Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC12.65□□□□□ -0.38
RTN4IP1Q8WWV3 KCTD7-201ENST00000275532 4795 ntTSL 4 BASIC12.65□□□□□ -0.38
RTN4IP1Q8WWV3 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
RTN4IP1Q8WWV3 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
RTN4IP1Q8WWV3 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
RTN4IP1Q8WWV3 LILRP1-201ENST00000444199 1370 ntBASIC12.65□□□□□ -0.38
RTN4IP1Q8WWV3 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
RTN4IP1Q8WWV3 C8orf49-201ENST00000525043 1968 ntBASIC12.65□□□□□ -0.38
RTN4IP1Q8WWV3 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
RTN4IP1Q8WWV3 MKL1-202ENST00000396617 4505 ntTSL 1 (best) BASIC12.65□□□□□ -0.39
RTN4IP1Q8WWV3 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC12.65□□□□□ -0.39
RTN4IP1Q8WWV3 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.39
RTN4IP1Q8WWV3 CABLES2-201ENST00000279101 3785 ntAPPRIS P2 TSL 5 BASIC12.65□□□□□ -0.39
RTN4IP1Q8WWV3 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
RTN4IP1Q8WWV3 CORO7-201ENST00000251166 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
RTN4IP1Q8WWV3 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
RTN4IP1Q8WWV3 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
RTN4IP1Q8WWV3 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
RTN4IP1Q8WWV3 ATP2B3-201ENST00000263519 6420 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
RTN4IP1Q8WWV3 PEG13-201ENST00000631594 5667 ntBASIC12.64□□□□□ -0.39
RTN4IP1Q8WWV3 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC12.64□□□□□ -0.39
RTN4IP1Q8WWV3 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC12.64□□□□□ -0.39
RTN4IP1Q8WWV3 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
RTN4IP1Q8WWV3 SCUBE2-201ENST00000309263 3727 ntTSL 5 BASIC12.64□□□□□ -0.39
RTN4IP1Q8WWV3 AC005252.3-201ENST00000623855 2258 ntBASIC12.64□□□□□ -0.39
RTN4IP1Q8WWV3 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
RTN4IP1Q8WWV3 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
RTN4IP1Q8WWV3 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
RTN4IP1Q8WWV3 IGF2-203ENST00000381395 4527 ntAPPRIS P2 TSL 2 BASIC12.64□□□□□ -0.39
RTN4IP1Q8WWV3 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC12.64□□□□□ -0.39
RTN4IP1Q8WWV3 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC12.64□□□□□ -0.39
RTN4IP1Q8WWV3 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC12.64□□□□□ -0.39
RTN4IP1Q8WWV3 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
RTN4IP1Q8WWV3 NRP2-201ENST00000272849 5909 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
RTN4IP1Q8WWV3 MINDY4-201ENST00000265299 2733 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
RTN4IP1Q8WWV3 GRAMD4-202ENST00000406902 4484 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
RTN4IP1Q8WWV3 TET3-201ENST00000305799 5174 ntTSL 5 BASIC12.64□□□□□ -0.39
RTN4IP1Q8WWV3 TCHH-201ENST00000368804 6900 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
RTN4IP1Q8WWV3 EPHB3-201ENST00000330394 4236 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
RTN4IP1Q8WWV3 WASHC2C-201ENST00000336378 4669 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
RTN4IP1Q8WWV3 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC12.64□□□□□ -0.39
RTN4IP1Q8WWV3 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
RTN4IP1Q8WWV3 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC12.64□□□□□ -0.39
RTN4IP1Q8WWV3 PKIG-203ENST00000372887 769 ntTSL 3 BASIC12.64□□□□□ -0.39
RTN4IP1Q8WWV3 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC12.64□□□□□ -0.39
RTN4IP1Q8WWV3 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC12.64□□□□□ -0.39
RTN4IP1Q8WWV3 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC12.64□□□□□ -0.39
RTN4IP1Q8WWV3 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC12.64□□□□□ -0.39
RTN4IP1Q8WWV3 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
RTN4IP1Q8WWV3 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC12.64□□□□□ -0.39
