RNA–Protein interactions for RNA: ENST00000514970.2

AFF1-210, Transcript of AF4/FMR2 family member 1, humanhuman

TSL 3

Gene AFF1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFF1-210ENST00000514970 AEBP2Q6ZN18 517 aaPredicted RBP33.54■■■□□ 2.96
AFF1-210ENST00000514970 CHIC1Q5VXU3 224 aa32.26■■■□□ 2.75
AFF1-210ENST00000514970 SENP3Q9H4L4 574 aaPredicted RBP28.49■■■□□ 2.15
AFF1-210ENST00000514970 PHF23Q9BUL5 403 aaPredicted RBP28.35■■■□□ 2.13
AFF1-210ENST00000514970 FOXD1Q16676 465 aa26.53■■□□□ 1.84
AFF1-210ENST00000514970 PLPPR3Q6T4P5 718 aa25.96■■□□□ 1.75
AFF1-210ENST00000514970 PPP6R1Q9UPN7 881 aa25.18■■□□□ 1.62
AFF1-210ENST00000514970 ADRA2BP18089 450 aa25.11■■□□□ 1.61
AFF1-210ENST00000514970 PIAS4Q8N2W9 510 aaPredicted RBP24.88■■□□□ 1.57
AFF1-210ENST00000514970 NISCHQ9Y2I1 1504 aa24.62■■□□□ 1.53
AFF1-210ENST00000514970 MSH5O43196 834 aa24.62■■□□□ 1.53
AFF1-210ENST00000514970 POTEDQ86YR6 584 aa23.3■■□□□ 1.32
AFF1-210ENST00000514970 MAPK8IP2Q13387 824 aaPredicted RBP22.95■■□□□ 1.26
AFF1-210ENST00000514970 SCAF1Q9H7N4 1312 aaKnown RBP22.93■■□□□ 1.26
AFF1-210ENST00000514970 PPP4R3CPQ6ZMV5 832 aa22.84■■□□□ 1.25
AFF1-210ENST00000514970 DMRT2Q9Y5R5 561 aa22.67■■□□□ 1.22
AFF1-210ENST00000514970 CNKSR2Q8WXI2 1034 aa22.29■■□□□ 1.16
AFF1-210ENST00000514970 NCBP3Q53F19 620 aaKnown RBP22.07■■□□□ 1.12
AFF1-210ENST00000514970 CCDC180Q9P1Z9 1646 aa22.06■■□□□ 1.12
AFF1-210ENST00000514970 HOXD11P31277 338 aaPredicted RBP22.02■■□□□ 1.12
AFF1-210ENST00000514970 RNF216Q9NWF9 866 aaPredicted RBP21.97■■□□□ 1.11
AFF1-210ENST00000514970 NPM3O75607 178 aaKnown RBP21.78■■□□□ 1.08
AFF1-210ENST00000514970 KCNA4P22459 653 aa21.77■■□□□ 1.08
AFF1-210ENST00000514970 ABCC9O60706 1549 aa21.76■■□□□ 1.07
AFF1-210ENST00000514970 DCAF8L1A6NGE4 600 aa21.73■■□□□ 1.07
AFF1-210ENST00000514970 DNAJC5BQ9UF47 199 aa21.19■□□□□ 0.98
AFF1-210ENST00000514970 RNF39Q9H2S5 420 aa21.07■□□□□ 0.96
AFF1-210ENST00000514970 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.98■□□□□ 0.953e-7■■□□□ 13.9
AFF1-210ENST00000514970 CACNB1Q02641 598 aaPredicted RBP20.87■□□□□ 0.93
AFF1-210ENST00000514970 RB1CC1Q8TDY2 1594 aa20.83■□□□□ 0.92
AFF1-210ENST00000514970 C1QBPQ07021 282 aaKnown RBP20.78■□□□□ 0.92
