Protein–RNA interactions for Protein: P02654

APOC1, Apolipoprotein C-I, humanhuman

Predictions only

Length 83 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1P02654 AL022069.1-201ENST00000568025 1636 ntBASIC20.09■□□□□ 0.81
APOC1P02654 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
APOC1P02654 CD37-213ENST00000598095 1598 ntTSL 2 BASIC20.08■□□□□ 0.81
APOC1P02654 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC20.08■□□□□ 0.81
APOC1P02654 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
APOC1P02654 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC20.08■□□□□ 0.81
APOC1P02654 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC20.08■□□□□ 0.81
APOC1P02654 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
APOC1P02654 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC20.08■□□□□ 0.81
APOC1P02654 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
APOC1P02654 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC20.08■□□□□ 0.8
APOC1P02654 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
APOC1P02654 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC20.07■□□□□ 0.8
APOC1P02654 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
APOC1P02654 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
APOC1P02654 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC20.07■□□□□ 0.8
APOC1P02654 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
APOC1P02654 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
APOC1P02654 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
APOC1P02654 ATP5G2P3-201ENST00000429083 425 ntBASIC20.07■□□□□ 0.8
APOC1P02654 STK32C-205ENST00000456004 607 ntTSL 2 BASIC20.07■□□□□ 0.8
APOC1P02654 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
APOC1P02654 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
APOC1P02654 AC079834.2-201ENST00000609776 1949 ntBASIC20.07■□□□□ 0.8
APOC1P02654 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
APOC1P02654 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC20.07■□□□□ 0.8
APOC1P02654 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
APOC1P02654 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
APOC1P02654 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
APOC1P02654 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
APOC1P02654 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
APOC1P02654 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
APOC1P02654 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC20.06■□□□□ 0.8
APOC1P02654 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC20.06■□□□□ 0.8
APOC1P02654 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
APOC1P02654 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
APOC1P02654 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
APOC1P02654 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
APOC1P02654 ABCB10P4-201ENST00000566803 2184 ntBASIC20.05■□□□□ 0.8
APOC1P02654 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
APOC1P02654 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC20.05■□□□□ 0.8
APOC1P02654 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
APOC1P02654 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
APOC1P02654 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
APOC1P02654 TSPY13P-201ENST00000338964 914 ntBASIC20.05■□□□□ 0.8
APOC1P02654 IDNK-201ENST00000376417 511 ntTSL 5 BASIC20.05■□□□□ 0.8
APOC1P02654 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
APOC1P02654 AC004987.1-201ENST00000428627 508 ntBASIC20.05■□□□□ 0.8
APOC1P02654 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
APOC1P02654 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
APOC1P02654 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
APOC1P02654 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC20.05■□□□□ 0.8
APOC1P02654 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC20.05■□□□□ 0.8
APOC1P02654 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
APOC1P02654 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC20.04■□□□□ 0.8
APOC1P02654 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC20.04■□□□□ 0.8
APOC1P02654 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC20.04■□□□□ 0.8
APOC1P02654 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
APOC1P02654 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
APOC1P02654 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
APOC1P02654 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC20.04■□□□□ 0.8
APOC1P02654 GAK-223ENST00000628912 497 ntTSL 5 BASIC20.04■□□□□ 0.8
APOC1P02654 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
APOC1P02654 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
APOC1P02654 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
APOC1P02654 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC20.04■□□□□ 0.8
APOC1P02654 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
APOC1P02654 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC20.03■□□□□ 0.8
APOC1P02654 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
APOC1P02654 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
APOC1P02654 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
APOC1P02654 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC20.03■□□□□ 0.8
APOC1P02654 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
APOC1P02654 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
APOC1P02654 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC20.03■□□□□ 0.8
APOC1P02654 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
APOC1P02654 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
APOC1P02654 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
APOC1P02654 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
APOC1P02654 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
APOC1P02654 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC20.02■□□□□ 0.8
APOC1P02654 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC20.02■□□□□ 0.8
APOC1P02654 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC20.02■□□□□ 0.8
APOC1P02654 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
APOC1P02654 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
APOC1P02654 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
APOC1P02654 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC20.01■□□□□ 0.79
APOC1P02654 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
APOC1P02654 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
APOC1P02654 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
APOC1P02654 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
APOC1P02654 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC20.01■□□□□ 0.79
APOC1P02654 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
APOC1P02654 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
APOC1P02654 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC20.01■□□□□ 0.79
APOC1P02654 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC20.01■□□□□ 0.79
APOC1P02654 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC20.01■□□□□ 0.79
APOC1P02654 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC20.01■□□□□ 0.79
APOC1P02654 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
APOC1P02654 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC20.01■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms