Protein–RNA interactions for Protein: O75909

CCNK, Cyclin-K, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNKO75909 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CCNKO75909 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CCNKO75909 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
CCNKO75909 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCNKO75909 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CCNKO75909 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCNKO75909 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCNKO75909 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCNKO75909 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCNKO75909 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC19.81■□□□□ 0.76
CCNKO75909 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCNKO75909 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCNKO75909 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCNKO75909 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC19.8■□□□□ 0.76
CCNKO75909 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC19.8■□□□□ 0.76
CCNKO75909 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CCNKO75909 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
CCNKO75909 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCNKO75909 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCNKO75909 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCNKO75909 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC19.79■□□□□ 0.76
CCNKO75909 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCNKO75909 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCNKO75909 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC19.79■□□□□ 0.76
CCNKO75909 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
CCNKO75909 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCNKO75909 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC19.79■□□□□ 0.76
CCNKO75909 MIR762-201ENST00000390236 83 ntBASIC19.79■□□□□ 0.76
CCNKO75909 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCNKO75909 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC19.79■□□□□ 0.76
CCNKO75909 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCNKO75909 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCNKO75909 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCNKO75909 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CCNKO75909 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CCNKO75909 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC19.78■□□□□ 0.76
CCNKO75909 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
CCNKO75909 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CCNKO75909 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC19.78■□□□□ 0.76
CCNKO75909 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CCNKO75909 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CCNKO75909 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CCNKO75909 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CCNKO75909 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
CCNKO75909 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
CCNKO75909 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
CCNKO75909 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC19.77■□□□□ 0.76
CCNKO75909 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
CCNKO75909 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CCNKO75909 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CCNKO75909 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CCNKO75909 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CCNKO75909 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC19.77■□□□□ 0.76
CCNKO75909 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
CCNKO75909 RPS2-209ENST00000529806 993 ntTSL 3 BASIC19.77■□□□□ 0.76
CCNKO75909 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CCNKO75909 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC19.77■□□□□ 0.76
CCNKO75909 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC19.77■□□□□ 0.75
CCNKO75909 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CCNKO75909 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CCNKO75909 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
CCNKO75909 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CCNKO75909 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
CCNKO75909 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CCNKO75909 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC19.76■□□□□ 0.75
CCNKO75909 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
CCNKO75909 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
CCNKO75909 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC19.75■□□□□ 0.75
CCNKO75909 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCNKO75909 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCNKO75909 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CCNKO75909 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC19.75■□□□□ 0.75
CCNKO75909 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCNKO75909 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC19.75■□□□□ 0.75
CCNKO75909 AC097358.2-201ENST00000607541 1159 ntBASIC19.75■□□□□ 0.75
CCNKO75909 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCNKO75909 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCNKO75909 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCNKO75909 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CCNKO75909 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC19.75■□□□□ 0.75
CCNKO75909 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCNKO75909 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCNKO75909 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC19.74■□□□□ 0.75
CCNKO75909 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCNKO75909 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
CCNKO75909 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
CCNKO75909 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CCNKO75909 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCNKO75909 LINC00273-201ENST00000539813 1452 ntBASIC19.73■□□□□ 0.75
CCNKO75909 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC19.73■□□□□ 0.75
CCNKO75909 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCNKO75909 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CCNKO75909 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC19.73■□□□□ 0.75
CCNKO75909 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC19.73■□□□□ 0.75
CCNKO75909 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC19.73■□□□□ 0.75
CCNKO75909 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CCNKO75909 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCNKO75909 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCNKO75909 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCNKO75909 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC19.73■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 16.3 ms