AFF1-210ENST00000514970 NACADO15069 1562 aa20.72■□□□□ 0.91
AFF1-210ENST00000514970 SLC4A2P04920 1241 aa20.7■□□□□ 0.9
AFF1-210ENST00000514970 DCAF8L2P0C7V8 631 aa20.63■□□□□ 0.89
AFF1-210ENST00000514970 SLC4A1APQ9BWU0 796 aaKnown RBP20.62■□□□□ 0.89
AFF1-210ENST00000514970 U3KPZ7 1027 aaPredicted RBP20.6■□□□□ 0.89
AFF1-210ENST00000514970 UNC13AQ9UPW8 1703 aa20.49■□□□□ 0.87
AFF1-210ENST00000514970 ZCCHC6Q5VYS8 1495 aaKnown RBP20.48■□□□□ 0.87
AFF1-210ENST00000514970 MYO15BQ96JP2 1530 aa20.48■□□□□ 0.87
AFF1-210ENST00000514970 DCAF1Q9Y4B6 1507 aa20.32■□□□□ 0.84
AFF1-210ENST00000514970 PABPN1Q86U42 306 aaKnown RBP eCLIP20.25■□□□□ 0.83
AFF1-210ENST00000514970 BICRAQ9NZM4 1560 aa20.24■□□□□ 0.83
AFF1-210ENST00000514970 SPINK5Q9NQ38 1064 aaPredicted RBP20.18■□□□□ 0.82
AFF1-210ENST00000514970 FOXD4L1Q9NU39 408 aa20.15■□□□□ 0.82
AFF1-210ENST00000514970 SCRIBQ14160 1630 aa20.14■□□□□ 0.81
AFF1-210ENST00000514970 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.13■□□□□ 0.81
AFF1-210ENST00000514970 HNRNPUL2Q1KMD3 747 aaKnown RBP20.13■□□□□ 0.81
AFF1-210ENST00000514970 CAPN15O75808 1086 aa20.11■□□□□ 0.81
AFF1-210ENST00000514970 MYCNP04198 464 aaPredicted RBP20.11■□□□□ 0.81
AFF1-210ENST00000514970 SAMD1Q6SPF0 538 aaPredicted RBP20.05■□□□□ 0.8
AFF1-210ENST00000514970 ZBTB22O15209 634 aa20.03■□□□□ 0.8
AFF1-210ENST00000514970 APLP2Q06481 763 aa20.02■□□□□ 0.8
AFF1-210ENST00000514970 SHROOM4Q9ULL8 1493 aa19.92■□□□□ 0.78
AFF1-210ENST00000514970 TRHP20396 242 aaPredicted RBP19.9■□□□□ 0.78
AFF1-210ENST00000514970 DSG3P32926 999 aa19.9■□□□□ 0.78
AFF1-210ENST00000514970 ZNF219Q9P2Y4 722 aaPredicted RBP19.85■□□□□ 0.77
AFF1-210ENST00000514970 EIF4G1Q04637 1599 aaKnown RBP19.7■□□□□ 0.74
AFF1-210ENST00000514970 CC2D2AQ9P2K1 1620 aa19.69■□□□□ 0.74
AFF1-210ENST00000514970 ABCB7O75027 752 aa19.69■□□□□ 0.74
AFF1-210ENST00000514970 ATF5Q9Y2D1 282 aaPredicted RBP19.66■□□□□ 0.74
AFF1-210ENST00000514970 CECR2Q9BXF3 1484 aa19.55■□□□□ 0.72
AFF1-210ENST00000514970 CSRNP3Q8WYN3 585 aa19.52■□□□□ 0.72
AFF1-210ENST00000514970 EHMT2Q96KQ7 1210 aa19.5■□□□□ 0.71
AFF1-210ENST00000514970 ATXN8OSP0DMR3 200 aa19.48■□□□□ 0.71
AFF1-210ENST00000514970 POLA2Q14181 598 aa19.47■□□□□ 0.71
