□□□□□ -0.226e-6■■□□□ 14.5
SFPQP23246 HNRNPUL1-218ENST00000601309 672 ntTSL 513.55□□□□□ -0.246e-6■■□□□ 14.5
SFPQP23246 HNRNPUL1-206ENST00000594207 816 ntTSL 513.27□□□□□ -0.296e-6■■□□□ 14.5
SFPQP23246 PVT1-215ENST00000522963 568 ntTSL 413.07□□□□□ -0.326e-6■■□□□ 14.5
SFPQP23246 CCDC85C-205ENST00000556348 556 ntTSL 512.85□□□□□ -0.356e-6■■□□□ 14.5
SFPQP23246 CTTN-208ENST00000498223 523 ntTSL 312.61□□□□□ -0.396e-6■■□□□ 14.5
SFPQP23246 PVT1-216ENST00000523068 844 ntTSL 5 BASIC12.2□□□□□ -0.466e-6■■□□□ 14.5
SFPQP23246 CCDC85C-203ENST00000554996 619 ntTSL 411.48□□□□□ -0.576e-6■■□□□ 14.5
SFPQP23246 ARHGAP5-204ENST00000432921 5003 ntTSL 5 BASIC11.42□□□□□ -0.586e-6■■□□□ 14.5
SFPQP23246 PSMB7-201ENST00000259457 980 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.66e-6■■□□□ 14.5
SFPQP23246 AFF1-210ENST00000514970 582 ntTSL 311.11□□□□□ -0.636e-6■■□□□ 14.5
SFPQP23246 HNRNPUL1-211ENST00000597725 573 ntTSL 411.09□□□□□ -0.636e-6■■□□□ 14.5
SFPQP23246 UBE2N-205ENST00000550657 3018 ntTSL 2 BASIC10.6□□□□□ -0.716e-6■■□□□ 14.5
SFPQP23246 UBE2N-206ENST00000552442 607 ntTSL 5 BASIC10.08□□□□□ -0.86e-6■■□□□ 14.5
SFPQP23246 PVT1-207ENST00000518528 624 ntTSL 310.07□□□□□ -0.86e-6■■□□□ 14.5
SFPQP23246 UBE2N-203ENST00000549490 676 ntTSL 210.06□□□□□ -0.86e-6■■□□□ 14.5
SFPQP23246 SRPK2-214ENST00000489828 2560 ntAPPRIS P3 TSL 1 (best) BASIC9.91□□□□□ -0.826e-6■■□□□ 14.5
SFPQP23246 PVT1-210ENST00000521122 221 ntTSL 39.82□□□□□ -0.846e-6■■□□□ 14.5
SFPQP23246 CHST15-204ENST00000476765 436 ntTSL 39.17□□□□□ -0.946e-6■■□□□ 14.5
SFPQP23246 AFF1-211ENST00000544085 3644 ntAPPRIS ALT2 TSL 5 BASIC8.97□□□□□ -0.976e-6■■□□□ 14.5
SFPQP23246 SAMD5-202ENST00000566741 393 ntTSL 36.3□□□□□ -1.46e-6■■□□□ 14.5
SFPQP23246 ARHGAP5-211ENST00000557643 872 ntTSL 36.08□□□□□ -1.446e-6■■□□□ 14.5
SFPQP23246 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC5.86□□□□□ -1.476e-6■■□□□ 14.5
SFPQP23246 ARHGAP5-207ENST00000554090 543 ntTSL 55.79□□□□□ -1.486e-6■■□□□ 14.5
SFPQP23246 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC5.78□□□□□ -1.486e-6■■□□□ 14.5
SFPQP23246 PVT1-205ENST00000517790 599 ntTSL 25.41□□□□□ -1.546e-6■■□□□ 14.5
SFPQP23246 CCNY-206ENST00000470025 346 ntTSL 54.6□□□□□ -1.676e-6■■□□□ 14.5
SFPQP23246 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC3.61□□□□□ -1.836e-6■■□□□ 14.5
SFPQP23246 AL033504.1-202ENST00000432506 406 ntTSL 23.38□□□□□ -1.876e-6■■□□□ 14.5
SFPQP23246 AL033504.1-203ENST00000442094 404 ntTSL 33.08□□□□□ -1.926e-6■■□□□ 14.5
SFPQP23246 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.97□□□□□ -1.936e-6■■□□□ 14.5
SFPQP23246 RBMS1-214ENST00000491781 1533 ntTSL 1 (best)18.7■□□□□ 0.582e-6■■□□□ 14.5
SFPQP23246 RBMS1-201ENST00000348849 4273 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.012e-6■■□□□ 14.5
SFPQP23246 RBMS1-209ENST00000474820 4016 ntTSL 1 (best)5.46□□□□□ -1.542e-6■■□□□ 14.5
SFPQP23246 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.641e-6■■□□□ 14.5
