Protein–RNA interactions for Protein: Q9UHD9

UBQLN2, Ubiquilin-2, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN2Q9UHD9 AMT-201ENST00000273588 2280 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
UBQLN2Q9UHD9 ZFP64-203ENST00000361387 2545 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
UBQLN2Q9UHD9 AC015921.1-201ENST00000574885 2546 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
UBQLN2Q9UHD9 C17orf53-203ENST00000585683 2529 ntAPPRIS ALT2 TSL 2 BASIC12.7□□□□□ -0.38
UBQLN2Q9UHD9 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
UBQLN2Q9UHD9 LINC00865-202ENST00000448963 4272 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
UBQLN2Q9UHD9 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
UBQLN2Q9UHD9 AL590644.1-201ENST00000412427 4676 ntTSL 4 BASIC12.7□□□□□ -0.38
UBQLN2Q9UHD9 DNM1P41-201ENST00000623634 3350 ntBASIC12.7□□□□□ -0.38
UBQLN2Q9UHD9 DAZL-201ENST00000250863 3104 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
UBQLN2Q9UHD9 RAB11FIP1-202ENST00000330843 7811 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
UBQLN2Q9UHD9 RRBP1-201ENST00000246043 4737 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
UBQLN2Q9UHD9 LRRFIP2-202ENST00000354379 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
UBQLN2Q9UHD9 SLC9B1-201ENST00000296422 1879 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
UBQLN2Q9UHD9 TMEM121B-202ENST00000399875 3961 ntAPPRIS ALT2 TSL 2 BASIC12.7□□□□□ -0.38
UBQLN2Q9UHD9 SEMA7A-202ENST00000542748 3228 ntTSL 5 BASIC12.69□□□□□ -0.38
UBQLN2Q9UHD9 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
UBQLN2Q9UHD9 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
UBQLN2Q9UHD9 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
UBQLN2Q9UHD9 LRRC17-201ENST00000249377 2002 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
UBQLN2Q9UHD9 ZFAND3-201ENST00000287218 3366 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
UBQLN2Q9UHD9 RGS22-201ENST00000360863 4296 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
UBQLN2Q9UHD9 PPME1-201ENST00000328257 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
UBQLN2Q9UHD9 EWSAT1-201ENST00000415504 2214 ntTSL 2 BASIC12.69□□□□□ -0.38
UBQLN2Q9UHD9 STXBP1-201ENST00000373299 3765 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
UBQLN2Q9UHD9 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
UBQLN2Q9UHD9 NALCN-AS1-201ENST00000457843 2846 ntTSL 2 BASIC12.69□□□□□ -0.38
UBQLN2Q9UHD9 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC12.69□□□□□ -0.38
UBQLN2Q9UHD9 MECP2-217ENST00000628176 1712 ntTSL 3 BASIC12.69□□□□□ -0.38
UBQLN2Q9UHD9 NECAP2-202ENST00000443980 1929 ntTSL 2 BASIC12.69□□□□□ -0.38
UBQLN2Q9UHD9 HPS3-201ENST00000296051 4665 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
UBQLN2Q9UHD9 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
UBQLN2Q9UHD9 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC12.69□□□□□ -0.38
UBQLN2Q9UHD9 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC12.69□□□□□ -0.38
UBQLN2Q9UHD9 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC12.69□□□□□ -0.38
UBQLN2Q9UHD9 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC12.69□□□□□ -0.38
UBQLN2Q9UHD9 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC12.69□□□□□ -0.38
UBQLN2Q9UHD9 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
UBQLN2Q9UHD9 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC12.69□□□□□ -0.38
UBQLN2Q9UHD9 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC12.69□□□□□ -0.38
UBQLN2Q9UHD9 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
UBQLN2Q9UHD9 ALOX15B-202ENST00000380183 2739 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
UBQLN2Q9UHD9 SOGA3-207ENST00000481848 11464 ntAPPRIS P5 TSL 5 BASIC12.69□□□□□ -0.38
UBQLN2Q9UHD9 PIP5K1B-208ENST00000541509 2664 ntTSL 2 BASIC12.69□□□□□ -0.38
UBQLN2Q9UHD9 PCDHGB3-201ENST00000576222 4727 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
UBQLN2Q9UHD9 PCDHB10-201ENST00000239446 3290 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
UBQLN2Q9UHD9 NFATC1-204ENST00000397790 3453 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
UBQLN2Q9UHD9 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
UBQLN2Q9UHD9 TRIM80P-201ENST00000455685 2848 ntBASIC12.69□□□□□ -0.38