AFF1-210ENST00000514970 SMARCA4P51532 1647 aa19.21■□□□□ 0.67
AFF1-210ENST00000514970 BAZ1AQ9NRL2 1556 aaPredicted RBP19.1■□□□□ 0.65
AFF1-210ENST00000514970 ATAD2BQ9ULI0 1458 aa19.09■□□□□ 0.65
AFF1-210ENST00000514970 NCAPD3P42695 1498 aa19.08■□□□□ 0.64
AFF1-210ENST00000514970 SMARCA2P51531 1590 aa19.07■□□□□ 0.64
AFF1-210ENST00000514970 ZBTB12Q9Y330 459 aaPredicted RBP19.06■□□□□ 0.64
AFF1-210ENST00000514970 HMGXB3Q12766 1538 aa19.03■□□□□ 0.64
AFF1-210ENST00000514970 MROH2BQ7Z745 1585 aa19■□□□□ 0.63
AFF1-210ENST00000514970 PEG3Q9GZU2 1588 aa18.98■□□□□ 0.63
AFF1-210ENST00000514970 BAZ1BQ9UIG0 1483 aaKnown RBP18.95■□□□□ 0.62
AFF1-210ENST00000514970 RBM42Q9BTD8 480 aaKnown RBP18.93■□□□□ 0.62
AFF1-210ENST00000514970 WIZO95785 1651 aa18.85■□□□□ 0.61
AFF1-210ENST00000514970 OSCARQ8IYS5 282 aa18.82■□□□□ 0.6
AFF1-210ENST00000514970 FBLN2P98095 1184 aa18.8■□□□□ 0.6
AFF1-210ENST00000514970 NESP48681 1621 aa18.78■□□□□ 0.6
AFF1-210ENST00000514970 MKRN4PQ13434 485 aaPredicted RBP18.77■□□□□ 0.6
AFF1-210ENST00000514970 ERCC6Q03468 1493 aa18.77■□□□□ 0.59
AFF1-210ENST00000514970 LAMC3Q9Y6N6 1575 aa18.68■□□□□ 0.58
AFF1-210ENST00000514970 RSF1Q96T23 1441 aaPredicted RBP18.66■□□□□ 0.58
AFF1-210ENST00000514970 KIF21AQ7Z4S6 1674 aa18.63■□□□□ 0.57
AFF1-210ENST00000514970 CUX2O14529 1486 aa18.61■□□□□ 0.57
AFF1-210ENST00000514970 AKT1S1Q96B36 256 aa18.61■□□□□ 0.57
AFF1-210ENST00000514970 THOC2Q8NI27 1593 aaKnown RBP18.58■□□□□ 0.56
AFF1-210ENST00000514970 TOP2AP11388 1531 aaKnown RBP18.58■□□□□ 0.56
AFF1-210ENST00000514970 SPDYE2BA6NHP3 402 aa18.53■□□□□ 0.56
AFF1-210ENST00000514970 SPDYE6P0CI01 402 aa18.53■□□□□ 0.56
AFF1-210ENST00000514970 SPDYE2Q495Y8 402 aa18.53■□□□□ 0.56
AFF1-210ENST00000514970 CADPSQ9ULU8 1353 aa18.51■□□□□ 0.55
AFF1-210ENST00000514970 PDS5BQ9NTI5 1447 aa18.5■□□□□ 0.55
AFF1-210ENST00000514970 REM2Q8IYK8 340 aaPredicted RBP18.45■□□□□ 0.54
AFF1-210ENST00000514970 ZNF692Q9BU19 519 aaPredicted RBP18.4■□□□□ 0.54
AFF1-210ENST00000514970 PRDM2Q13029 1718 aa18.38■□□□□ 0.53
AFF1-210ENST00000514970 CFTRP13569 1480 aa18.38■□□□□ 0.53
AFF1-210ENST00000514970 MRC2Q9UBG0 1479 aa18.37■□□□□ 0.53
AFF1-210ENST00000514970 CHRDL2Q6WN34 429 aa18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms