Protein–RNA interactions for Protein: Q9NUP7

TRMT13, tRNA:m(4)X modification enzyme TRM13 homolog, humanhuman

Known RBP Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRMT13Q9NUP7 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC16.22■□□□□ 0.19
TRMT13Q9NUP7 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
TRMT13Q9NUP7 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC16.22■□□□□ 0.19
TRMT13Q9NUP7 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
TRMT13Q9NUP7 CNN1-201ENST00000252456 1633 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRMT13Q9NUP7 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC16.22■□□□□ 0.19
TRMT13Q9NUP7 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRMT13Q9NUP7 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRMT13Q9NUP7 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRMT13Q9NUP7 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRMT13Q9NUP7 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRMT13Q9NUP7 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TRMT13Q9NUP7 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
TRMT13Q9NUP7 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TRMT13Q9NUP7 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC16.22■□□□□ 0.19
TRMT13Q9NUP7 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRMT13Q9NUP7 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRMT13Q9NUP7 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
TRMT13Q9NUP7 KRT18P9-201ENST00000604826 1300 ntBASIC16.21■□□□□ 0.19
TRMT13Q9NUP7 AC008741.2-201ENST00000612792 3115 ntBASIC16.21■□□□□ 0.19
TRMT13Q9NUP7 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
TRMT13Q9NUP7 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRMT13Q9NUP7 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC16.21■□□□□ 0.19
TRMT13Q9NUP7 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
TRMT13Q9NUP7 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRMT13Q9NUP7 ENO3-202ENST00000518175 1448 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRMT13Q9NUP7 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
TRMT13Q9NUP7 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
TRMT13Q9NUP7 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRMT13Q9NUP7 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC16.21■□□□□ 0.19
TRMT13Q9NUP7 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRMT13Q9NUP7 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC16.21■□□□□ 0.19
TRMT13Q9NUP7 MAP2K6-205ENST00000589647 1512 ntTSL 5 BASIC16.21■□□□□ 0.19
TRMT13Q9NUP7 C16orf45-209ENST00000566490 1854 ntTSL 5 BASIC16.21■□□□□ 0.19
TRMT13Q9NUP7 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRMT13Q9NUP7 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC16.21■□□□□ 0.19
TRMT13Q9NUP7 CGB1-201ENST00000301407 573 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRMT13Q9NUP7 RNASE10-201ENST00000328444 717 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
TRMT13Q9NUP7 RNA5SP359-201ENST00000364838 113 ntBASIC16.21■□□□□ 0.19
TRMT13Q9NUP7 TSPY25P-201ENST00000429463 745 ntBASIC16.21■□□□□ 0.19
TRMT13Q9NUP7 RPSAP15-201ENST00000448168 861 ntBASIC16.21■□□□□ 0.19
TRMT13Q9NUP7 AC040162.4-201ENST00000574912 1185 ntAPPRIS P1 TSL 3 BASIC16.21■□□□□ 0.19
TRMT13Q9NUP7 AC061992.1-201ENST00000592569 777 ntTSL 3 BASIC16.21■□□□□ 0.19
TRMT13Q9NUP7 ADH5-213ENST00000626055 1299 ntTSL 5 BASIC16.21■□□□□ 0.19
TRMT13Q9NUP7 PRKAB1-210ENST00000630317 258 ntTSL 2 BASIC16.21■□□□□ 0.19
TRMT13Q9NUP7 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRMT13Q9NUP7 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRMT13Q9NUP7 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRMT13Q9NUP7 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC16.21■□□□□ 0.19
TRMT13Q9NUP7 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRMT13Q9NUP7 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRMT13Q9NUP7 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC16.21■□□□□ 0.19
TRMT13Q9NUP7 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRMT13Q9NUP7 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC16.21■□□□□ 0.19
TRMT13Q9NUP7 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
TRMT13Q9NUP7 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
TRMT13Q9NUP7 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
TRMT13Q9NUP7 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.18
TRMT13Q9NUP7 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
TRMT13Q9NUP7 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
TRMT13Q9NUP7 ASCC2-201ENST00000307790 2793 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
TRMT13Q9NUP7 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC16.21■□□□□ 0.18
TRMT13Q9NUP7 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
TRMT13Q9NUP7 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC16.21■□□□□ 0.18
TRMT13Q9NUP7 AMHR2-201ENST00000257863 1863 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRMT13Q9NUP7 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TRMT13Q9NUP7 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRMT13Q9NUP7 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TRMT13Q9NUP7 AC025271.4-201ENST00000621477 1726 ntBASIC16.2■□□□□ 0.18
TRMT13Q9NUP7 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC16.2■□□□□ 0.18
TRMT13Q9NUP7 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRMT13Q9NUP7 PON3-201ENST00000265627 1105 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRMT13Q9NUP7 PSMB10-201ENST00000358514 1218 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRMT13Q9NUP7 APOA1-202ENST00000359492 932 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
TRMT13Q9NUP7 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
TRMT13Q9NUP7 HDDC2-202ENST00000398153 918 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRMT13Q9NUP7 SLC13A3-205ENST00000417157 876 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TRMT13Q9NUP7 AL807761.2-201ENST00000422849 729 ntBASIC16.2■□□□□ 0.18
TRMT13Q9NUP7 AL627422.1-201ENST00000434104 580 ntBASIC16.2■□□□□ 0.18
TRMT13Q9NUP7 AL591242.1-203ENST00000434329 374 ntTSL 3 BASIC16.2■□□□□ 0.18
TRMT13Q9NUP7 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TRMT13Q9NUP7 PGAP2-212ENST00000464906 1259 ntTSL 2 BASIC16.2■□□□□ 0.18
TRMT13Q9NUP7 GLYCTK-204ENST00000471180 992 ntTSL 2 BASIC16.2■□□□□ 0.18
TRMT13Q9NUP7 LRRC75A-AS1-209ENST00000481027 1016 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TRMT13Q9NUP7 LINC02380-201ENST00000510956 1038 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TRMT13Q9NUP7 PCMTD1-207ENST00000522514 1287 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
TRMT13Q9NUP7 AP000842.2-201ENST00000533033 517 ntTSL 4 BASIC16.2■□□□□ 0.18
TRMT13Q9NUP7 C12orf10-207ENST00000549488 840 ntTSL 5 BASIC16.2■□□□□ 0.18
TRMT13Q9NUP7 AC025154.2-201ENST00000550530 445 ntTSL 3 BASIC16.2■□□□□ 0.18
TRMT13Q9NUP7 AL356756.1-201ENST00000550941 551 ntTSL 3 BASIC16.2■□□□□ 0.18
TRMT13Q9NUP7 AC093752.3-201ENST00000567343 901 ntBASIC16.2■□□□□ 0.18
TRMT13Q9NUP7 LRRC75A-AS1-226ENST00000582911 879 ntTSL 5 BASIC16.2■□□□□ 0.18
TRMT13Q9NUP7 PLIN5-202ENST00000586133 907 ntTSL 3 BASIC16.2■□□□□ 0.18
TRMT13Q9NUP7 AC007326.1-201ENST00000604539 458 ntBASIC16.2■□□□□ 0.18
TRMT13Q9NUP7 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC16.2■□□□□ 0.18
TRMT13Q9NUP7 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRMT13Q9NUP7 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC16.2■□□□□ 0.18
TRMT13Q9NUP7 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRMT13Q9NUP7 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TRMT13Q9NUP7 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 96.9 ms