UBQLN2Q9UHD9 SPATS2-201ENST00000321898 3158 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
UBQLN2Q9UHD9 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
UBQLN2Q9UHD9 PRKAR2A-202ENST00000296446 3318 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
UBQLN2Q9UHD9 NFATC2-202ENST00000396009 7437 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
UBQLN2Q9UHD9 ELN-211ENST00000414324 3139 ntAPPRIS ALT2 TSL 2 BASIC12.68□□□□□ -0.38
UBQLN2Q9UHD9 CACNA1G-214ENST00000505165 6633 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
UBQLN2Q9UHD9 ADGRG3-201ENST00000333493 2728 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
UBQLN2Q9UHD9 IRF6-204ENST00000542854 4256 ntTSL 2 BASIC12.68□□□□□ -0.38
UBQLN2Q9UHD9 RIMS1-218ENST00000522291 3876 ntTSL 5 BASIC12.68□□□□□ -0.38
UBQLN2Q9UHD9 RRM2B-211ENST00000621845 3483 ntTSL 2 BASIC12.68□□□□□ -0.38
UBQLN2Q9UHD9 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC12.68□□□□□ -0.38
UBQLN2Q9UHD9 RMDN1-201ENST00000406452 3063 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
UBQLN2Q9UHD9 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
UBQLN2Q9UHD9 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
UBQLN2Q9UHD9 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
UBQLN2Q9UHD9 PDE9A-201ENST00000291539 2058 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
UBQLN2Q9UHD9 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC12.68□□□□□ -0.38
UBQLN2Q9UHD9 USP6NL-205ENST00000609104 11377 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
UBQLN2Q9UHD9 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC12.68□□□□□ -0.38
UBQLN2Q9UHD9 SUCO-202ENST00000367723 5916 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
UBQLN2Q9UHD9 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
UBQLN2Q9UHD9 TMEM248-201ENST00000341567 4229 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
UBQLN2Q9UHD9 SMC4-202ENST00000357388 5471 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
UBQLN2Q9UHD9 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
UBQLN2Q9UHD9 POTEM-201ENST00000547889 1817 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
UBQLN2Q9UHD9 ARAP3-203ENST00000508305 4927 ntTSL 2 BASIC12.68□□□□□ -0.38
UBQLN2Q9UHD9 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
UBQLN2Q9UHD9 VMO1-203ENST00000416307 712 ntTSL 2 BASIC12.68□□□□□ -0.38
UBQLN2Q9UHD9 ATP6V0CP3-201ENST00000417255 467 ntBASIC12.68□□□□□ -0.38
UBQLN2Q9UHD9 AC023274.1-201ENST00000418278 595 ntBASIC12.68□□□□□ -0.38
UBQLN2Q9UHD9 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC12.68□□□□□ -0.38
UBQLN2Q9UHD9 AL591424.1-201ENST00000442569 1213 ntBASIC12.68□□□□□ -0.38
UBQLN2Q9UHD9 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
UBQLN2Q9UHD9 KRT18P2-201ENST00000447938 1258 ntBASIC12.68□□□□□ -0.38
UBQLN2Q9UHD9 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
UBQLN2Q9UHD9 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC12.68□□□□□ -0.38
UBQLN2Q9UHD9 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC12.68□□□□□ -0.38
UBQLN2Q9UHD9 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC12.68□□□□□ -0.38
UBQLN2Q9UHD9 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC12.68□□□□□ -0.38
UBQLN2Q9UHD9 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC12.68□□□□□ -0.38
UBQLN2Q9UHD9 NME1-209ENST00000511355 1645 ntTSL 5 BASIC12.68□□□□□ -0.38
UBQLN2Q9UHD9 SEZ6L-206ENST00000404234 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
UBQLN2Q9UHD9 BAHD1-203ENST00000561234 4698 ntAPPRIS ALT1 TSL 1 (best) BASIC12.68□□□□□ -0.38
UBQLN2Q9UHD9 TWSG1-201ENST00000262120 3756 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
UBQLN2Q9UHD9 NF1-204ENST00000431387 2889 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
UBQLN2Q9UHD9 RAB40A-201ENST00000304236 1969 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
UBQLN2Q9UHD9 SF1-209ENST00000433274 2317 ntTSL 2 BASIC12.68□□□□□ -0.38
UBQLN2Q9UHD9 ARID3B-206ENST00000622429 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
UBQLN2Q9UHD9 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
UBQLN2Q9UHD9 GSE1-203ENST00000405402 4366 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
UBQLN2Q9UHD9 MTSS1-201ENST00000325064 2777 ntTSL 2 BASIC12.68□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 113.2 ms