RTN4IP1Q8WWV3 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC12.64□□□□□ -0.39
RTN4IP1Q8WWV3 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC12.64□□□□□ -0.39
RTN4IP1Q8WWV3 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC12.64□□□□□ -0.39
RTN4IP1Q8WWV3 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC12.64□□□□□ -0.39
RTN4IP1Q8WWV3 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
RTN4IP1Q8WWV3 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC12.64□□□□□ -0.39
RTN4IP1Q8WWV3 AQP6-203ENST00000551733 849 ntTSL 3 BASIC12.64□□□□□ -0.39
RTN4IP1Q8WWV3 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC12.64□□□□□ -0.39
RTN4IP1Q8WWV3 TBCB-211ENST00000589996 724 ntTSL 3 BASIC12.64□□□□□ -0.39
RTN4IP1Q8WWV3 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC12.64□□□□□ -0.39
RTN4IP1Q8WWV3 AC004840.1-201ENST00000636359 365 ntBASIC12.64□□□□□ -0.39
RTN4IP1Q8WWV3 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
RTN4IP1Q8WWV3 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
RTN4IP1Q8WWV3 VPS26B-201ENST00000281187 3691 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
RTN4IP1Q8WWV3 TARDBP-201ENST00000240185 5367 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
RTN4IP1Q8WWV3 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
RTN4IP1Q8WWV3 MCM9-202ENST00000316316 5101 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
RTN4IP1Q8WWV3 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
RTN4IP1Q8WWV3 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC12.64□□□□□ -0.39
RTN4IP1Q8WWV3 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
RTN4IP1Q8WWV3 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
RTN4IP1Q8WWV3 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
RTN4IP1Q8WWV3 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC12.64□□□□□ -0.39
RTN4IP1Q8WWV3 RAPGEF1-202ENST00000372190 6045 ntAPPRIS P4 TSL 1 (best) BASIC12.64□□□□□ -0.39
RTN4IP1Q8WWV3 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC12.64□□□□□ -0.39
RTN4IP1Q8WWV3 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
RTN4IP1Q8WWV3 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
RTN4IP1Q8WWV3 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
RTN4IP1Q8WWV3 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
RTN4IP1Q8WWV3 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC12.63□□□□□ -0.39
RTN4IP1Q8WWV3 E2F7-201ENST00000322886 5740 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
RTN4IP1Q8WWV3 MOB3C-203ENST00000371940 5725 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
RTN4IP1Q8WWV3 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC12.63□□□□□ -0.39
RTN4IP1Q8WWV3 MROH2A-201ENST00000389758 5355 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
RTN4IP1Q8WWV3 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC12.63□□□□□ -0.39
RTN4IP1Q8WWV3 CPSF1-212ENST00000616140 4494 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
RTN4IP1Q8WWV3 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
RTN4IP1Q8WWV3 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
RTN4IP1Q8WWV3 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
RTN4IP1Q8WWV3 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
RTN4IP1Q8WWV3 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
RTN4IP1Q8WWV3 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC12.63□□□□□ -0.39
RTN4IP1Q8WWV3 RET-205ENST00000615310 4337 ntTSL 5 BASIC12.63□□□□□ -0.39
RTN4IP1Q8WWV3 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC12.63□□□□□ -0.39
RTN4IP1Q8WWV3 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC12.63□□□□□ -0.39
RTN4IP1Q8WWV3 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC12.63□□□□□ -0.39
RTN4IP1Q8WWV3 NFIC-206ENST00000589123 8068 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
RTN4IP1Q8WWV3 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
RTN4IP1Q8WWV3 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
RTN4IP1Q8WWV3 FBXL16-201ENST00000324361 3411 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 63.4 ms