SFPQP23246 STARD10-205ENST00000535267 579 ntTSL 228.93■■■□□ 2.225e-7■■□□□ 14.5
SFPQP23246 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC28.39■■■□□ 2.145e-7■■□□□ 14.5
SFPQP23246 STARD10-210ENST00000537947 1100 ntTSL 327.89■■■□□ 2.065e-7■■□□□ 14.5
SFPQP23246 STARD10-203ENST00000535054 460 ntTSL 327.88■■■□□ 2.055e-7■■□□□ 14.5
SFPQP23246 CXXC5-209ENST00000507139 472 ntTSL 424.36■■□□□ 1.495e-7■■□□□ 14.5
SFPQP23246 CXXC5-206ENST00000504844 777 ntTSL 223.69■■□□□ 1.385e-7■■□□□ 14.5
SFPQP23246 PTK2-257ENST00000524357 535 ntTSL 423.2■■□□□ 1.35e-7■■□□□ 14.5
SFPQP23246 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.35e-7■■□□□ 14.5
SFPQP23246 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.265e-7■■□□□ 14.5
SFPQP23246 STARD10-216ENST00000542989 839 ntTSL 322.66■■□□□ 1.225e-7■■□□□ 14.5
SFPQP23246 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC22.42■■□□□ 1.185e-7■■□□□ 14.5
SFPQP23246 CXXC5-203ENST00000502336 581 ntTSL 422.04■■□□□ 1.125e-7■■□□□ 14.5
SFPQP23246 STARD10-212ENST00000538437 747 ntTSL 221.11■□□□□ 0.975e-7■■□□□ 14.5
SFPQP23246 PTK2-218ENST00000519993 4388 ntTSL 1 (best)20.71■□□□□ 0.915e-7■■□□□ 14.5
SFPQP23246 PTK2-254ENST00000524040 475 ntTSL 220.66■□□□□ 0.95e-7■■□□□ 14.5
SFPQP23246 PTK2-231ENST00000521332 630 ntTSL 420.66■□□□□ 0.95e-7■■□□□ 14.5
SFPQP23246 PTK2-216ENST00000519881 863 ntTSL 3 BASIC20.49■□□□□ 0.875e-7■■□□□ 14.5
SFPQP23246 PTK2-219ENST00000520045 602 ntTSL 420.49■□□□□ 0.875e-7■■□□□ 14.5
SFPQP23246 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.835e-7■■□□□ 14.5
SFPQP23246 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.785e-7■■□□□ 14.5
SFPQP23246 STARD10-206ENST00000536290 438 ntTSL 519.39■□□□□ 0.695e-7■■□□□ 14.5
SFPQP23246 STARD10-214ENST00000539138 511 ntTSL 318.99■□□□□ 0.635e-7■■□□□ 14.5
SFPQP23246 CXXC5-202ENST00000502295 503 ntTSL 418.33■□□□□ 0.525e-7■■□□□ 14.5
SFPQP23246 STARD10-221ENST00000546314 620 ntTSL 317.79■□□□□ 0.445e-7■■□□□ 14.5
SFPQP23246 CXXC5-216ENST00000520967 878 ntTSL 317.66■□□□□ 0.425e-7■■□□□ 14.5
SFPQP23246 PTK2-202ENST00000395218 4415 ntTSL 5 BASIC15.97■□□□□ 0.155e-7■■□□□ 14.5
SFPQP23246 CXXC5-207ENST00000504944 568 ntTSL 315.82■□□□□ 0.125e-7■■□□□ 14.5
SFPQP23246 ARAP1-202ENST00000359373 5767 ntAPPRIS ALT2 TSL 2 BASIC15.73■□□□□ 0.115e-7■■□□□ 14.5
SFPQP23246 PTK2-225ENST00000520892 571 ntTSL 4 BASIC15.04■□□□□ -05e-7■■□□□ 14.5
SFPQP23246 PTK2-248ENST00000523675 650 ntTSL 39.46□□□□□ -0.95e-7■■□□□ 14.5
SFPQP23246 PTK2-252ENST00000523803 750 ntTSL 39.28□□□□□ -0.925e-7■■□□□ 14.5
SFPQP23246 PTK2-223ENST00000520828 574 ntTSL 49.11□□□□□ -0.955e-7■■□□□ 14.5
SFPQP23246 PTK2-234ENST00000521791 556 ntTSL 49.1□□□□□ -0.955e-7■■□□□ 14.5
SFPQP23246 PTK2-240ENST00000522684 4955 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.995e-7■■□□□ 14.5
SFPQP23246 PTK2-207ENST00000517887 4661 ntTSL 5 BASIC8.72□□□□□ -1.015e-7■■□□□ 14.5
SFPQP23246 PTK2-242ENST00000523067 488 ntTSL 48.53□□□□□ -1.045e-7■■□□□ 14.5
Retrieved 100 of 4,991 protein–RNA pairs in 423 ms